Definition Thermomicrobium roseum DSM 5159 plasmid unnamed, complete sequence.
Accession NC_011961
Length 917,738

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The map label for this gene is 221636050

Identifier: 221636050

GI number: 221636050

Start: 636144

End: 637547

Strand: Reverse

Name: 221636050

Synonym: trd_A0644

Alternate gene names: NA

Gene position: 637547-636144 (Counterclockwise)

Preceding gene: 221636051

Following gene: 221636049

Centisome position: 69.47

GC content: 71.08

Gene sequence:

>1404_bases
ATGGTCTTACCGGTCGTGTCGACACCGAACGGAGTGCACGAGCGGGCTGGCCCGCGGCCCGGGGATCTGGGAAGCGACGC
GCAGGCGTTCCTGGCGATCCTGGCGACACTGCTCGGGCTGGTGCCGACTGGGGAGGAAGGACCGGGAAACGGGTTGATGC
CCGCAGACGCCAGCGCAGCCGAGGGCAGGACGCGCGAACTGACGCACCGGTTGGAAGAGTCGGTCATGCCGGACAGCATG
CTGTTCGGTGTCGCACAGGCTGGGTTGGTGCTGGCCGGAGTAGCGAGCACGGACGGACAAATGAAGGGTCAGTCGCATGG
CGAGCGACGCTCCGACACGCCGCGGTTGGGCACCGTCTTCGCTGCTGGGATGGTGCCATCCGAGCTCGGCGTACTGACCG
GCCTCGCCGGCACGCTATCGGTCGATGATGGCCAGGCGAGCGCGGTGATCGGGGAACCAGCGATCGCTCAGCAGTCAGCG
AGCCTGCTCGAGTACGCGCAGTCGAGTGGGCAAGCGGCGTTGGGTGAACCGGCGAGCGGAGCCGTGCAGGCTGGGGACGA
GGGACAGCCGAAAGGGTGGCAGGGTCCGACGGTCGGCGCGCTCCTGCAGCACACGGCTGCGGGTGCCGGCGGACCCGTCG
CGTTGGACGAAGCTGGGCGGGCTGCCGCGCACCGGATAGCGCACCGAGTCGAGCCGGTGGGAGGGTCCGAAGGAGTCGGG
GTTACCCCTGAGCGAGGAAGTGAGGCGGTGCAGCGAGTGCCCGCGGGGGTACGCGTCTGGGTCGAGGAGCAGGCGTCGGA
TGGTCGAGGCCAGGCGCTGACGGTGGCGACTGAGCGGCGCGTCCGGCACGACGACCGGCCGGCGCTCGCGGGAGCCCTCC
CGGTGAGCGACACTCCGGGCAGTCGACTGGGTGAGGCTGGGCCGGTTCCGGCTGCTGGCGAGGAAGCAGCCGCGGGCGCG
ATCGGACAGGTGCAGGAGCGCGTGGCGCAGGCGATCGCGCACGGCACGCGGCAGCTCCGCGTGCGGCTGGAGCCGCCCGA
CCTGGGAGTGGTCGACGTACGCATCCGCGAGATTGCGGGGCGACTGGAGGTGACGCTGGCGGCCAACCAGCCGGAGGTAC
GGCAGGCGCTGGAAGCCGGACGGGAGAGCCTGCGTGCCTCGCTCGCGGCGGGAGGGTTCGCGGTGCAACGGGTGGAGGTG
CAGCCGCTGACGATGGCGAGTGGGCAGAACGGGATCAGCGGCAGTCAATCCGGAATGGGTTGGCCGGGCGGGCAACAGGG
AGCCTCGAGCGATCCTGGTTGGGCACGCCCCGAGCGGACGGCCCTGGACCAGCTGCCGGTGGTAGGGGACTCCCGAGGGC
GAGTGCGCCAGGAGTCGAGCGGACTCGTGGACACGTGGGCTTGA

Upstream 100 bases:

>100_bases
AGCGCGGTGAGCGAAGTCCTGGCGCGACGCCTGGCCATGCTGCGTGCCATGGCGAGCGGCGGTCAGGGTAGCTGAGTGCC
TCGAGCGGGGAGGTGCGGTG

Downstream 100 bases:

>100_bases
GTGGCGAGGTGGAGCGATGAGCGTCGGAAGTGTGAGCGACTCGAACGGTCCGGTGACGACGAACCCATTATCGTCCGGCG
GCGGTGTGGGCCCCGGTGGC

Product: putative MotD chemotaxis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 467; Mature: 467

Protein sequence:

>467_residues
MVLPVVSTPNGVHERAGPRPGDLGSDAQAFLAILATLLGLVPTGEEGPGNGLMPADASAAEGRTRELTHRLEESVMPDSM
LFGVAQAGLVLAGVASTDGQMKGQSHGERRSDTPRLGTVFAAGMVPSELGVLTGLAGTLSVDDGQASAVIGEPAIAQQSA
SLLEYAQSSGQAALGEPASGAVQAGDEGQPKGWQGPTVGALLQHTAAGAGGPVALDEAGRAAAHRIAHRVEPVGGSEGVG
VTPERGSEAVQRVPAGVRVWVEEQASDGRGQALTVATERRVRHDDRPALAGALPVSDTPGSRLGEAGPVPAAGEEAAAGA
IGQVQERVAQAIAHGTRQLRVRLEPPDLGVVDVRIREIAGRLEVTLAANQPEVRQALEAGRESLRASLAAGGFAVQRVEV
QPLTMASGQNGISGSQSGMGWPGGQQGASSDPGWARPERTALDQLPVVGDSRGRVRQESSGLVDTWA

Sequences:

>Translated_467_residues
MVLPVVSTPNGVHERAGPRPGDLGSDAQAFLAILATLLGLVPTGEEGPGNGLMPADASAAEGRTRELTHRLEESVMPDSM
LFGVAQAGLVLAGVASTDGQMKGQSHGERRSDTPRLGTVFAAGMVPSELGVLTGLAGTLSVDDGQASAVIGEPAIAQQSA
SLLEYAQSSGQAALGEPASGAVQAGDEGQPKGWQGPTVGALLQHTAAGAGGPVALDEAGRAAAHRIAHRVEPVGGSEGVG
VTPERGSEAVQRVPAGVRVWVEEQASDGRGQALTVATERRVRHDDRPALAGALPVSDTPGSRLGEAGPVPAAGEEAAAGA
IGQVQERVAQAIAHGTRQLRVRLEPPDLGVVDVRIREIAGRLEVTLAANQPEVRQALEAGRESLRASLAAGGFAVQRVEV
QPLTMASGQNGISGSQSGMGWPGGQQGASSDPGWARPERTALDQLPVVGDSRGRVRQESSGLVDTWA
>Mature_467_residues
MVLPVVSTPNGVHERAGPRPGDLGSDAQAFLAILATLLGLVPTGEEGPGNGLMPADASAAEGRTRELTHRLEESVMPDSM
LFGVAQAGLVLAGVASTDGQMKGQSHGERRSDTPRLGTVFAAGMVPSELGVLTGLAGTLSVDDGQASAVIGEPAIAQQSA
SLLEYAQSSGQAALGEPASGAVQAGDEGQPKGWQGPTVGALLQHTAAGAGGPVALDEAGRAAAHRIAHRVEPVGGSEGVG
VTPERGSEAVQRVPAGVRVWVEEQASDGRGQALTVATERRVRHDDRPALAGALPVSDTPGSRLGEAGPVPAAGEEAAAGA
IGQVQERVAQAIAHGTRQLRVRLEPPDLGVVDVRIREIAGRLEVTLAANQPEVRQALEAGRESLRASLAAGGFAVQRVEV
QPLTMASGQNGISGSQSGMGWPGGQQGASSDPGWARPERTALDQLPVVGDSRGRVRQESSGLVDTWA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 47429; Mature: 47429

Theoretical pI: Translated: 4.79; Mature: 4.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVLPVVSTPNGVHERAGPRPGDLGSDAQAFLAILATLLGLVPTGEEGPGNGLMPADASAA
CEEECCCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
EGRTRELTHRLEESVMPDSMLFGVAQAGLVLAGVASTDGQMKGQSHGERRSDTPRLGTVF
CCHHHHHHHHHHHHCCCHHHHHHHHHHCEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHH
AAGMVPSELGVLTGLAGTLSVDDGQASAVIGEPAIAQQSASLLEYAQSSGQAALGEPASG
HHCCCHHHHHHHHCCCCEEEECCCCCCEEECCCHHHHHHHHHHHHHHHCCCCCCCCCCCC
AVQAGDEGQPKGWQGPTVGALLQHTAAGAGGPVALDEAGRAAAHRIAHRVEPVGGSEGVG
CCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHCCCCCCCCCCC
VTPERGSEAVQRVPAGVRVWVEEQASDGRGQALTVATERRVRHDDRPALAGALPVSDTPG
CCCCCCHHHHHHCCCCEEEEEECCCCCCCCCEEEEEHHHHHCCCCCCCCEECCCCCCCCC
SRLGEAGPVPAAGEEAAAGAIGQVQERVAQAIAHGTRQLRVRLEPPDLGVVDVRIREIAG
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCEEHHHHHHHHC
RLEVTLAANQPEVRQALEAGRESLRASLAAGGFAVQRVEVQPLTMASGQNGISGSQSGMG
CEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECEEEECCCCCCCCCCCCCCC
WPGGQQGASSDPGWARPERTALDQLPVVGDSRGRVRQESSGLVDTWA
CCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCHHCCCCCCCCC
>Mature Secondary Structure
MVLPVVSTPNGVHERAGPRPGDLGSDAQAFLAILATLLGLVPTGEEGPGNGLMPADASAA
CEEECCCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
EGRTRELTHRLEESVMPDSMLFGVAQAGLVLAGVASTDGQMKGQSHGERRSDTPRLGTVF
CCHHHHHHHHHHHHCCCHHHHHHHHHHCEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHH
AAGMVPSELGVLTGLAGTLSVDDGQASAVIGEPAIAQQSASLLEYAQSSGQAALGEPASG
HHCCCHHHHHHHHCCCCEEEECCCCCCEEECCCHHHHHHHHHHHHHHHCCCCCCCCCCCC
AVQAGDEGQPKGWQGPTVGALLQHTAAGAGGPVALDEAGRAAAHRIAHRVEPVGGSEGVG
CCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHCCCCCCCCCCC
VTPERGSEAVQRVPAGVRVWVEEQASDGRGQALTVATERRVRHDDRPALAGALPVSDTPG
CCCCCCHHHHHHCCCCEEEEEECCCCCCCCCEEEEEHHHHHCCCCCCCCEECCCCCCCCC
SRLGEAGPVPAAGEEAAAGAIGQVQERVAQAIAHGTRQLRVRLEPPDLGVVDVRIREIAG
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCEEHHHHHHHHC
RLEVTLAANQPEVRQALEAGRESLRASLAAGGFAVQRVEVQPLTMASGQNGISGSQSGMG
CEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECEEEECCCCCCCCCCCCCCC
WPGGQQGASSDPGWARPERTALDQLPVVGDSRGRVRQESSGLVDTWA
CCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA