| Definition | Thermomicrobium roseum DSM 5159 plasmid unnamed, complete sequence. |
|---|---|
| Accession | NC_011961 |
| Length | 917,738 |
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The map label for this gene is tauA [C]
Identifier: 221635737
GI number: 221635737
Start: 318824
End: 319936
Strand: Reverse
Name: tauA [C]
Synonym: trd_A0331
Alternate gene names: 221635737
Gene position: 319936-318824 (Counterclockwise)
Preceding gene: 221635738
Following gene: 221635736
Centisome position: 34.86
GC content: 59.12
Gene sequence:
>1113_bases ATGAATCGCCGTACATTCGTCCGCACGGCTCTTCTGGGCACAGTGTCGTCATACCTTCTCGCTGCTTGTGGTGGCGGTGG CAACCCCACACCCACGCCCCAAGCAGCAGCGCCTGCCCCCTCGCCGACACCGATGCCGATGGCCACTCCGACGCCAGCGC CCGCTCCCACCGCGACACCGACGGTCGCGCCCACTCCGACACCCGCTCCGCCACCGACCCTCCGCTTCGCCTACCTCCGA CTCGGCTGGGCAGGCTGCGAAGCGATCGACGAACTCAAACTTCTCAAGGAACGCGGCTGGAATATCGAGTGGTCACGCAT CGACCAGATCAGTGCACTGGCCAACGCCTATGCTGCTGGCCAAGCGGAGATCATCGACATGTCCGCCATCATCGCAGCCC AAATGCACGAAAAAGGTGTCGAGTTCAAGATCTTCAGCGCTGCAGTCGGAACGCTCGGTGCCATTCTCGTGCGCGCCGAC CTCAACGACATCAGCAGTGTTCCAGACCTCCGTGGGCGAAAGGTCGCGGGTGTCCCCGGCGGCACGACAACGCAAGACAT CAATGCAATGGTCCGTAAACTGTACAATATGGATCTCTTTACCGACACACAATTCGTTCAGGCTTCTGCACCGCCCGACG TCGCCAATCTGATCATCAACAAGAATGTCGATGCCGTGCTCATCTGGGAGCCCACGACTTCACGGCTCACCGAGAGTGGA GTCGCCAAGATCCTCGTCACCCAACAAGAGCTGTGGAAGCAGGTATCCGGATCGCCGAATCCGCAAGTTCATGTCGTCTA CCTTGCCCGGCCCGATCTTCTGGAGAAGTACCCGAAACTCGCCAAGGACATCATCGAAGCGCAGCAGACCGTCGCTGACA TGTGGAAGAAGCAAGACGAAAAGGTCATCCAGGCTTTCGCCACGGTAACCCAGTTACCGCCCGATATCGTGAAGGTCGCG TTGTCGCGAACGACTCCTCTCGCTGGACTCGGCAAGGATCTTCAGGAAACACTGCTCGCACAGTGGCGCTTCAATCGTGA ATCAGGCGTGCTTCTGCAGTCTGACATATGGCTCGATCCAGAGAAAGCACGCAAGCTCTTCTGGACAGAGTGA
Upstream 100 bases:
>100_bases GTACATGACGGCTTTGTAATGCATACCGAAGTGAAGAAGGCTTCCGCGCACTGTCGATCGAGCTGGAAAGTTACCTCAGA CTGAGAGGAGGAGACCCGAG
Downstream 100 bases:
>100_bases TTTCGGGGAGGCCTGGATGAACCCGACTCTCCTCTCCTCGATAGTCGATCATGCGGCCGAAAGCGATCCCGCGCGGCCCT TCCTCCAGTGGCACCAGGCT
Product: ABC transporter, quaternary amine uptake transporter (QAT) family, substrate-binding protein
Products: taurine [Cytoplasm]; ADP; phosphate [C]
Alternate protein names: NA
Number of amino acids: Translated: 370; Mature: 370
Protein sequence:
>370_residues MNRRTFVRTALLGTVSSYLLAACGGGGNPTPTPQAAAPAPSPTPMPMATPTPAPAPTATPTVAPTPTPAPPPTLRFAYLR LGWAGCEAIDELKLLKERGWNIEWSRIDQISALANAYAAGQAEIIDMSAIIAAQMHEKGVEFKIFSAAVGTLGAILVRAD LNDISSVPDLRGRKVAGVPGGTTTQDINAMVRKLYNMDLFTDTQFVQASAPPDVANLIINKNVDAVLIWEPTTSRLTESG VAKILVTQQELWKQVSGSPNPQVHVVYLARPDLLEKYPKLAKDIIEAQQTVADMWKKQDEKVIQAFATVTQLPPDIVKVA LSRTTPLAGLGKDLQETLLAQWRFNRESGVLLQSDIWLDPEKARKLFWTE
Sequences:
>Translated_370_residues MNRRTFVRTALLGTVSSYLLAACGGGGNPTPTPQAAAPAPSPTPMPMATPTPAPAPTATPTVAPTPTPAPPPTLRFAYLR LGWAGCEAIDELKLLKERGWNIEWSRIDQISALANAYAAGQAEIIDMSAIIAAQMHEKGVEFKIFSAAVGTLGAILVRAD LNDISSVPDLRGRKVAGVPGGTTTQDINAMVRKLYNMDLFTDTQFVQASAPPDVANLIINKNVDAVLIWEPTTSRLTESG VAKILVTQQELWKQVSGSPNPQVHVVYLARPDLLEKYPKLAKDIIEAQQTVADMWKKQDEKVIQAFATVTQLPPDIVKVA LSRTTPLAGLGKDLQETLLAQWRFNRESGVLLQSDIWLDPEKARKLFWTE >Mature_370_residues MNRRTFVRTALLGTVSSYLLAACGGGGNPTPTPQAAAPAPSPTPMPMATPTPAPAPTATPTVAPTPTPAPPPTLRFAYLR LGWAGCEAIDELKLLKERGWNIEWSRIDQISALANAYAAGQAEIIDMSAIIAAQMHEKGVEFKIFSAAVGTLGAILVRAD LNDISSVPDLRGRKVAGVPGGTTTQDINAMVRKLYNMDLFTDTQFVQASAPPDVANLIINKNVDAVLIWEPTTSRLTESG VAKILVTQQELWKQVSGSPNPQVHVVYLARPDLLEKYPKLAKDIIEAQQTVADMWKKQDEKVIQAFATVTQLPPDIVKVA LSRTTPLAGLGKDLQETLLAQWRFNRESGVLLQSDIWLDPEKARKLFWTE
Specific function: Part Of A Binding-Protein-Dependent Transport System For Taurine. [C]
COG id: COG0715
COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40135; Mature: 40135
Theoretical pI: Translated: 7.41; Mature: 7.41
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNRRTFVRTALLGTVSSYLLAACGGGGNPTPTPQAAAPAPSPTPMPMATPTPAPAPTATP CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC TVAPTPTPAPPPTLRFAYLRLGWAGCEAIDELKLLKERGWNIEWSRIDQISALANAYAAG CCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCC QAEIIDMSAIIAAQMHEKGVEFKIFSAAVGTLGAILVRADLNDISSVPDLRGRKVAGVPG CCCEEHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHEECCHHHHHCCCCCCCCEEECCCC GTTTQDINAMVRKLYNMDLFTDTQFVQASAPPDVANLIINKNVDAVLIWEPTTSRLTESG CCCHHHHHHHHHHHHCCCCCCCCCEEECCCCCHHHHHEECCCCCEEEEECCCHHHHHHHC VAKILVTQQELWKQVSGSPNPQVHVVYLARPDLLEKYPKLAKDIIEAQQTVADMWKKQDE HHHEEECHHHHHHHHCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KVIQAFATVTQLPPDIVKVALSRTTPLAGLGKDLQETLLAQWRFNRESGVLLQSDIWLDP HHHHHHHHHHHCCHHHHHHHHHCCCCCHHCCHHHHHHHHHHHHCCCCCCEEEECCCCCCH EKARKLFWTE HHHHHHCCCC >Mature Secondary Structure MNRRTFVRTALLGTVSSYLLAACGGGGNPTPTPQAAAPAPSPTPMPMATPTPAPAPTATP CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC TVAPTPTPAPPPTLRFAYLRLGWAGCEAIDELKLLKERGWNIEWSRIDQISALANAYAAG CCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCC QAEIIDMSAIIAAQMHEKGVEFKIFSAAVGTLGAILVRADLNDISSVPDLRGRKVAGVPG CCCEEHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHEECCHHHHHCCCCCCCCEEECCCC GTTTQDINAMVRKLYNMDLFTDTQFVQASAPPDVANLIINKNVDAVLIWEPTTSRLTESG CCCHHHHHHHHHHHHCCCCCCCCCEEECCCCCHHHHHEECCCCCEEEEECCCHHHHHHHC VAKILVTQQELWKQVSGSPNPQVHVVYLARPDLLEKYPKLAKDIIEAQQTVADMWKKQDE HHHEEECHHHHHHHHCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KVIQAFATVTQLPPDIVKVALSRTTPLAGLGKDLQETLLAQWRFNRESGVLLQSDIWLDP HHHHHHHHHHHCCHHHHHHHHHCCCCCHHCCHHHHHHHHHHHHCCCCCCEEEECCCCCCH EKARKLFWTE HHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: taurine [Periplasm]; ATP; H2O [C]
Specific reaction: taurine [Periplasm] + ATP + H2O = taurine [Cytoplasm] + ADP + phosphate [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA