Definition Thermomicrobium roseum DSM 5159 plasmid unnamed, complete sequence.
Accession NC_011961
Length 917,738

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The map label for this gene is 221635703

Identifier: 221635703

GI number: 221635703

Start: 283470

End: 283781

Strand: Reverse

Name: 221635703

Synonym: trd_A0296

Alternate gene names: NA

Gene position: 283781-283470 (Counterclockwise)

Preceding gene: 221635706

Following gene: 221635699

Centisome position: 30.92

GC content: 67.63

Gene sequence:

>312_bases
GTGCCCGGAGTCACCGTCACCCGCCGCCATCCACCGCGAATCGTCGTGGCTCCAGGGACGAACCGACCGAACGGAGACGC
CACCCGTGTTCAGGAGGTTACTCCCCTCCTGACCAGCGTGATCGAGAGCGAGAGACGATCGCGGGCAGAAGACCGATCGA
GACGCCGAGACAGCGGCGCGCAAAGAGCCTTCGGACACCCACGGGCATGGAGCCGGGGAACACACCGTGTCGCGACAGCG
CCGTTCCTCGTCCAAGCGATCGATCAGCCGGAGCCGCGTACCGGACAGCCGTGCCTGTCCGACCGGCCCTAG

Upstream 100 bases:

>100_bases
GGATCCACCCGTCGAGGTCGGCCGGGCTGCTTCGAGAAGACTGCGATCCGTCCCTCTCTCCTGGCGGGTCATGACCGATC
GCAGCACTGAGCAGAGTACC

Downstream 100 bases:

>100_bases
TCACTCCTCGCGGGGTGCACGGAGCTGGCTGCCTCCAGCGGCTCGTGCCTCACCCCGCGCAGGAGTCGAAGGGGCCCACT
GCGCACGGATGAGGAGGCTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 103; Mature: 102

Protein sequence:

>103_residues
MPGVTVTRRHPPRIVVAPGTNRPNGDATRVQEVTPLLTSVIESERRSRAEDRSRRRDSGAQRAFGHPRAWSRGTHRVATA
PFLVQAIDQPEPRTGQPCLSDRP

Sequences:

>Translated_103_residues
MPGVTVTRRHPPRIVVAPGTNRPNGDATRVQEVTPLLTSVIESERRSRAEDRSRRRDSGAQRAFGHPRAWSRGTHRVATA
PFLVQAIDQPEPRTGQPCLSDRP
>Mature_102_residues
PGVTVTRRHPPRIVVAPGTNRPNGDATRVQEVTPLLTSVIESERRSRAEDRSRRRDSGAQRAFGHPRAWSRGTHRVATAP
FLVQAIDQPEPRTGQPCLSDRP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11454; Mature: 11323

Theoretical pI: Translated: 12.20; Mature: 12.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPGVTVTRRHPPRIVVAPGTNRPNGDATRVQEVTPLLTSVIESERRSRAEDRSRRRDSGA
CCCCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
QRAFGHPRAWSRGTHRVATAPFLVQAIDQPEPRTGQPCLSDRP
HHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
PGVTVTRRHPPRIVVAPGTNRPNGDATRVQEVTPLLTSVIESERRSRAEDRSRRRDSGA
CCCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
QRAFGHPRAWSRGTHRVATAPFLVQAIDQPEPRTGQPCLSDRP
HHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA