| Definition | Thermomicrobium roseum DSM 5159 plasmid unnamed, complete sequence. |
|---|---|
| Accession | NC_011961 |
| Length | 917,738 |
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The map label for this gene is 221635725
Identifier: 221635725
GI number: 221635725
Start: 305003
End: 305797
Strand: Reverse
Name: 221635725
Synonym: trd_A0319
Alternate gene names: NA
Gene position: 305797-305003 (Counterclockwise)
Preceding gene: 221635726
Following gene: 221635724
Centisome position: 33.32
GC content: 66.29
Gene sequence:
>795_bases ATGGCGAGTCAGAGCGACGTGCTCTTCGCTCAGCTGCTGCGCGAGTTCGGGCGACCAGTGCCGGAGGATCCCGCTCGGCC TTGCTTGCTGCGAGCGCTCAGAGAACGTCAGTGGCTCGTGCCCGGAGCAAGCGTGCTTCTTCTCCTCCCTTCGCCGGAAC TCGTTGCAGCCGTTGCGGATCACGGTGCACATGTCACCGTGGTGGAGCCGCTCGAACCCCTGCTCGAGCGAGCACGCCGG CGGATCGATGTCCCGAAGACGCCGATTCACTGGATTCGACGCGATCCTCAGCGCCTCCCCTTCCGCCGCGCTTTCGATCT CGTGCTCGCCTCGGGTCTTGTCCTCGGAACGAGCGGTAACCAGCAGGCCGACGAAGAAGTGCTGCGTCAACTCGCGCTGG CTCTTCGGCCCGGAGGGACGCTGCTCCTCGACCTGCCCAATCGCGAACTGCTCGTCCGCGACTTCGTCGAACGGATCTGG GGCGAGATCGACGGTTTGCGCGTTCTGGTCCGCCAGCACTGGGACCTGCCCGAAGGCACCGTGCAGGTCGAGTGGCATGT ACTCTGGCCCTCCGGGGCGAGCGAGCGCTGTGCACGCACGCTGCGTCTCTACGCCGCGAGCGAGCTCGCAACGCTGGTAC GCCGGAGTGGGTTCGTCGCCCTCGAATTCTGGGGCGACGATGACGCCACACCGTACCGACTCTGGTCATCGCGGCTGTTG CTCGTCGCTCGCACGGCCAGCGAGCCATCCCAGCCCCTGGTGGTCGGGAGCGATTCGGAGAGTTCGTCCGCATGA
Upstream 100 bases:
>100_bases GCGACCAGGTCAGGATCGTGGTCAATCGCCAAGGCCGCGAGCAGACGTTCACGGTGACCCTCGGGAGCGCCCCGGTCATC CAGTGAGGGAGGCGATCGCG
Downstream 100 bases:
>100_bases TGCGAGAGTCGCGGTCGATCGTCCAGATCGTCAACGCCGAACGGATCGTCGTCCTGGGGTGGGGTCGAGCGATCCTCGCC CAACTCGCTCATCCTCTCGT
Product: methyltransferase, putative
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 264; Mature: 263
Protein sequence:
>264_residues MASQSDVLFAQLLREFGRPVPEDPARPCLLRALRERQWLVPGASVLLLLPSPELVAAVADHGAHVTVVEPLEPLLERARR RIDVPKTPIHWIRRDPQRLPFRRAFDLVLASGLVLGTSGNQQADEEVLRQLALALRPGGTLLLDLPNRELLVRDFVERIW GEIDGLRVLVRQHWDLPEGTVQVEWHVLWPSGASERCARTLRLYAASELATLVRRSGFVALEFWGDDDATPYRLWSSRLL LVARTASEPSQPLVVGSDSESSSA
Sequences:
>Translated_264_residues MASQSDVLFAQLLREFGRPVPEDPARPCLLRALRERQWLVPGASVLLLLPSPELVAAVADHGAHVTVVEPLEPLLERARR RIDVPKTPIHWIRRDPQRLPFRRAFDLVLASGLVLGTSGNQQADEEVLRQLALALRPGGTLLLDLPNRELLVRDFVERIW GEIDGLRVLVRQHWDLPEGTVQVEWHVLWPSGASERCARTLRLYAASELATLVRRSGFVALEFWGDDDATPYRLWSSRLL LVARTASEPSQPLVVGSDSESSSA >Mature_263_residues ASQSDVLFAQLLREFGRPVPEDPARPCLLRALRERQWLVPGASVLLLLPSPELVAAVADHGAHVTVVEPLEPLLERARRR IDVPKTPIHWIRRDPQRLPFRRAFDLVLASGLVLGTSGNQQADEEVLRQLALALRPGGTLLLDLPNRELLVRDFVERIWG EIDGLRVLVRQHWDLPEGTVQVEWHVLWPSGASERCARTLRLYAASELATLVRRSGFVALEFWGDDDATPYRLWSSRLLL VARTASEPSQPLVVGSDSESSSA
Specific function: Unknown
COG id: COG0500
COG function: function code QR; SAM-dependent methyltransferases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29553; Mature: 29422
Theoretical pI: Translated: 6.37; Mature: 6.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASQSDVLFAQLLREFGRPVPEDPARPCLLRALRERQWLVPGASVLLLLPSPELVAAVAD CCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCEEEEEECCCHHHHHHHC HGAHVTVVEPLEPLLERARRRIDVPKTPIHWIRRDPQRLPFRRAFDLVLASGLVLGTSGN CCCEEEEECHHHHHHHHHHHHCCCCCCCHHHHHCCHHHCCHHHHHHHHHHCCEEEECCCC QQADEEVLRQLALALRPGGTLLLDLPNRELLVRDFVERIWGEIDGLRVLVRQHWDLPEGT CHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCE VQVEWHVLWPSGASERCARTLRLYAASELATLVRRSGFVALEFWGDDDATPYRLWSSRLL EEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHCCEEE LVARTASEPSQPLVVGSDSESSSA EEEECCCCCCCCEEEECCCCCCCC >Mature Secondary Structure ASQSDVLFAQLLREFGRPVPEDPARPCLLRALRERQWLVPGASVLLLLPSPELVAAVAD CCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCEEEEEECCCHHHHHHHC HGAHVTVVEPLEPLLERARRRIDVPKTPIHWIRRDPQRLPFRRAFDLVLASGLVLGTSGN CCCEEEEECHHHHHHHHHHHHCCCCCCCHHHHHCCHHHCCHHHHHHHHHHCCEEEECCCC QQADEEVLRQLALALRPGGTLLLDLPNRELLVRDFVERIWGEIDGLRVLVRQHWDLPEGT CHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCE VQVEWHVLWPSGASERCARTLRLYAASELATLVRRSGFVALEFWGDDDATPYRLWSSRLL EEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHCCEEE LVARTASEPSQPLVVGSDSESSSA EEEECCCCCCCCEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA