Click here to switch to the map view.

The map label for this gene is flgD [H]

Identifier: 221636049

GI number: 221636049

Start: 635672

End: 636112

Strand: Reverse

Name: flgD [H]

Synonym: trd_A0643

Alternate gene names: 221636049

Gene position: 636112-635672 (Counterclockwise)

Preceding gene: 221636050

Following gene: 221636048

Centisome position: 69.31

GC content: 65.99

Gene sequence:

>441_bases
GTGAGCGACTCGAACGGTCCGGTGACGACGAACCCATTATCGTCCGGCGGCGGTGTGGGCCCCGGTGGCCAACTGGACAA
GCAGGCGTTCCTCATGCTCCTGGTCGCCCAGCTCAAGAACCAGGACCCGATGAATCCGATGCAGGACCGGGAGTTCATCG
CGCAGCTCGCCCAGCTGAACACGCTGGAGCAGCTGCAGCAGTTGAACGAGACGGTGGCGGCGATGGCGCAGCATGCGGCG
CTGGGACAGGTGGCTGGGTATCTGGGTCGGGTGGTGAGTGGTCTGGACCGGACGAGTGGCGACCTGGTAACTGGCACAGT
GGTGCGCGCGACCATCCTGGACGGTGCCGCAGTGCTCGAGCTCTCCGGTGGGCAGCGGATCGACGTGCGCGACGTGGTGA
GCATCGGATTAGCGGGAGCTGGTTCGGGCAGCGGGGAATGA

Upstream 100 bases:

>100_bases
CCGGTGGTAGGGGACTCCCGAGGGCGAGTGCGCCAGGAGTCGAGCGGACTCGTGGACACGTGGGCTTGAGTGGCGAGGTG
GAGCGATGAGCGTCGGAAGT

Downstream 100 bases:

>100_bases
GCGGGTGAGCGCGGGGCGGTGGCTCGCCGGTCTCGAGGGCTCGAGCGCGAGCGAAAACGGCCGATAAGAACGATGACGAG
GGAGGACGAGTCATGATGCG

Product: flagellar hook capping protein

Products: NA

Alternate protein names: ORF 8 [H]

Number of amino acids: Translated: 146; Mature: 145

Protein sequence:

>146_residues
MSDSNGPVTTNPLSSGGGVGPGGQLDKQAFLMLLVAQLKNQDPMNPMQDREFIAQLAQLNTLEQLQQLNETVAAMAQHAA
LGQVAGYLGRVVSGLDRTSGDLVTGTVVRATILDGAAVLELSGGQRIDVRDVVSIGLAGAGSGSGE

Sequences:

>Translated_146_residues
MSDSNGPVTTNPLSSGGGVGPGGQLDKQAFLMLLVAQLKNQDPMNPMQDREFIAQLAQLNTLEQLQQLNETVAAMAQHAA
LGQVAGYLGRVVSGLDRTSGDLVTGTVVRATILDGAAVLELSGGQRIDVRDVVSIGLAGAGSGSGE
>Mature_145_residues
SDSNGPVTTNPLSSGGGVGPGGQLDKQAFLMLLVAQLKNQDPMNPMQDREFIAQLAQLNTLEQLQQLNETVAAMAQHAAL
GQVAGYLGRVVSGLDRTSGDLVTGTVVRATILDGAAVLELSGGQRIDVRDVVSIGLAGAGSGSGE

Specific function: Required For Flagellar Hook Formation. May Act As A Scaffolding Protein. [C]

COG id: COG1843

COG function: function code N; Flagellar hook capping protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flgD family [H]

Homologues:

Organism=Escherichia coli, GI1787315, Length=50, Percent_Identity=50, Blast_Score=62, Evalue=2e-11,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005648 [H]

Pfam domain/function: PF03963 FlgD [H]

EC number: NA

Molecular weight: Translated: 14914; Mature: 14783

Theoretical pI: Translated: 4.25; Mature: 4.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDSNGPVTTNPLSSGGGVGPGGQLDKQAFLMLLVAQLKNQDPMNPMQDREFIAQLAQLN
CCCCCCCEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH
TLEQLQQLNETVAAMAQHAALGQVAGYLGRVVSGLDRTSGDLVTGTVVRATILDGAAVLE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCEEEEE
LSGGQRIDVRDVVSIGLAGAGSGSGE
ECCCCEECHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
SDSNGPVTTNPLSSGGGVGPGGQLDKQAFLMLLVAQLKNQDPMNPMQDREFIAQLAQLN
CCCCCCEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH
TLEQLQQLNETVAAMAQHAALGQVAGYLGRVVSGLDRTSGDLVTGTVVRATILDGAAVLE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCEEEEE
LSGGQRIDVRDVVSIGLAGAGSGSGE
ECCCCEECHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1828465; 9384377 [H]