| Definition | Thermomicrobium roseum DSM 5159 plasmid unnamed, complete sequence. |
|---|---|
| Accession | NC_011961 |
| Length | 917,738 |
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The map label for this gene is 221635791
Identifier: 221635791
GI number: 221635791
Start: 370258
End: 370674
Strand: Reverse
Name: 221635791
Synonym: trd_A0385
Alternate gene names: NA
Gene position: 370674-370258 (Counterclockwise)
Preceding gene: 221635792
Following gene: 221635787
Centisome position: 40.39
GC content: 63.79
Gene sequence:
>417_bases ATGACGTCAGTTCGCCGGGCTTCGTATACACCACTCCGCTGCCCGCTCTGTGGCGGCGAACTCGAAGAGGTCGTCGTTCG CCAGCTCGGGCGTGTGACCGCACGTTTGCCCTGGCAACTTCATGCCGGACGTTGCCCTGAGCACGGCTGGTTTCAGGCCG AAGTCATCAGCCGGCCCCCTCGCGAAATTTTCCCCGTCAATCGCCCAGGTGGGATCGCCCGTCGCATCGTCTTGGAGGGC AAGGAGATCTACGCGTTCCCGACGATCTGGAACCGGTTGGATACGCGGCAAGAAGTCGACCCCTTCGACACCCGCTACTG GCAGATCGATTGGGAACGACTCGGTATTCGCCCTCCCACTCGTGCGGTCCAACCGGAACTGGTCGAGACGCTCGCGGGGA GCCGCCGGCGTGCCTGA
Upstream 100 bases:
>100_bases CATGCTCGCCGCCGCGGACCGAGCGACTGCATGCTATGATCGTGCCGGATCGCTCCGGGCCGGAGCGCTGAGCCGGGTCG GTGTGAGGGAACGCTGAGCC
Downstream 100 bases:
>100_bases ACTCCCCGAGGTCGAAGCGGCACGGCGCGGCATCGCCGAGCAGCTGCTCGGCCGCGTCTGTACGGGCTACGAACTGTATC GCCCCCGACTCATCGTTGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 138; Mature: 137
Protein sequence:
>138_residues MTSVRRASYTPLRCPLCGGELEEVVVRQLGRVTARLPWQLHAGRCPEHGWFQAEVISRPPREIFPVNRPGGIARRIVLEG KEIYAFPTIWNRLDTRQEVDPFDTRYWQIDWERLGIRPPTRAVQPELVETLAGSRRRA
Sequences:
>Translated_138_residues MTSVRRASYTPLRCPLCGGELEEVVVRQLGRVTARLPWQLHAGRCPEHGWFQAEVISRPPREIFPVNRPGGIARRIVLEG KEIYAFPTIWNRLDTRQEVDPFDTRYWQIDWERLGIRPPTRAVQPELVETLAGSRRRA >Mature_137_residues TSVRRASYTPLRCPLCGGELEEVVVRQLGRVTARLPWQLHAGRCPEHGWFQAEVISRPPREIFPVNRPGGIARRIVLEGK EIYAFPTIWNRLDTRQEVDPFDTRYWQIDWERLGIRPPTRAVQPELVETLAGSRRRA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16028; Mature: 15896
Theoretical pI: Translated: 10.24; Mature: 10.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSVRRASYTPLRCPLCGGELEEVVVRQLGRVTARLPWQLHAGRCPEHGWFQAEVISRPP CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCEEEHHHCCCC REIFPVNRPGGIARRIVLEGKEIYAFPTIWNRLDTRQEVDPFDTRYWQIDWERLGIRPPT HHHCCCCCCCCCEEEEEECCCEEEECHHHHHHHCCCCCCCCCCCEEEEEEHHHCCCCCCC RAVQPELVETLAGSRRRA CCCCHHHHHHHHCCCCCC >Mature Secondary Structure TSVRRASYTPLRCPLCGGELEEVVVRQLGRVTARLPWQLHAGRCPEHGWFQAEVISRPP CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCEEEHHHCCCC REIFPVNRPGGIARRIVLEGKEIYAFPTIWNRLDTRQEVDPFDTRYWQIDWERLGIRPPT HHHCCCCCCCCCEEEEEECCCEEEECHHHHHHHCCCCCCCCCCCEEEEEEHHHCCCCCCC RAVQPELVETLAGSRRRA CCCCHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA