| Definition | Thermomicrobium roseum DSM 5159 plasmid unnamed, complete sequence. |
|---|---|
| Accession | NC_011961 |
| Length | 917,738 |
Click here to switch to the map view.
The map label for this gene is fbpA [H]
Identifier: 221635940
GI number: 221635940
Start: 527115
End: 528263
Strand: Reverse
Name: fbpA [H]
Synonym: trd_A0534
Alternate gene names: 221635940
Gene position: 528263-527115 (Counterclockwise)
Preceding gene: 221635941
Following gene: 221635939
Centisome position: 57.56
GC content: 63.45
Gene sequence:
>1149_bases ATGCGTCGCCGCGATCTTATCCGCCTCGGCGGACTCGGGCTCGCCGCTGGATGGACACTCCTTGCCGCCTGCCGGAGTAC CGAGCCGACTGCGACCCCCGCACCTCCGACACCAACAGCAGCCGGGGCAGGCATGGCTCCGACGGCTTCGCCCACCCCAG CGGCTGCTGCGACACGAACGGCCGGCGCAACACCGACCGTGATGACACGCTCCCAGAGTGCAGTCGTGACTATTTATTCT GGTCGCTCCAAGTCGCTGATCGGGCCGTTGCTCGACCGGATCGGTCAGGAACTCGGACTGGATGTGCGGGTGCGCTACGG AGATACCGCCGAATTGGCGACCGCGATCCTGGAGGAAGGGGACCGTTCGCCAGCAGACCTCTTCTTCGGACAGGATGCTG GTGCCTTGGGCGCACTCGCTAAGGAAGGTCGCTTGGCGCCGCTCCCGAGCGAACTCCTGCAACGTGTGCCGCAACCGTAC CGCTCTCCCAAGGGACTCTGGGTCGGCATCAGTGGACGAGTCCGCACCGTCATCTACAACACCGAGCGGGTGAAGCCAGA GGAGATCCCTGCCTCGATCGTCGACTTCGCGGGGAACGAGCGCTGGCGTGCCCGACTCGGCTGGGCTCCGACGAACGGAT CTTTTCAAGCATTCGTGACGGCTCTCCGTCGGTTGCGCGGGGAGGATGTCGCGCGCTCCTGGCTCCAGGGAGTCAAAGCG CTCGACGCACGCGTCTTCCCCAACAATTCGAGCATCGTCCAAGCGACGATCAAGGGAGAGATCGAAGCCGGGTTCGTCAA CCATTACTATCTCATGCGCGAGCGTGCGCAGGCTGGTCGGCCGCTGCCAGCGGAAAACTATTTCTATACCAATGGTGATC CTGGCGGGTTAGTCAACGTGGCAGGCGTCGGCGTGTTGGTGACGAGCCGCGCCAGCGATGCCGCTCTTGCGCTTGTCGAT TATTTGCTCAGTGAGCCAGCTCAGCGTTACTTCGCCGAGCAGACGTTCGAGTATCCGCTCCTCGAAGGTATACCGGCTCA TCCGGATCTGCCGCCGCTGGCGTCGCTCAATCCGCCGGCACTCGATCTCTCCGATCTGGACGATCTCAAGGGAACACTGG CTCTCCTTCAGGAGGTCGGGCTCCTGTGA
Upstream 100 bases:
>100_bases ACGAAGTCGGGATTCTCCGGTGGCCACCGAGCCCGAACAGTCGGTCCCCCGATGCGGGACGAAGGGAGACGGAGAGACTC GACGATTGAAAGGAGAGACG
Downstream 100 bases:
>100_bases CGGCGTCAGCAGGGCGAACGACCATCGCGCACTCGCTACGGCAGCGCTGGAGCCTCGTGGTGATCCGCCCCAGCGAAGTC GTGGCGCTGGTCGTCGCGTC
Product: extracellular solute-binding protein, family 1
Products: NA
Alternate protein names: Fe(3+)-binding protein; Iron-regulated 40 kDa protein; Major ferric iron-binding protein; MIRP [H]
Number of amino acids: Translated: 382; Mature: 382
Protein sequence:
>382_residues MRRRDLIRLGGLGLAAGWTLLAACRSTEPTATPAPPTPTAAGAGMAPTASPTPAAAATRTAGATPTVMTRSQSAVVTIYS GRSKSLIGPLLDRIGQELGLDVRVRYGDTAELATAILEEGDRSPADLFFGQDAGALGALAKEGRLAPLPSELLQRVPQPY RSPKGLWVGISGRVRTVIYNTERVKPEEIPASIVDFAGNERWRARLGWAPTNGSFQAFVTALRRLRGEDVARSWLQGVKA LDARVFPNNSSIVQATIKGEIEAGFVNHYYLMRERAQAGRPLPAENYFYTNGDPGGLVNVAGVGVLVTSRASDAALALVD YLLSEPAQRYFAEQTFEYPLLEGIPAHPDLPPLASLNPPALDLSDLDDLKGTLALLQEVGLL
Sequences:
>Translated_382_residues MRRRDLIRLGGLGLAAGWTLLAACRSTEPTATPAPPTPTAAGAGMAPTASPTPAAAATRTAGATPTVMTRSQSAVVTIYS GRSKSLIGPLLDRIGQELGLDVRVRYGDTAELATAILEEGDRSPADLFFGQDAGALGALAKEGRLAPLPSELLQRVPQPY RSPKGLWVGISGRVRTVIYNTERVKPEEIPASIVDFAGNERWRARLGWAPTNGSFQAFVTALRRLRGEDVARSWLQGVKA LDARVFPNNSSIVQATIKGEIEAGFVNHYYLMRERAQAGRPLPAENYFYTNGDPGGLVNVAGVGVLVTSRASDAALALVD YLLSEPAQRYFAEQTFEYPLLEGIPAHPDLPPLASLNPPALDLSDLDDLKGTLALLQEVGLL >Mature_382_residues MRRRDLIRLGGLGLAAGWTLLAACRSTEPTATPAPPTPTAAGAGMAPTASPTPAAAATRTAGATPTVMTRSQSAVVTIYS GRSKSLIGPLLDRIGQELGLDVRVRYGDTAELATAILEEGDRSPADLFFGQDAGALGALAKEGRLAPLPSELLQRVPQPY RSPKGLWVGISGRVRTVIYNTERVKPEEIPASIVDFAGNERWRARLGWAPTNGSFQAFVTALRRLRGEDVARSWLQGVKA LDARVFPNNSSIVQATIKGEIEAGFVNHYYLMRERAQAGRPLPAENYFYTNGDPGGLVNVAGVGVLVTSRASDAALALVD YLLSEPAQRYFAEQTFEYPLLEGIPAHPDLPPLASLNPPALDLSDLDDLKGTLALLQEVGLL
Specific function: Part of the ABC transporter complex fbpABC (TC 3.A.1.10.1) involved in Fe(3+) ions import. This protein specifically binds Fe(3+) and is involved in its transmembrane transport [H]
COG id: COG1840
COG function: function code P; ABC-type Fe3+ transport system, periplasmic component
Gene ontology:
Cell location: Periplasm (Probable) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 1 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006059 - InterPro: IPR006061 [H]
Pfam domain/function: PF01547 SBP_bac_1 [H]
EC number: NA
Molecular weight: Translated: 40718; Mature: 40718
Theoretical pI: Translated: 6.57; Mature: 6.57
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRRDLIRLGGLGLAAGWTLLAACRSTEPTATPAPPTPTAAGAGMAPTASPTPAAAATRT CCCCCEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCC AGATPTVMTRSQSAVVTIYSGRSKSLIGPLLDRIGQELGLDVRVRYGDTAELATAILEEG CCCCCCEEECCCCEEEEEECCCCCHHHHHHHHHHHHHHCCEEEEEECCHHHHHHHHHHCC DRSPADLFFGQDAGALGALAKEGRLAPLPSELLQRVPQPYRSPKGLWVGISGRVRTVIYN CCCCHHEEECCCCCHHHHHHHCCCCCCCHHHHHHHCCHHHCCCCCEEEEECCCEEEEEEE TERVKPEEIPASIVDFAGNERWRARLGWAPTNGSFQAFVTALRRLRGEDVARSWLQGVKA CCCCCHHHCCHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHH LDARVFPNNSSIVQATIKGEIEAGFVNHYYLMRERAQAGRPLPAENYFYTNGDPGGLVNV HHCEECCCCCCEEEEEEECCEEECHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCEEEE AGVGVLVTSRASDAALALVDYLLSEPAQRYFAEQTFEYPLLEGIPAHPDLPPLASLNPPA CCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCCCCCCCCC LDLSDLDDLKGTLALLQEVGLL CCHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MRRRDLIRLGGLGLAAGWTLLAACRSTEPTATPAPPTPTAAGAGMAPTASPTPAAAATRT CCCCCEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCC AGATPTVMTRSQSAVVTIYSGRSKSLIGPLLDRIGQELGLDVRVRYGDTAELATAILEEG CCCCCCEEECCCCEEEEEECCCCCHHHHHHHHHHHHHHCCEEEEEECCHHHHHHHHHHCC DRSPADLFFGQDAGALGALAKEGRLAPLPSELLQRVPQPYRSPKGLWVGISGRVRTVIYN CCCCHHEEECCCCCHHHHHHHCCCCCCCHHHHHHHCCHHHCCCCCEEEEECCCEEEEEEE TERVKPEEIPASIVDFAGNERWRARLGWAPTNGSFQAFVTALRRLRGEDVARSWLQGVKA CCCCCHHHCCHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHH LDARVFPNNSSIVQATIKGEIEAGFVNHYYLMRERAQAGRPLPAENYFYTNGDPGGLVNV HHCEECCCCCCEEEEEEECCEEECHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCEEEE AGVGVLVTSRASDAALALVDYLLSEPAQRYFAEQTFEYPLLEGIPAHPDLPPLASLNPPA CCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCCCCCCCCC LDLSDLDDLKGTLALLQEVGLL CCHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7542800; 7927717; 1556062; 10675023; 9360608; 11747438 [H]