| Definition | Thermomicrobium roseum DSM 5159 plasmid unnamed, complete sequence. |
|---|---|
| Accession | NC_011961 |
| Length | 917,738 |
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The map label for this gene is yaiN [C]
Identifier: 221636036
GI number: 221636036
Start: 622800
End: 623078
Strand: Reverse
Name: yaiN [C]
Synonym: trd_A0630
Alternate gene names: 221636036
Gene position: 623078-622800 (Counterclockwise)
Preceding gene: 221636038
Following gene: 221636035
Centisome position: 67.89
GC content: 63.08
Gene sequence:
>279_bases ATGACCTCAGTCGCGCAGCTGGACGAAGTCACACGTCGCGAACTGGTCGAGCGCCTGCGTCGCATCGAAGGACAAGCGCG GGGGATCGCTCGCATGATCGAGGAAGGGCGGGATTGCGTCGATATCGTGCAACAACTGGCGGCGATGCGAGCAGCGACCG ATAGCTTGTGCGCCGAGCTCGTGCAAGCCATGTTGGAACGCTGCTTTCTCGACGGAACACCACCTGCGCCGCAGCAACTG GCGCGCGCTCTCAAAGCGGTGATCCGCGGTGGACGATGA
Upstream 100 bases:
>100_bases GAGTGGGTGAGGCAAGACATCGCTGCGAGGTCTTGACGCTGGTTCGACATTCGCGTTACAGTGTAGCCGTACCCCGGTTG AGTATCTCGGAGGAGGAGCG
Downstream 100 bases:
>100_bases GGGGGACGCCGATGGCGCGCTATGGGTTCGTCATCGACCAGCGCAAATGCATCGGCTGTCATGCCTGCACGGTCGCTTGT AAATCGGAGAACCTCGTTCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 92; Mature: 91
Protein sequence:
>92_residues MTSVAQLDEVTRRELVERLRRIEGQARGIARMIEEGRDCVDIVQQLAAMRAATDSLCAELVQAMLERCFLDGTPPAPQQL ARALKAVIRGGR
Sequences:
>Translated_92_residues MTSVAQLDEVTRRELVERLRRIEGQARGIARMIEEGRDCVDIVQQLAAMRAATDSLCAELVQAMLERCFLDGTPPAPQQL ARALKAVIRGGR >Mature_91_residues TSVAQLDEVTRRELVERLRRIEGQARGIARMIEEGRDCVDIVQQLAAMRAATDSLCAELVQAMLERCFLDGTPPAPQQLA RALKAVIRGGR
Specific function: Unknown
COG id: COG1937
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10191; Mature: 10060
Theoretical pI: Translated: 8.05; Mature: 8.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.3 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 7.6 %Cys+Met (Translated Protein) 3.3 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 6.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSVAQLDEVTRRELVERLRRIEGQARGIARMIEEGRDCVDIVQQLAAMRAATDSLCAEL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH VQAMLERCFLDGTPPAPQQLARALKAVIRGGR HHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCC >Mature Secondary Structure TSVAQLDEVTRRELVERLRRIEGQARGIARMIEEGRDCVDIVQQLAAMRAATDSLCAEL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH VQAMLERCFLDGTPPAPQQLARALKAVIRGGR HHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA