Click here to switch to the map view.

The map label for this gene is ssuC [H]

Identifier: 221635738

GI number: 221635738

Start: 320064

End: 320873

Strand: Reverse

Name: ssuC [H]

Synonym: trd_A0332

Alternate gene names: 221635738

Gene position: 320873-320064 (Counterclockwise)

Preceding gene: 221635739

Following gene: 221635737

Centisome position: 34.96

GC content: 57.28

Gene sequence:

>810_bases
ATGGTGATCGGGTCATCCACTCGCCGTCTCGTCGGGAAGCAAGCAGAGTCCAGTCTTACGGGGTTCGGCCTCCTGCGGCG
CTTTGCACCGACTATCCTGGTTCTTCTTCTGTTTGTTGTTTTATGGCTAGTCGTGGCGAGTCGAACCAGTCCCTACGTCC
TACCGAGCCCTGTCTCGGTCTTTCGCCAGCTTGTCACGCTTTTCGTCGATGGCACTGTCTGGACACACGTCGGTGCTACC
CTGTACCGCGTCACCGCAGGATTCCTCTTGGGCACTGTTCTCGCTCTTCTGCTCGGGCTCGTAGCCAGCTCCAGCCCGGT
CCTTCGACTCGTTCTTCGCGACCTTTCGTCCATTCTCAACGCAACATCGGTCTTCGTCTGGATCGTCCTCGCACTGATCT
GGTTCGGGCTCACCGACCGTGCTCCCATTTTCACGACGCTCATGATCACTATCCCCGTCCTCATGAGTAACGTCTTCGAG
GCCATCGATAGCCTCGATCGTCGGCTGTTGGAAATGGCGTCCGTTTACCGCTTCACGGCACTCGATCGGTTCGTGCACAT
CACTTTTCCATCGGTGATTCCGTATCTCTTCGCTGGTATGCGCGTTGCCTTTGCACTCGGCTTGCGCGTTTCAGTCGTGG
CAGAGATCTTCGGCGTTTCCACCGGAGTCGGATACATGATGAACTTCGCTCGCGACACGCTCCGTACCGATGCGGTATTC
GCCTGGGCGCTCATCCTCATCACCATGATGCTCCTCGTCGACAACATCATCTTCTCTCCCCTTTTGCGGTGGCTGACCCG
ATGGCGATGA

Upstream 100 bases:

>100_bases
TCTCGAACAGTGCCTCAGTTCGGACGACGTCGCCCGTGCTCGTGCCTTGTGGATGGAACGGAAGCAAAGCCGAACCGCCC
AACGCCCATAGGAGGGATCG

Downstream 100 bases:

>100_bases
ATCATGCCTGGTTCGAGGAGGAGGTGCGTACATGACGGCTTTGTAATGCATACCGAAGTGAAGAAGGCTTCCGCGCACTG
TCGATCGAGCTGGAAAGTTA

Product: ABC nitrate/sulfonate/bicarbonate family transporter, inner membrane subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 269; Mature: 269

Protein sequence:

>269_residues
MVIGSSTRRLVGKQAESSLTGFGLLRRFAPTILVLLLFVVLWLVVASRTSPYVLPSPVSVFRQLVTLFVDGTVWTHVGAT
LYRVTAGFLLGTVLALLLGLVASSSPVLRLVLRDLSSILNATSVFVWIVLALIWFGLTDRAPIFTTLMITIPVLMSNVFE
AIDSLDRRLLEMASVYRFTALDRFVHITFPSVIPYLFAGMRVAFALGLRVSVVAEIFGVSTGVGYMMNFARDTLRTDAVF
AWALILITMMLLVDNIIFSPLLRWLTRWR

Sequences:

>Translated_269_residues
MVIGSSTRRLVGKQAESSLTGFGLLRRFAPTILVLLLFVVLWLVVASRTSPYVLPSPVSVFRQLVTLFVDGTVWTHVGAT
LYRVTAGFLLGTVLALLLGLVASSSPVLRLVLRDLSSILNATSVFVWIVLALIWFGLTDRAPIFTTLMITIPVLMSNVFE
AIDSLDRRLLEMASVYRFTALDRFVHITFPSVIPYLFAGMRVAFALGLRVSVVAEIFGVSTGVGYMMNFARDTLRTDAVF
AWALILITMMLLVDNIIFSPLLRWLTRWR
>Mature_269_residues
MVIGSSTRRLVGKQAESSLTGFGLLRRFAPTILVLLLFVVLWLVVASRTSPYVLPSPVSVFRQLVTLFVDGTVWTHVGAT
LYRVTAGFLLGTVLALLLGLVASSSPVLRLVLRDLSSILNATSVFVWIVLALIWFGLTDRAPIFTTLMITIPVLMSNVFE
AIDSLDRRLLEMASVYRFTALDRFVHITFPSVIPYLFAGMRVAFALGLRVSVVAEIFGVSTGVGYMMNFARDTLRTDAVF
AWALILITMMLLVDNIIFSPLLRWLTRWR

Specific function: Part of a binding-protein-dependent transport system for aliphatic sulfonates. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0600

COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI87081802, Length=220, Percent_Identity=30.9090909090909, Blast_Score=89, Evalue=4e-19,
Organism=Escherichia coli, GI1786564, Length=225, Percent_Identity=25.7777777777778, Blast_Score=80, Evalue=2e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 29920; Mature: 29920

Theoretical pI: Translated: 11.59; Mature: 11.59

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure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HHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10506196; 8905232; 9278503 [H]