Definition Thermomicrobium roseum DSM 5159 plasmid unnamed, complete sequence.
Accession NC_011961
Length 917,738

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The map label for this gene is 221635706

Identifier: 221635706

GI number: 221635706

Start: 285418

End: 285636

Strand: Reverse

Name: 221635706

Synonym: trd_A0300

Alternate gene names: NA

Gene position: 285636-285418 (Counterclockwise)

Preceding gene: 221635707

Following gene: 221635703

Centisome position: 31.12

GC content: 70.78

Gene sequence:

>219_bases
GTGCTCGACCTCGCGACCGTGTTAGTGGCTCTCGGTGCGTTTCTCCTCGGCCCGCACTGGCTGCTCGGCGCCATCCGCCA
GGCTGACCAGTGCGAGGCCGCCGGTGATCCCCTGGGTGCCTTGGCCTGGACGCTGGCTGCGGTGCTGGGCGCCTATGCGG
TCGCCCTGGCCTTCCTCGTCCTGGTCATCCAGGCCGCCCGGCACAGCTTCGCTGCGTGA

Upstream 100 bases:

>100_bases
GCCATCCTTTTCGTCGCGCTGGCAGCGCTCATCATCGTGCTCGCTCTCGTCCTCGCACGCCAGCGCGCTCCCAGCTGACC
AGCGCATCAGGTATCCAACC

Downstream 100 bases:

>100_bases
GTCCCGGCCTAGACGACCAAGCCCAGGGCATGACGCAAGAAGTAGATGACGAACGCCGCGCTCACCACATAGAGGACCGG
GTACACCTCGCGGAACTTGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 72; Mature: 72

Protein sequence:

>72_residues
MLDLATVLVALGAFLLGPHWLLGAIRQADQCEAAGDPLGALAWTLAAVLGAYAVALAFLVLVIQAARHSFAA

Sequences:

>Translated_72_residues
MLDLATVLVALGAFLLGPHWLLGAIRQADQCEAAGDPLGALAWTLAAVLGAYAVALAFLVLVIQAARHSFAA
>Mature_72_residues
MLDLATVLVALGAFLLGPHWLLGAIRQADQCEAAGDPLGALAWTLAAVLGAYAVALAFLVLVIQAARHSFAA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 7370; Mature: 7370

Theoretical pI: Translated: 5.41; Mature: 5.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLDLATVLVALGAFLLGPHWLLGAIRQADQCEAAGDPLGALAWTLAAVLGAYAVALAFLV
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
LVIQAARHSFAA
HHHHHHHHHCCC
>Mature Secondary Structure
MLDLATVLVALGAFLLGPHWLLGAIRQADQCEAAGDPLGALAWTLAAVLGAYAVALAFLV
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
LVIQAARHSFAA
HHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA