| Definition | Thermomicrobium roseum DSM 5159 plasmid unnamed, complete sequence. |
|---|---|
| Accession | NC_011961 |
| Length | 917,738 |
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The map label for this gene is dmpB [H]
Identifier: 221635733
GI number: 221635733
Start: 313789
End: 314685
Strand: Reverse
Name: dmpB [H]
Synonym: trd_A0327
Alternate gene names: 221635733
Gene position: 314685-313789 (Counterclockwise)
Preceding gene: 221635734
Following gene: 221635732
Centisome position: 34.29
GC content: 56.86
Gene sequence:
>897_bases ATGGCCCTGTGGTTGACCCATGTCGGCGTTCGCGTGCCGAATCTGCAGGACTCCATCGAGTTTCACACGTCCGTGCTGGG TCTCACGGTACTGTCGCGAGAAAGCGACAGAGCATATCTCAGCTGCGGATACGATCGCTCTGTTGACCTTTGTCTCGTTA CCGGCGGCACGGGTCTCGATCATGTCGCTTTTGGCGTCACCGACGAACGCGAACTGGACACCCTCGCTTCTCGACTCCTC GACCACGGAGCCGAACTCGTTCCATCTGCCTCTCCAGAGCCTGGGGTGAACAAGGCGACGCGACTCCGCCTCCCCTCAGG CCATCTCCTCGAGTTCGTCATCATAGAACCCGATCCAGAACAACGATTCACCTATCCGCACCCTGCAGCACCACCCATGA CCCATCGTTCGGTAGTTCTCTTGATCGATTTGGATCATGTAACACTCCGGCACACGGATGTATCAGGCTTGGCGCTCTTT CTCCAGAATAGCCTCGGTTTTCACATCCCTGATGCACGCTTGATGCCAGATGGGCAGTGGCGCGCCGCGTGGCTTCATGT GACATCCCAGCACCACGATCTCGCCATCATTCGGGGAGACGCTGGTGAAACACTCGACCATGTTGCCTTCCGCGTCAGCG GAATCGAGACCATGAAGTATCTGGCTGATCGCCTAGCTTCCTTCGGCATGACGATCGAAGTTGGACCAGGTCGTCACAGC ATCGGCGGGAACCTCTTTACCTACTTTTGGACTCCAGACGGTAACCGTTATGAGCTTTCTGCAGAAATGGCGATGGTTTC GAACACTGCCTCACCCACTCGTTTTTGGGGCGATGATCCCGGGCTCTTTTCCCCTTGGGGCATCCGTCCTCCTGAGTCGT TCCGGAAAGGATCATGA
Upstream 100 bases:
>100_bases TGCTGGATGCCAAGGTCAACCCAGCGGTACGCGGCGGAGAATGGTTCGATCTGGCTTTCGAGGGTCACTAACTCGGTGTT CTGTTTGGAAAGGAGGACAC
Downstream 100 bases:
>100_bases GAATGGATGTCATATCTCACAGCGCTACGCACGACGTCTTCGACACGACGATCATCGGCGGGGGGCCGGTCGGGTTGTTT GCCGCCTTCTACGCCGGCAT
Product: catechol 2,3-dioxygenase
Products: NA
Alternate protein names: MPC; CatO2ase; Catechol 2,3-dioxygenase; C23O [H]
Number of amino acids: Translated: 298; Mature: 297
Protein sequence:
>298_residues MALWLTHVGVRVPNLQDSIEFHTSVLGLTVLSRESDRAYLSCGYDRSVDLCLVTGGTGLDHVAFGVTDERELDTLASRLL DHGAELVPSASPEPGVNKATRLRLPSGHLLEFVIIEPDPEQRFTYPHPAAPPMTHRSVVLLIDLDHVTLRHTDVSGLALF LQNSLGFHIPDARLMPDGQWRAAWLHVTSQHHDLAIIRGDAGETLDHVAFRVSGIETMKYLADRLASFGMTIEVGPGRHS IGGNLFTYFWTPDGNRYELSAEMAMVSNTASPTRFWGDDPGLFSPWGIRPPESFRKGS
Sequences:
>Translated_298_residues MALWLTHVGVRVPNLQDSIEFHTSVLGLTVLSRESDRAYLSCGYDRSVDLCLVTGGTGLDHVAFGVTDERELDTLASRLL DHGAELVPSASPEPGVNKATRLRLPSGHLLEFVIIEPDPEQRFTYPHPAAPPMTHRSVVLLIDLDHVTLRHTDVSGLALF LQNSLGFHIPDARLMPDGQWRAAWLHVTSQHHDLAIIRGDAGETLDHVAFRVSGIETMKYLADRLASFGMTIEVGPGRHS IGGNLFTYFWTPDGNRYELSAEMAMVSNTASPTRFWGDDPGLFSPWGIRPPESFRKGS >Mature_297_residues ALWLTHVGVRVPNLQDSIEFHTSVLGLTVLSRESDRAYLSCGYDRSVDLCLVTGGTGLDHVAFGVTDERELDTLASRLLD HGAELVPSASPEPGVNKATRLRLPSGHLLEFVIIEPDPEQRFTYPHPAAPPMTHRSVVLLIDLDHVTLRHTDVSGLALFL QNSLGFHIPDARLMPDGQWRAAWLHVTSQHHDLAIIRGDAGETLDHVAFRVSGIETMKYLADRLASFGMTIEVGPGRHSI GGNLFTYFWTPDGNRYELSAEMAMVSNTASPTRFWGDDPGLFSPWGIRPPESFRKGS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the extradiol ring-cleavage dioxygenase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017624 - InterPro: IPR004360 - InterPro: IPR000486 [H]
Pfam domain/function: PF00903 Glyoxalase [H]
EC number: =1.13.11.2 [H]
Molecular weight: Translated: 32897; Mature: 32765
Theoretical pI: Translated: 5.96; Mature: 5.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALWLTHVGVRVPNLQDSIEFHTSVLGLTVLSRESDRAYLSCGYDRSVDLCLVTGGTGLD CEEEEEECCEECCCCHHHHHHHHHHEEEEEEECCCCCEEEEECCCCCCEEEEEECCCCCC HVAFGVTDERELDTLASRLLDHGAELVPSASPEPGVNKATRLRLPSGHLLEFVIIEPDPE CEEECCCCCHHHHHHHHHHHHCCHHHCCCCCCCCCCCCEEEEECCCCCEEEEEEECCCCC QRFTYPHPAAPPMTHRSVVLLIDLDHVTLRHTDVSGLALFLQNSLGFHIPDARLMPDGQW CCCCCCCCCCCCCCCCEEEEEEEECCEEEEECCHHHHEEEECCCCCCCCCCCEECCCCCE RAAWLHVTSQHHDLAIIRGDAGETLDHVAFRVSGIETMKYLADRLASFGMTIEVGPGRHS EEEEEEEECCCCEEEEEECCCCCCHHHHHEECCCHHHHHHHHHHHHHCCCEEEECCCCCC IGGNLFTYFWTPDGNRYELSAEMAMVSNTASPTRFWGDDPGLFSPWGIRPPESFRKGS CCCCEEEEEECCCCCEEEEEEEEEEEECCCCCCEECCCCCCCCCCCCCCCCHHHCCCC >Mature Secondary Structure ALWLTHVGVRVPNLQDSIEFHTSVLGLTVLSRESDRAYLSCGYDRSVDLCLVTGGTGLD EEEEEECCEECCCCHHHHHHHHHHEEEEEEECCCCCEEEEECCCCCCEEEEEECCCCCC HVAFGVTDERELDTLASRLLDHGAELVPSASPEPGVNKATRLRLPSGHLLEFVIIEPDPE CEEECCCCCHHHHHHHHHHHHCCHHHCCCCCCCCCCCCEEEEECCCCCEEEEEEECCCCC QRFTYPHPAAPPMTHRSVVLLIDLDHVTLRHTDVSGLALFLQNSLGFHIPDARLMPDGQW CCCCCCCCCCCCCCCCEEEEEEEECCEEEEECCHHHHEEEECCCCCCCCCCCEECCCCCE RAAWLHVTSQHHDLAIIRGDAGETLDHVAFRVSGIETMKYLADRLASFGMTIEVGPGRHS EEEEEEEECCCCEEEEEECCCCCCHHHHHEECCCHHHHHHHHHHHHHCCCEEEECCCCCC IGGNLFTYFWTPDGNRYELSAEMAMVSNTASPTRFWGDDPGLFSPWGIRPPESFRKGS CCCCEEEEEECCCCCEEEEEEEEEEEECCCCCCEECCCCCCCCCCCCCCCCHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2620833; 2194577 [H]