| Definition | Thermomicrobium roseum DSM 5159 plasmid unnamed, complete sequence. |
|---|---|
| Accession | NC_011961 |
| Length | 917,738 |
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The map label for this gene is 221635890
Identifier: 221635890
GI number: 221635890
Start: 472926
End: 473387
Strand: Reverse
Name: 221635890
Synonym: trd_A0484
Alternate gene names: NA
Gene position: 473387-472926 (Counterclockwise)
Preceding gene: 221635891
Following gene: 221635889
Centisome position: 51.58
GC content: 66.45
Gene sequence:
>462_bases ATGAGGGGTCTCGGTCACGCCACATTGGCTGGTTTGGCCGGTGCCGTCGCTTTCCTTTTCGCTATGGCCGTCGATCTCGC GGTCCTGCGCCGACGGACCAACGATCTCCGGCTCCTGGCCGGGCTGCTTCCGGGAGGAGCTCGCTTTTGGCCGTTGCTCG GGACGCTCATGCACCTGGCCAACGGTGCAGCGCTCGGTGTCCTCTACGGGCGCCTGCGGCGTGTGTTTCCGTTCTCTGGT TGGCTCGCCGGATCGCTCTTCGCGCTCGCCGAGAATCTGGCACTCTGGCCGATCGTCGCGCTGCTCGATCGCGTCCATCC GGAAATCCGTGCTGGCCGCCTGGAGCCCTTCAACCGGCCGGTCCCGTTCCTCCAAGAAGTCTGGCGGCACCTGGCGTATG GCCTGACACTCGGCATCCTCTACGACCGCTGGCAGCGGAAGGAGGGCGAGCCGGCACCATGA
Upstream 100 bases:
>100_bases TCCTGACTCCACCGCTCCTGGTTTGGTTGCTTCGCCCGCTGATCGCCGCGCGCCGGGCTGAACTTGCCACCACCACCGGG CACGTGGAGGGAGCCACGTC
Downstream 100 bases:
>100_bases ACGCGGCGCTCCTCGCCCGGCCCATGCTCCTCGAACCGGTCCTGGTCGAGCGCCCCTGGGGCGACCAGCGTCTGGCGCGC TACCTCGGCAAATCGCTGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 153; Mature: 153
Protein sequence:
>153_residues MRGLGHATLAGLAGAVAFLFAMAVDLAVLRRRTNDLRLLAGLLPGGARFWPLLGTLMHLANGAALGVLYGRLRRVFPFSG WLAGSLFALAENLALWPIVALLDRVHPEIRAGRLEPFNRPVPFLQEVWRHLAYGLTLGILYDRWQRKEGEPAP
Sequences:
>Translated_153_residues MRGLGHATLAGLAGAVAFLFAMAVDLAVLRRRTNDLRLLAGLLPGGARFWPLLGTLMHLANGAALGVLYGRLRRVFPFSG WLAGSLFALAENLALWPIVALLDRVHPEIRAGRLEPFNRPVPFLQEVWRHLAYGLTLGILYDRWQRKEGEPAP >Mature_153_residues MRGLGHATLAGLAGAVAFLFAMAVDLAVLRRRTNDLRLLAGLLPGGARFWPLLGTLMHLANGAALGVLYGRLRRVFPFSG WLAGSLFALAENLALWPIVALLDRVHPEIRAGRLEPFNRPVPFLQEVWRHLAYGLTLGILYDRWQRKEGEPAP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16885; Mature: 16885
Theoretical pI: Translated: 11.70; Mature: 11.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRGLGHATLAGLAGAVAFLFAMAVDLAVLRRRTNDLRLLAGLLPGGARFWPLLGTLMHLA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHH NGAALGVLYGRLRRVFPFSGWLAGSLFALAENLALWPIVALLDRVHPEIRAGRLEPFNRP CCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCCCCCCC VPFLQEVWRHLAYGLTLGILYDRWQRKEGEPAP CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MRGLGHATLAGLAGAVAFLFAMAVDLAVLRRRTNDLRLLAGLLPGGARFWPLLGTLMHLA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHH NGAALGVLYGRLRRVFPFSGWLAGSLFALAENLALWPIVALLDRVHPEIRAGRLEPFNRP CCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCCCCCCC VPFLQEVWRHLAYGLTLGILYDRWQRKEGEPAP CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA