The gene/protein map for NC_011961 is currently unavailable.
Definition Thermomicrobium roseum DSM 5159 plasmid unnamed, complete sequence.
Accession NC_011961
Length 917,738

Click here to switch to the map view.

The map label for this gene is fbpA [H]

Identifier: 221635940

GI number: 221635940

Start: 527115

End: 528263

Strand: Reverse

Name: fbpA [H]

Synonym: trd_A0534

Alternate gene names: 221635940

Gene position: 528263-527115 (Counterclockwise)

Preceding gene: 221635941

Following gene: 221635939

Centisome position: 57.56

GC content: 63.45

Gene sequence:

>1149_bases
ATGCGTCGCCGCGATCTTATCCGCCTCGGCGGACTCGGGCTCGCCGCTGGATGGACACTCCTTGCCGCCTGCCGGAGTAC
CGAGCCGACTGCGACCCCCGCACCTCCGACACCAACAGCAGCCGGGGCAGGCATGGCTCCGACGGCTTCGCCCACCCCAG
CGGCTGCTGCGACACGAACGGCCGGCGCAACACCGACCGTGATGACACGCTCCCAGAGTGCAGTCGTGACTATTTATTCT
GGTCGCTCCAAGTCGCTGATCGGGCCGTTGCTCGACCGGATCGGTCAGGAACTCGGACTGGATGTGCGGGTGCGCTACGG
AGATACCGCCGAATTGGCGACCGCGATCCTGGAGGAAGGGGACCGTTCGCCAGCAGACCTCTTCTTCGGACAGGATGCTG
GTGCCTTGGGCGCACTCGCTAAGGAAGGTCGCTTGGCGCCGCTCCCGAGCGAACTCCTGCAACGTGTGCCGCAACCGTAC
CGCTCTCCCAAGGGACTCTGGGTCGGCATCAGTGGACGAGTCCGCACCGTCATCTACAACACCGAGCGGGTGAAGCCAGA
GGAGATCCCTGCCTCGATCGTCGACTTCGCGGGGAACGAGCGCTGGCGTGCCCGACTCGGCTGGGCTCCGACGAACGGAT
CTTTTCAAGCATTCGTGACGGCTCTCCGTCGGTTGCGCGGGGAGGATGTCGCGCGCTCCTGGCTCCAGGGAGTCAAAGCG
CTCGACGCACGCGTCTTCCCCAACAATTCGAGCATCGTCCAAGCGACGATCAAGGGAGAGATCGAAGCCGGGTTCGTCAA
CCATTACTATCTCATGCGCGAGCGTGCGCAGGCTGGTCGGCCGCTGCCAGCGGAAAACTATTTCTATACCAATGGTGATC
CTGGCGGGTTAGTCAACGTGGCAGGCGTCGGCGTGTTGGTGACGAGCCGCGCCAGCGATGCCGCTCTTGCGCTTGTCGAT
TATTTGCTCAGTGAGCCAGCTCAGCGTTACTTCGCCGAGCAGACGTTCGAGTATCCGCTCCTCGAAGGTATACCGGCTCA
TCCGGATCTGCCGCCGCTGGCGTCGCTCAATCCGCCGGCACTCGATCTCTCCGATCTGGACGATCTCAAGGGAACACTGG
CTCTCCTTCAGGAGGTCGGGCTCCTGTGA

Upstream 100 bases:

>100_bases
ACGAAGTCGGGATTCTCCGGTGGCCACCGAGCCCGAACAGTCGGTCCCCCGATGCGGGACGAAGGGAGACGGAGAGACTC
GACGATTGAAAGGAGAGACG

Downstream 100 bases:

>100_bases
CGGCGTCAGCAGGGCGAACGACCATCGCGCACTCGCTACGGCAGCGCTGGAGCCTCGTGGTGATCCGCCCCAGCGAAGTC
GTGGCGCTGGTCGTCGCGTC

Product: extracellular solute-binding protein, family 1

Products: NA

Alternate protein names: Fe(3+)-binding protein; Iron-regulated 40 kDa protein; Major ferric iron-binding protein; MIRP [H]

Number of amino acids: Translated: 382; Mature: 382

Protein sequence:

>382_residues
MRRRDLIRLGGLGLAAGWTLLAACRSTEPTATPAPPTPTAAGAGMAPTASPTPAAAATRTAGATPTVMTRSQSAVVTIYS
GRSKSLIGPLLDRIGQELGLDVRVRYGDTAELATAILEEGDRSPADLFFGQDAGALGALAKEGRLAPLPSELLQRVPQPY
RSPKGLWVGISGRVRTVIYNTERVKPEEIPASIVDFAGNERWRARLGWAPTNGSFQAFVTALRRLRGEDVARSWLQGVKA
LDARVFPNNSSIVQATIKGEIEAGFVNHYYLMRERAQAGRPLPAENYFYTNGDPGGLVNVAGVGVLVTSRASDAALALVD
YLLSEPAQRYFAEQTFEYPLLEGIPAHPDLPPLASLNPPALDLSDLDDLKGTLALLQEVGLL

Sequences:

>Translated_382_residues
MRRRDLIRLGGLGLAAGWTLLAACRSTEPTATPAPPTPTAAGAGMAPTASPTPAAAATRTAGATPTVMTRSQSAVVTIYS
GRSKSLIGPLLDRIGQELGLDVRVRYGDTAELATAILEEGDRSPADLFFGQDAGALGALAKEGRLAPLPSELLQRVPQPY
RSPKGLWVGISGRVRTVIYNTERVKPEEIPASIVDFAGNERWRARLGWAPTNGSFQAFVTALRRLRGEDVARSWLQGVKA
LDARVFPNNSSIVQATIKGEIEAGFVNHYYLMRERAQAGRPLPAENYFYTNGDPGGLVNVAGVGVLVTSRASDAALALVD
YLLSEPAQRYFAEQTFEYPLLEGIPAHPDLPPLASLNPPALDLSDLDDLKGTLALLQEVGLL
>Mature_382_residues
MRRRDLIRLGGLGLAAGWTLLAACRSTEPTATPAPPTPTAAGAGMAPTASPTPAAAATRTAGATPTVMTRSQSAVVTIYS
GRSKSLIGPLLDRIGQELGLDVRVRYGDTAELATAILEEGDRSPADLFFGQDAGALGALAKEGRLAPLPSELLQRVPQPY
RSPKGLWVGISGRVRTVIYNTERVKPEEIPASIVDFAGNERWRARLGWAPTNGSFQAFVTALRRLRGEDVARSWLQGVKA
LDARVFPNNSSIVQATIKGEIEAGFVNHYYLMRERAQAGRPLPAENYFYTNGDPGGLVNVAGVGVLVTSRASDAALALVD
YLLSEPAQRYFAEQTFEYPLLEGIPAHPDLPPLASLNPPALDLSDLDDLKGTLALLQEVGLL

Specific function: Part of the ABC transporter complex fbpABC (TC 3.A.1.10.1) involved in Fe(3+) ions import. This protein specifically binds Fe(3+) and is involved in its transmembrane transport [H]

COG id: COG1840

COG function: function code P; ABC-type Fe3+ transport system, periplasmic component

Gene ontology:

Cell location: Periplasm (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006059
- InterPro:   IPR006061 [H]

Pfam domain/function: PF01547 SBP_bac_1 [H]

EC number: NA

Molecular weight: Translated: 40718; Mature: 40718

Theoretical pI: Translated: 6.57; Mature: 6.57

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRRDLIRLGGLGLAAGWTLLAACRSTEPTATPAPPTPTAAGAGMAPTASPTPAAAATRT
CCCCCEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCC
AGATPTVMTRSQSAVVTIYSGRSKSLIGPLLDRIGQELGLDVRVRYGDTAELATAILEEG
CCCCCCEEECCCCEEEEEECCCCCHHHHHHHHHHHHHHCCEEEEEECCHHHHHHHHHHCC
DRSPADLFFGQDAGALGALAKEGRLAPLPSELLQRVPQPYRSPKGLWVGISGRVRTVIYN
CCCCHHEEECCCCCHHHHHHHCCCCCCCHHHHHHHCCHHHCCCCCEEEEECCCEEEEEEE
TERVKPEEIPASIVDFAGNERWRARLGWAPTNGSFQAFVTALRRLRGEDVARSWLQGVKA
CCCCCHHHCCHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHH
LDARVFPNNSSIVQATIKGEIEAGFVNHYYLMRERAQAGRPLPAENYFYTNGDPGGLVNV
HHCEECCCCCCEEEEEEECCEEECHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCEEEE
AGVGVLVTSRASDAALALVDYLLSEPAQRYFAEQTFEYPLLEGIPAHPDLPPLASLNPPA
CCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCCCCCCCCC
LDLSDLDDLKGTLALLQEVGLL
CCHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MRRRDLIRLGGLGLAAGWTLLAACRSTEPTATPAPPTPTAAGAGMAPTASPTPAAAATRT
CCCCCEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCC
AGATPTVMTRSQSAVVTIYSGRSKSLIGPLLDRIGQELGLDVRVRYGDTAELATAILEEG
CCCCCCEEECCCCEEEEEECCCCCHHHHHHHHHHHHHHCCEEEEEECCHHHHHHHHHHCC
DRSPADLFFGQDAGALGALAKEGRLAPLPSELLQRVPQPYRSPKGLWVGISGRVRTVIYN
CCCCHHEEECCCCCHHHHHHHCCCCCCCHHHHHHHCCHHHCCCCCEEEEECCCEEEEEEE
TERVKPEEIPASIVDFAGNERWRARLGWAPTNGSFQAFVTALRRLRGEDVARSWLQGVKA
CCCCCHHHCCHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHH
LDARVFPNNSSIVQATIKGEIEAGFVNHYYLMRERAQAGRPLPAENYFYTNGDPGGLVNV
HHCEECCCCCCEEEEEEECCEEECHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCEEEE
AGVGVLVTSRASDAALALVDYLLSEPAQRYFAEQTFEYPLLEGIPAHPDLPPLASLNPPA
CCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCCCCCCCCC
LDLSDLDDLKGTLALLQEVGLL
CCHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7542800; 7927717; 1556062; 10675023; 9360608; 11747438 [H]