| Definition | Thermomicrobium roseum DSM 5159 plasmid unnamed, complete sequence. |
|---|---|
| Accession | NC_011961 |
| Length | 917,738 |
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The map label for this gene is fbpB2 [H]
Identifier: 221635939
GI number: 221635939
Start: 525484
End: 527058
Strand: Reverse
Name: fbpB2 [H]
Synonym: trd_A0533
Alternate gene names: 221635939
Gene position: 527058-525484 (Counterclockwise)
Preceding gene: 221635940
Following gene: 221635938
Centisome position: 57.43
GC content: 65.14
Gene sequence:
>1575_bases GTGGTGATCCGCCCCAGCGAAGTCGTGGCGCTGGTCGTCGCGTCGATCGCCCTCGTACCTGTTCTTTACTTGGTTTGGCG CGCTCTGGAGGGAGGCGAGCGTGCGCTCGCCTCCCTCACCCATCCCCGTACTGCCTGGCTCGTATTGCGCAGTCTCGGAC TCGCTGTCGCGGTCGCGGCGAGCAGTGCGTTGGTCGCCTTCCCCTTGGCTGTCCTCACCGAACGAGTCGCTTTTCCTGGC CGGCGGTGGCTGGCGATCCTGCTCGCCGTACCGCTCGCCGTGCCGAGCTATGTCATGGCCTATGCGGTCGTGGCTGCGCT GGGTCCGCGAGGAACGCTCGCTTCGCTGCTCGAGCGGAGCATCGGACTCACTCGGCTACCGGAAGTGTACGGGTTCTTCG GGGCGTGGCTCACCTTGACCCTGGTGACCTATCCCTACACGTTCCTGGCACTGCGCGCGGCGTTGCGCGGACTGGATCCG GCCTTCGAGGAAGTCGCGCGCACACTCCACGCGGGACGCTGGGTAACGTTTTGGCGCGTCACCGTTCCGTTGCTGGGGCC AGCCTTGCTCTCCGGCATGCTGCTCACGACGCTCTATGTGCTCAGCGACTTCGGCGCGATCGCGATTCTCCGTTACCCGA CCCTGACCTACAGCATCTATAACCAGTACCGTCTCTCGTTCGACCGCTCGGCTGCGGCGGCACTGGCGGTGCTCCTGGTC GTCCTCTCAGCGATCCTGTTGATCGCCGAGCGGCACTGGCAGCGTCGCGCTGCTTTCTATCGCACCGTGGGGACTCGCCG TCCACCAGTCTTGCATAGGCCAGGCTGGGGGAGTTGGCTGGGACTGAGCCTGGCACTGCTTTGGGGCAGTTTTGCCATCG GTTTGCCCGCTGGCATGGCGACGTTCTGGTTCCTTCGCGCGCGGTCGTTGGGGGAACAGCTGCCCGGGATCGGGGAACCA CTCGCGAACTCCTTGCTGGTCGGAAGCGCAGCCGGACTCGTGACCGTCGCACTCGCGCTTCCTGTCGCCTGGGCGGTGGT GCGCGGGAACGGACGATACGTCTCGCTCATCGATTTGCCTCTCTGGATCGCCTATGGCCTCCCGGGCATCGTGCTGGCGT TGGCGTTGGTGTCGTTCAGCGTCCGCTTTCTCCCGTGGCTCTATCAGACGCTCCCGCTCTTGATCGTCGGATACGCGTTG CGCTTCCTGCCGGAAGCAACGGGGATACTGCGCGCTACGCTGGCACAACAGAATCCGCGGCTCGAAGAAGCAGCGCGGAC ACTGGGCCTTCGTCCCTGGCGCGCGTGGCTGACGGTGCAGTTCCCGCTGACTCTCCCGGGTATCGGGAGCGCCTTCGCGT TGGTTTTCCTGACGACCATCAAGGAACTCCCGGTGACGTTGCTGTTGAGTCCGATCGGTTTTACGACCTTGGCGACGGCA GTCTGGAACGCGACCGCCGATGCCTTTTGGTCGCACGCGGCACTGCCGACACTCCTGCTGCTGGGCATCGGTGTGGTACC GATGGCACTCTTCAGCTGGTGGCAAGAGCGCGGGGCGGGGAGGAGCAACGGGTGA
Upstream 100 bases:
>100_bases TCAAGGGAACACTGGCTCTCCTTCAGGAGGTCGGGCTCCTGTGACGGCGTCAGCAGGGCGAACGACCATCGCGCACTCGC TACGGCAGCGCTGGAGCCTC
Downstream 100 bases:
>100_bases GCGAAACGTGCGCGGTACGCTTGGCGGGAGTCTGGAAGTGGTACCGAGGGACAGTCGTTCCCGCTGTGCGGGATCTCTGG CTGGACGTGCGCGCCGGAGA
Product: binding-protein-dependent transport systems inner membrane component
Products: ADP; phosphate; MoO42- [Cytoplasm] [C]
Alternate protein names: Iron(III)-transport system permease protein fbpB 2 [H]
Number of amino acids: Translated: 524; Mature: 524
Protein sequence:
>524_residues MVIRPSEVVALVVASIALVPVLYLVWRALEGGERALASLTHPRTAWLVLRSLGLAVAVAASSALVAFPLAVLTERVAFPG RRWLAILLAVPLAVPSYVMAYAVVAALGPRGTLASLLERSIGLTRLPEVYGFFGAWLTLTLVTYPYTFLALRAALRGLDP AFEEVARTLHAGRWVTFWRVTVPLLGPALLSGMLLTTLYVLSDFGAIAILRYPTLTYSIYNQYRLSFDRSAAAALAVLLV VLSAILLIAERHWQRRAAFYRTVGTRRPPVLHRPGWGSWLGLSLALLWGSFAIGLPAGMATFWFLRARSLGEQLPGIGEP LANSLLVGSAAGLVTVALALPVAWAVVRGNGRYVSLIDLPLWIAYGLPGIVLALALVSFSVRFLPWLYQTLPLLIVGYAL RFLPEATGILRATLAQQNPRLEEAARTLGLRPWRAWLTVQFPLTLPGIGSAFALVFLTTIKELPVTLLLSPIGFTTLATA VWNATADAFWSHAALPTLLLLGIGVVPMALFSWWQERGAGRSNG
Sequences:
>Translated_524_residues MVIRPSEVVALVVASIALVPVLYLVWRALEGGERALASLTHPRTAWLVLRSLGLAVAVAASSALVAFPLAVLTERVAFPG RRWLAILLAVPLAVPSYVMAYAVVAALGPRGTLASLLERSIGLTRLPEVYGFFGAWLTLTLVTYPYTFLALRAALRGLDP AFEEVARTLHAGRWVTFWRVTVPLLGPALLSGMLLTTLYVLSDFGAIAILRYPTLTYSIYNQYRLSFDRSAAAALAVLLV VLSAILLIAERHWQRRAAFYRTVGTRRPPVLHRPGWGSWLGLSLALLWGSFAIGLPAGMATFWFLRARSLGEQLPGIGEP LANSLLVGSAAGLVTVALALPVAWAVVRGNGRYVSLIDLPLWIAYGLPGIVLALALVSFSVRFLPWLYQTLPLLIVGYAL RFLPEATGILRATLAQQNPRLEEAARTLGLRPWRAWLTVQFPLTLPGIGSAFALVFLTTIKELPVTLLLSPIGFTTLATA VWNATADAFWSHAALPTLLLLGIGVVPMALFSWWQERGAGRSNG >Mature_524_residues MVIRPSEVVALVVASIALVPVLYLVWRALEGGERALASLTHPRTAWLVLRSLGLAVAVAASSALVAFPLAVLTERVAFPG RRWLAILLAVPLAVPSYVMAYAVVAALGPRGTLASLLERSIGLTRLPEVYGFFGAWLTLTLVTYPYTFLALRAALRGLDP AFEEVARTLHAGRWVTFWRVTVPLLGPALLSGMLLTTLYVLSDFGAIAILRYPTLTYSIYNQYRLSFDRSAAAALAVLLV VLSAILLIAERHWQRRAAFYRTVGTRRPPVLHRPGWGSWLGLSLALLWGSFAIGLPAGMATFWFLRARSLGEQLPGIGEP LANSLLVGSAAGLVTVALALPVAWAVVRGNGRYVSLIDLPLWIAYGLPGIVLALALVSFSVRFLPWLYQTLPLLIVGYAL RFLPEATGILRATLAQQNPRLEEAARTLGLRPWRAWLTVQFPLTLPGIGSAFALVFLTTIKELPVTLLLSPIGFTTLATA VWNATADAFWSHAALPTLLLLGIGVVPMALFSWWQERGAGRSNG
Specific function: Part of the ABC transporter complex fbpABC (TC 3.A.1.10.1) involved in Fe(3+) ions import. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG1178
COG function: function code P; ABC-type Fe3+ transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 ABC transmembrane type-1 domains [H]
Homologues:
Organism=Escherichia coli, GI1786980, Length=208, Percent_Identity=30.7692307692308, Blast_Score=70, Evalue=2e-13, Organism=Escherichia coli, GI1788764, Length=186, Percent_Identity=33.3333333333333, Blast_Score=68, Evalue=1e-12, Organism=Escherichia coli, GI87082099, Length=245, Percent_Identity=28.1632653061224, Blast_Score=64, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 56776; Mature: 56776
Theoretical pI: Translated: 11.28; Mature: 11.28
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVIRPSEVVALVVASIALVPVLYLVWRALEGGERALASLTHPRTAWLVLRSLGLAVAVAA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHH SSALVAFPLAVLTERVAFPGRRWLAILLAVPLAVPSYVMAYAVVAALGPRGTLASLLERS HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH IGLTRLPEVYGFFGAWLTLTLVTYPYTFLALRAALRGLDPAFEEVARTLHAGRWVTFWRV CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCEEEHHHH TVPLLGPALLSGMLLTTLYVLSDFGAIAILRYPTLTYSIYNQYRLSFDRSAAAALAVLLV HHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHCCCHHHHHHHHHHHH VLSAILLIAERHWQRRAAFYRTVGTRRPPVLHRPGWGSWLGLSLALLWGSFAIGLPAGMA HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHH TFWFLRARSLGEQLPGIGEPLANSLLVGSAAGLVTVALALPVAWAVVRGNGRYVSLIDLP HHHHHHHHHHHHHCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHEECCCCEEEEEHHH LWIAYGLPGIVLALALVSFSVRFLPWLYQTLPLLIVGYALRFLPEATGILRATLAQQNPR HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC LEEAARTLGLRPWRAWLTVQFPLTLPGIGSAFALVFLTTIKELPVTLLLSPIGFTTLATA HHHHHHHHCCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHHHCCHHHHCCCCHHHHHHHH VWNATADAFWSHAALPTLLLLGIGVVPMALFSWWQERGAGRSNG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MVIRPSEVVALVVASIALVPVLYLVWRALEGGERALASLTHPRTAWLVLRSLGLAVAVAA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHH SSALVAFPLAVLTERVAFPGRRWLAILLAVPLAVPSYVMAYAVVAALGPRGTLASLLERS HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH IGLTRLPEVYGFFGAWLTLTLVTYPYTFLALRAALRGLDPAFEEVARTLHAGRWVTFWRV CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCEEEHHHH TVPLLGPALLSGMLLTTLYVLSDFGAIAILRYPTLTYSIYNQYRLSFDRSAAAALAVLLV HHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHCCCHHHHHHHHHHHH VLSAILLIAERHWQRRAAFYRTVGTRRPPVLHRPGWGSWLGLSLALLWGSFAIGLPAGMA HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHH TFWFLRARSLGEQLPGIGEPLANSLLVGSAAGLVTVALALPVAWAVVRGNGRYVSLIDLP HHHHHHHHHHHHHCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHEECCCCEEEEEHHH LWIAYGLPGIVLALALVSFSVRFLPWLYQTLPLLIVGYALRFLPEATGILRATLAQQNPR HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC LEEAARTLGLRPWRAWLTVQFPLTLPGIGSAFALVFLTTIKELPVTLLLSPIGFTTLATA HHHHHHHHCCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHHHCCHHHHCCCCHHHHHHHH VWNATADAFWSHAALPTLLLLGIGVVPMALFSWWQERGAGRSNG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; MoO42- [Periplasm]; H2O [C]
Specific reaction: ATP + MoO42- [Periplasm] + H2O = ADP + phosphate + MoO42- [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7542800; 7927717 [H]