Definition Thermomicrobium roseum DSM 5159 plasmid unnamed, complete sequence.
Accession NC_011961
Length 917,738

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The map label for this gene is 221635724

Identifier: 221635724

GI number: 221635724

Start: 304158

End: 305006

Strand: Reverse

Name: 221635724

Synonym: trd_A0318

Alternate gene names: NA

Gene position: 305006-304158 (Counterclockwise)

Preceding gene: 221635725

Following gene: 221635723

Centisome position: 33.23

GC content: 66.2

Gene sequence:

>849_bases
ATGATGCGAGAGTCGCGGTCGATCGTCCAGATCGTCAACGCCGAACGGATCGTCGTCCTGGGGTGGGGTCGAGCGATCCT
CGCCCAACTCGCTCATCCTCTCGTCGCAGCGGGGGTCGCCGAGCATTCGTCGTTCGCCCGCGATACCTGGTCAGCCTTCC
GACGCTTTCGCGCAACGGTGAACGCGATGCGCGCCCTCACCTTCGGCTCCCCCGAGGCAGCCCGAGCAGCCGCTGCCCGC
ATCATCCGCACTCACGACCGCGTACGAGGCATGCTCCGGGAGCCGAGCGGTCGCTTTCCAGCCGGTACCCGGTACAGCGC
GCACGATCCTGATCTCCTCGTCTGGGTGCACACCACGACCGTCGAAGCGACGATCACGGCATACGAGCGTTTCGTCCGCG
TGCTCACCCCGGAGGAGCGAGACCGCTATTGTCGTGAAGCGAGCGCGATGGAGTTTTGGCTGGGCATACCCAATGGGTAC
CTTCCTCGCTCCTGGGGGGAGATCGAGGAAAAGATCACCCGAGCACGCCGGGAGGGGACACTCGCCGTCACACCGCTCAC
GCGACAACTCGCCGACTCCGTCCTTTCCCCACCGCATCCCTGGTGGCTCGCCCCGAGCGTCCGCGTCTGGCGTTGGCTGA
CCATCGGTTTTCTGCCCGACTGGCTCCGCGCGGCCTATGGCTTCAGCTGGTCAGCTCATGACGATGAGCGGTTCGAGCGC
TACGCTCGTGCGATCCGCTCGCTCTGGTCGCGACTTCCCGCGCTCGTCCGCACCTGGCCAGAAGCACGGTCTGCCCAGTC
ACTCGCCCTTCCCCCAGATGGCATGACGAGCGTGGGAGCACCGCAGTGA

Upstream 100 bases:

>100_bases
CGTACCGACTCTGGTCATCGCGGCTGTTGCTCGTCGCTCGCACGGCCAGCGAGCCATCCCAGCCCCTGGTGGTCGGGAGC
GATTCGGAGAGTTCGTCCGC

Downstream 100 bases:

>100_bases
GGGGCTTCTTCGCTTTTGTCCGCCGCTTCGGCGTTCCCTTCGGTCTGCTCGCTCTGAGTGTCGCGATCGCTGGCGCGACA
CTGGCGCGCTACGCAGCCCC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 282; Mature: 282

Protein sequence:

>282_residues
MMRESRSIVQIVNAERIVVLGWGRAILAQLAHPLVAAGVAEHSSFARDTWSAFRRFRATVNAMRALTFGSPEAARAAAAR
IIRTHDRVRGMLREPSGRFPAGTRYSAHDPDLLVWVHTTTVEATITAYERFVRVLTPEERDRYCREASAMEFWLGIPNGY
LPRSWGEIEEKITRARREGTLAVTPLTRQLADSVLSPPHPWWLAPSVRVWRWLTIGFLPDWLRAAYGFSWSAHDDERFER
YARAIRSLWSRLPALVRTWPEARSAQSLALPPDGMTSVGAPQ

Sequences:

>Translated_282_residues
MMRESRSIVQIVNAERIVVLGWGRAILAQLAHPLVAAGVAEHSSFARDTWSAFRRFRATVNAMRALTFGSPEAARAAAAR
IIRTHDRVRGMLREPSGRFPAGTRYSAHDPDLLVWVHTTTVEATITAYERFVRVLTPEERDRYCREASAMEFWLGIPNGY
LPRSWGEIEEKITRARREGTLAVTPLTRQLADSVLSPPHPWWLAPSVRVWRWLTIGFLPDWLRAAYGFSWSAHDDERFER
YARAIRSLWSRLPALVRTWPEARSAQSLALPPDGMTSVGAPQ
>Mature_282_residues
MMRESRSIVQIVNAERIVVLGWGRAILAQLAHPLVAAGVAEHSSFARDTWSAFRRFRATVNAMRALTFGSPEAARAAAAR
IIRTHDRVRGMLREPSGRFPAGTRYSAHDPDLLVWVHTTTVEATITAYERFVRVLTPEERDRYCREASAMEFWLGIPNGY
LPRSWGEIEEKITRARREGTLAVTPLTRQLADSVLSPPHPWWLAPSVRVWRWLTIGFLPDWLRAAYGFSWSAHDDERFER
YARAIRSLWSRLPALVRTWPEARSAQSLALPPDGMTSVGAPQ

Specific function: Unknown

COG id: COG3662

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32026; Mature: 32026

Theoretical pI: Translated: 11.19; Mature: 11.19

Prosite motif: PS00237 G_PROTEIN_RECEP_F1_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMRESRSIVQIVNAERIVVLGWGRAILAQLAHPLVAAGVAEHSSFARDTWSAFRRFRATV
CCCCHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NAMRALTFGSPEAARAAAARIIRTHDRVRGMLREPSGRFPAGTRYSAHDPDLLVWVHTTT
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEECH
VEATITAYERFVRVLTPEERDRYCREASAMEFWLGIPNGYLPRSWGEIEEKITRARREGT
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHEEECCCCCCCCCHHHHHHHHHHHHHCCC
LAVTPLTRQLADSVLSPPHPWWLAPSVRVWRWLTIGFLPDWLRAAYGFSWSAHDDERFER
EEECHHHHHHHHHHCCCCCCCEECCCHHHHHHHHHHCCHHHHHHHHCCCCCCCCHHHHHH
YARAIRSLWSRLPALVRTWPEARSAQSLALPPDGMTSVGAPQ
HHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MMRESRSIVQIVNAERIVVLGWGRAILAQLAHPLVAAGVAEHSSFARDTWSAFRRFRATV
CCCCHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NAMRALTFGSPEAARAAAARIIRTHDRVRGMLREPSGRFPAGTRYSAHDPDLLVWVHTTT
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEECH
VEATITAYERFVRVLTPEERDRYCREASAMEFWLGIPNGYLPRSWGEIEEKITRARREGT
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHEEECCCCCCCCCHHHHHHHHHHHHHCCC
LAVTPLTRQLADSVLSPPHPWWLAPSVRVWRWLTIGFLPDWLRAAYGFSWSAHDDERFER
EEECHHHHHHHHHHCCCCCCCEECCCHHHHHHHHHHCCHHHHHHHHCCCCCCCCHHHHHH
YARAIRSLWSRLPALVRTWPEARSAQSLALPPDGMTSVGAPQ
HHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA