| Definition | Thermomicrobium roseum DSM 5159 plasmid unnamed, complete sequence. |
|---|---|
| Accession | NC_011961 |
| Length | 917,738 |
Click here to switch to the map view.
The map label for this gene is 221636046
Identifier: 221636046
GI number: 221636046
Start: 630857
End: 631519
Strand: Reverse
Name: 221636046
Synonym: trd_A0640
Alternate gene names: NA
Gene position: 631519-630857 (Counterclockwise)
Preceding gene: 221636047
Following gene: 221636045
Centisome position: 68.81
GC content: 66.21
Gene sequence:
>663_bases ATGCGCTCGGCGGGGCTGCTCCTGCTTCTCGCTGCGGCGGCGTGGATCCTCGGTGCCGGGATCGGCCTCCTGGCTGGAAC GTCGTTGCGCGACGATCCCCGGCCGACCCCGACAGTGCGCCCGCGTGTCGTTGCGGTGACGCCGACCGCAACGCCCACGA CGCAGGCGAATCCTGTCACGGACGGTTCGGCAGTTTCTCCCCCGAGCGAGCCGATCCTGATCACACGTATCCGGATCCCG GCGATCGGGGTCGATGCACCGGTCGTCGTGAAAGGGTTGGGCAGCGAGCGTCGGATGGAAGCTCCGGATCATCCGGACGA AGTCGCCTGGTACGACTTCACGGCGCTACCCGGGCAAGGCAGCAACGTCGTGCTGGCTGGGCACGTCGATTTTGCTGGCG TAGGCCCGGCGGTATTCTGGGATCTCTGGCGTGTCCGCGTCGGTGATCTGGTCGAGTTGGGATTGGCGGATGGTCGGGTG AGCCGGTACCGCGTGACGGGGCTGGAAACGGTCGAGGAAAGGCAAGCACCGGTCGAACGAATCGTCGGACCGACCAGTCA GGAACGGCTGACGCTGATCACCTGCGCGGGGAACTACAACCCGGCAACTGGGCGGTACGACCAGCGCTTGATCGTCACTG CGACTCCTCTCGCCAACCCATGA
Upstream 100 bases:
>100_bases GGGAGTGGGCTTGCTCGCCCTGGGGGTCGCCGGGATGATGGCCGGTGGTGTGGGGATGATGCGAGGGCGGCGAAGCAATG GTGCGCGCGAGAGGTAGTCG
Downstream 100 bases:
>100_bases GGGCACCGAGTGATGCGGGAGCGCGTTGCCTCGCGACTCAGTCTGGCGAGAACGAGACCCTGTGATGCGACTCGCCCGCG GCGCGACCATGCGGCTGGAC
Product: peptidase C60 sortase A and B
Products: NA
Alternate protein names: Secreted Protein; Lipoprotein; Sortase-Like Protein; Peptidase C; Sortase; Sortase Family Protein; LOW QUALITY PROTEIN Secreted Protein; C60 Family Sortase A; Sortase D Type
Number of amino acids: Translated: 220; Mature: 220
Protein sequence:
>220_residues MRSAGLLLLLAAAAWILGAGIGLLAGTSLRDDPRPTPTVRPRVVAVTPTATPTTQANPVTDGSAVSPPSEPILITRIRIP AIGVDAPVVVKGLGSERRMEAPDHPDEVAWYDFTALPGQGSNVVLAGHVDFAGVGPAVFWDLWRVRVGDLVELGLADGRV SRYRVTGLETVEERQAPVERIVGPTSQERLTLITCAGNYNPATGRYDQRLIVTATPLANP
Sequences:
>Translated_220_residues MRSAGLLLLLAAAAWILGAGIGLLAGTSLRDDPRPTPTVRPRVVAVTPTATPTTQANPVTDGSAVSPPSEPILITRIRIP AIGVDAPVVVKGLGSERRMEAPDHPDEVAWYDFTALPGQGSNVVLAGHVDFAGVGPAVFWDLWRVRVGDLVELGLADGRV SRYRVTGLETVEERQAPVERIVGPTSQERLTLITCAGNYNPATGRYDQRLIVTATPLANP >Mature_220_residues MRSAGLLLLLAAAAWILGAGIGLLAGTSLRDDPRPTPTVRPRVVAVTPTATPTTQANPVTDGSAVSPPSEPILITRIRIP AIGVDAPVVVKGLGSERRMEAPDHPDEVAWYDFTALPGQGSNVVLAGHVDFAGVGPAVFWDLWRVRVGDLVELGLADGRV SRYRVTGLETVEERQAPVERIVGPTSQERLTLITCAGNYNPATGRYDQRLIVTATPLANP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23295; Mature: 23295
Theoretical pI: Translated: 5.81; Mature: 5.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRSAGLLLLLAAAAWILGAGIGLLAGTSLRDDPRPTPTVRPRVVAVTPTATPTTQANPVT CCCCHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCC DGSAVSPPSEPILITRIRIPAIGVDAPVVVKGLGSERRMEAPDHPDEVAWYDFTALPGQG CCCCCCCCCCCEEEEEEECCEECCCCCEEEECCCCCCCCCCCCCCCCEEEEEEEECCCCC SNVVLAGHVDFAGVGPAVFWDLWRVRVGDLVELGLADGRVSRYRVTGLETVEERQAPVER CCEEEEECCCCCCCCHHHHHHHHHHHHCCEEEECCCCCCCEEEEECCCHHHHHHHCCHHH IVGPTSQERLTLITCAGNYNPATGRYDQRLIVTATPLANP HCCCCCCCEEEEEEEECCCCCCCCCCCCEEEEEECCCCCC >Mature Secondary Structure MRSAGLLLLLAAAAWILGAGIGLLAGTSLRDDPRPTPTVRPRVVAVTPTATPTTQANPVT CCCCHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCC DGSAVSPPSEPILITRIRIPAIGVDAPVVVKGLGSERRMEAPDHPDEVAWYDFTALPGQG CCCCCCCCCCCEEEEEEECCEECCCCCEEEECCCCCCCCCCCCCCCCEEEEEEEECCCCC SNVVLAGHVDFAGVGPAVFWDLWRVRVGDLVELGLADGRVSRYRVTGLETVEERQAPVER CCEEEEECCCCCCCCHHHHHHHHHHHHCCEEEECCCCCCCEEEEECCCHHHHHHHCCHHH IVGPTSQERLTLITCAGNYNPATGRYDQRLIVTATPLANP HCCCCCCCEEEEEEEECCCCCCCCCCCCEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA