| Definition | Thermomicrobium roseum DSM 5159 plasmid unnamed, complete sequence. |
|---|---|
| Accession | NC_011961 |
| Length | 917,738 |
Click here to switch to the map view.
The map label for this gene is fliG [H]
Identifier: 221636056
GI number: 221636056
Start: 641515
End: 642549
Strand: Reverse
Name: fliG [H]
Synonym: trd_A0650
Alternate gene names: 221636056
Gene position: 642549-641515 (Counterclockwise)
Preceding gene: 221636057
Following gene: 221636055
Centisome position: 70.01
GC content: 64.35
Gene sequence:
>1035_bases ATGACAGCGCAACCGACCCTCCGCCAAGCGAACCAGGCGCAGCCACTCAAGGGGGCAGCCAAGGCGGCAGCACTGCTCAT GGCGTTGGGGCCCGACTTCTCCGCCAAGGTGCTGCAGCACCTGCAGGAGCACGAGATCGAGGCGATCACCGTGAAGGTGG CAACGATGCCACGCCTGAGCGAGGAGGAGGTCCGTCAAGTCCTCGACGAGGCGCACGAGATGGCTGTCGTCCACCGGTAT CTGGCGGTCGGTGGGATCGAATACGCGCGGGAGATGCTGGCCCGGGCGATGGGGCTAGAGCGGGCGAACGCGCTGATCGA TCGCGTGGTGACGATGAATCCACCGGCGCCATTCGAGTTCCTGCGCAAGTCGGATCCACGCCAAATGGCGATGTTCCTCC AGAACGAGCATCCGCAGACGATCGCCTTGATCCTCTCGCACCTGCCGCCCGTGCAGGCGGCCGCGGTGATCAGTCATCTC AACGAGGACTTGCAAGCTGAGGTCGCGCGGCGCATCGCGACGATCGATCGTACTCCCGCGGAGATCGTCAAGCGGGTGGA GGAGATCATGCGGCGGCGGATGTCCTCCCTCCTCACGCAGGATTCGCGGACCGTCGGTGGTGTCGCGCACCTGGTCGCGA TCCTGAGCAAGGTCGATCGCAGTACCGAGAAACACATTCTGGAGCGCTTGACCGAAGTCGATCCGATGCTGGCCGAAGAG GTTCGCAAGCTGATGTTCACGTTCGACGATTTGATCCTCCTGGACGATCGCTCGCTGCAACGCGTGCTGCGCGAGGTGGA CATGCGCGATCTGGCACTGGCCCTGAAGGCGGCGCGCGACGAGCTCAAGGAGAAGATTTTCCGCAACATGTCGCAGCGGG CAGCCGAACTGTTGCGCGAGGAGATCAGCTATCTGGGGCCAGTGCGCATCCGGGCGGTCGAGGAGGCGCAGCAGCGGATC GTCTCGATCGTGCGGCGGCTGGAGGAGGCGGAAGAGATCGTGATCTCGCGGGGCGAGGAGGCGATCCTTGGCTAG
Upstream 100 bases:
>100_bases CCTCCGCCGACACTGCGGGAATTGCAGGAGTTGGCGAAGAAGGATCCGGCGACGGTCGCCCACGTGGTCCGGGCCTGGTT GAACGAGGAGTGAAACGGCG
Downstream 100 bases:
>100_bases CGCTCGGGTGGTCAAGCGTCGCGAAGCGTCGACTGCGGGCGATACGCTGGTCGTCCCGCAGCCGTCACCGCACGACCGCG AGTTGGCCGTTCGTCTCCTC
Product: flagellar motor switch protein FliG
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 344; Mature: 343
Protein sequence:
>344_residues MTAQPTLRQANQAQPLKGAAKAAALLMALGPDFSAKVLQHLQEHEIEAITVKVATMPRLSEEEVRQVLDEAHEMAVVHRY LAVGGIEYAREMLARAMGLERANALIDRVVTMNPPAPFEFLRKSDPRQMAMFLQNEHPQTIALILSHLPPVQAAAVISHL NEDLQAEVARRIATIDRTPAEIVKRVEEIMRRRMSSLLTQDSRTVGGVAHLVAILSKVDRSTEKHILERLTEVDPMLAEE VRKLMFTFDDLILLDDRSLQRVLREVDMRDLALALKAARDELKEKIFRNMSQRAAELLREEISYLGPVRIRAVEEAQQRI VSIVRRLEEAEEIVISRGEEAILG
Sequences:
>Translated_344_residues MTAQPTLRQANQAQPLKGAAKAAALLMALGPDFSAKVLQHLQEHEIEAITVKVATMPRLSEEEVRQVLDEAHEMAVVHRY LAVGGIEYAREMLARAMGLERANALIDRVVTMNPPAPFEFLRKSDPRQMAMFLQNEHPQTIALILSHLPPVQAAAVISHL NEDLQAEVARRIATIDRTPAEIVKRVEEIMRRRMSSLLTQDSRTVGGVAHLVAILSKVDRSTEKHILERLTEVDPMLAEE VRKLMFTFDDLILLDDRSLQRVLREVDMRDLALALKAARDELKEKIFRNMSQRAAELLREEISYLGPVRIRAVEEAQQRI VSIVRRLEEAEEIVISRGEEAILG >Mature_343_residues TAQPTLRQANQAQPLKGAAKAAALLMALGPDFSAKVLQHLQEHEIEAITVKVATMPRLSEEEVRQVLDEAHEMAVVHRYL AVGGIEYAREMLARAMGLERANALIDRVVTMNPPAPFEFLRKSDPRQMAMFLQNEHPQTIALILSHLPPVQAAAVISHLN EDLQAEVARRIATIDRTPAEIVKRVEEIMRRRMSSLLTQDSRTVGGVAHLVAILSKVDRSTEKHILERLTEVDPMLAEEV RKLMFTFDDLILLDDRSLQRVLREVDMRDLALALKAARDELKEKIFRNMSQRAAELLREEISYLGPVRIRAVEEAQQRIV SIVRRLEEAEEIVISRGEEAILG
Specific function: One of the proteins that form a switch complex that is proposed to be located at the base of the basal body. This complex interacts with chemotaxis proteins (such as CheY) in addition to contacting components of the motor that determine the direction of f
COG id: COG1536
COG function: function code N; Flagellar motor switch protein
Gene ontology:
Cell location: Cell membrane; Peripheral membrane protein; Cytoplasmic side. Bacterial flagellum basal body (By similarity) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the FliG family [H]
Homologues:
Organism=Escherichia coli, GI1788249, Length=326, Percent_Identity=35.5828220858896, Blast_Score=192, Evalue=2e-50,
Paralogues:
None
Copy number: 10-20 (rich media) [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000090 - InterPro: IPR023087 - InterPro: IPR011002 [H]
Pfam domain/function: PF01706 FliG_C [H]
EC number: NA
Molecular weight: Translated: 38852; Mature: 38721
Theoretical pI: Translated: 6.27; Mature: 6.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAQPTLRQANQAQPLKGAAKAAALLMALGPDFSAKVLQHLQEHEIEAITVKVATMPRLS CCCCCCHHHCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHEEEEHHCCCCC EEEVRQVLDEAHEMAVVHRYLAVGGIEYAREMLARAMGLERANALIDRVVTMNPPAPFEF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH LRKSDPRQMAMFLQNEHPQTIALILSHLPPVQAAAVISHLNEDLQAEVARRIATIDRTPA HHCCCHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH EIVKRVEEIMRRRMSSLLTQDSRTVGGVAHLVAILSKVDRSTEKHILERLTEVDPMLAEE HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCHHHHHH VRKLMFTFDDLILLDDRSLQRVLREVDMRDLALALKAARDELKEKIFRNMSQRAAELLRE HHHHHHHHHHHHEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EISYLGPVRIRAVEEAQQRIVSIVRRLEEAEEIVISRGEEAILG HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCC >Mature Secondary Structure TAQPTLRQANQAQPLKGAAKAAALLMALGPDFSAKVLQHLQEHEIEAITVKVATMPRLS CCCCCHHHCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHEEEEHHCCCCC EEEVRQVLDEAHEMAVVHRYLAVGGIEYAREMLARAMGLERANALIDRVVTMNPPAPFEF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH LRKSDPRQMAMFLQNEHPQTIALILSHLPPVQAAAVISHLNEDLQAEVARRIATIDRTPA HHCCCHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH EIVKRVEEIMRRRMSSLLTQDSRTVGGVAHLVAILSKVDRSTEKHILERLTEVDPMLAEE HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCHHHHHH VRKLMFTFDDLILLDDRSLQRVLREVDMRDLALALKAARDELKEKIFRNMSQRAAELLRE HHHHHHHHHHHHEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EISYLGPVRIRAVEEAQQRIVSIVRRLEEAEEIVISRGEEAILG HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 10360571; 10440379 [H]