Definition Thermomicrobium roseum DSM 5159 plasmid unnamed, complete sequence.
Accession NC_011961
Length 917,738

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The map label for this gene is 221636061

Identifier: 221636061

GI number: 221636061

Start: 645649

End: 646149

Strand: Reverse

Name: 221636061

Synonym: trd_A0655

Alternate gene names: NA

Gene position: 646149-645649 (Counterclockwise)

Preceding gene: 221636062

Following gene: 221636060

Centisome position: 70.41

GC content: 66.27

Gene sequence:

>501_bases
TTGGCGATACCATTACTCGGTCGTGCTGGGAGCCTCCTGGTCGGACAGATCGTCTGGCGGCTGGTCCGGGACGATGAGCC
AGGGAAGGCGGTCGAGCGGGCGAGGTCGCTCGTTGCGCGCAGCGCGCCCGATGATCCTCACCGATCGCATGGTGCGTTGC
GACGCCGTGCTGGCGGTGGGTGGAGCCCTTCATGGTACGCTGGGTTTATGGTGATCGGACTCGTCTGTTCGATGCTTTCG
ATCCTGTTCGGCGGCCGTATGGTCACAGCAGGACTGGTGCGTGCGCCGTGGCTCTCGCGGGGCGAAGTGCTGGTCCTAGC
GCCGGTCGGATCACCGGTGGTCCGTGACGATCCGCTCGTCTGGTGCTGGCCTGATGGAGGGAACCTGTGGCTGCTCGCGG
GCAGTTCGACTGCGTTCAGCGTGGGCATGGCAGATTTCCCCCGGGTGTGGCGCGGTGTTCGGCGTTTTGCGGAACCCGCG
GCGACCGTGACGGCGCAGTAG

Upstream 100 bases:

>100_bases
ATCGTTCGTCCCCCTCCCCGCGACGCTGGGCGATCGTACCGGATCCGGCTGGAGGTGATCGCCCAGCGGGTCGCGTTCGG
CGACGCTGGTAGCGATCCGG

Downstream 100 bases:

>100_bases
AGGTGAGGAGGTACCCAGGATGTACATCGGACGTTTTCCCTATGGACGGTACGACCGGCCCCCACAACCGGACCTCACGC
TCGAGGATTTGCGGCGCGTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 166; Mature: 165

Protein sequence:

>166_residues
MAIPLLGRAGSLLVGQIVWRLVRDDEPGKAVERARSLVARSAPDDPHRSHGALRRRAGGGWSPSWYAGFMVIGLVCSMLS
ILFGGRMVTAGLVRAPWLSRGEVLVLAPVGSPVVRDDPLVWCWPDGGNLWLLAGSSTAFSVGMADFPRVWRGVRRFAEPA
ATVTAQ

Sequences:

>Translated_166_residues
MAIPLLGRAGSLLVGQIVWRLVRDDEPGKAVERARSLVARSAPDDPHRSHGALRRRAGGGWSPSWYAGFMVIGLVCSMLS
ILFGGRMVTAGLVRAPWLSRGEVLVLAPVGSPVVRDDPLVWCWPDGGNLWLLAGSSTAFSVGMADFPRVWRGVRRFAEPA
ATVTAQ
>Mature_165_residues
AIPLLGRAGSLLVGQIVWRLVRDDEPGKAVERARSLVARSAPDDPHRSHGALRRRAGGGWSPSWYAGFMVIGLVCSMLSI
LFGGRMVTAGLVRAPWLSRGEVLVLAPVGSPVVRDDPLVWCWPDGGNLWLLAGSSTAFSVGMADFPRVWRGVRRFAEPAA
TVTAQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17857; Mature: 17726

Theoretical pI: Translated: 11.63; Mature: 11.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAIPLLGRAGSLLVGQIVWRLVRDDEPGKAVERARSLVARSAPDDPHRSHGALRRRAGGG
CCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCC
WSPSWYAGFMVIGLVCSMLSILFGGRMVTAGLVRAPWLSRGEVLVLAPVGSPVVRDDPLV
CCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCEE
WCWPDGGNLWLLAGSSTAFSVGMADFPRVWRGVRRFAEPAATVTAQ
EEEECCCCEEEEECCCCEEECCCHHHHHHHHHHHHHHCCCHHCCCC
>Mature Secondary Structure 
AIPLLGRAGSLLVGQIVWRLVRDDEPGKAVERARSLVARSAPDDPHRSHGALRRRAGGG
CCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCC
WSPSWYAGFMVIGLVCSMLSILFGGRMVTAGLVRAPWLSRGEVLVLAPVGSPVVRDDPLV
CCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCEE
WCWPDGGNLWLLAGSSTAFSVGMADFPRVWRGVRRFAEPAATVTAQ
EEEECCCCEEEEECCCCEEECCCHHHHHHHHHHHHHHCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA