| Definition | Thermomicrobium roseum DSM 5159 plasmid unnamed, complete sequence. |
|---|---|
| Accession | NC_011961 |
| Length | 917,738 |
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The map label for this gene is 221635691
Identifier: 221635691
GI number: 221635691
Start: 273596
End: 273985
Strand: Reverse
Name: 221635691
Synonym: trd_A0285
Alternate gene names: NA
Gene position: 273985-273596 (Counterclockwise)
Preceding gene: 221635692
Following gene: 221635690
Centisome position: 29.85
GC content: 57.44
Gene sequence:
>390_bases ATGTACCTTCGCGCCAATGACGGGAGCGGATGGTTTTGGGATAGCGACCCAGGCCGCAAACTCCTCATTCCCGGATACAT AAATTGGTTCCACCACATCCGCGTCTATGCCCCAGCATCGACCGACTACTTCTACTCGACTGCCTGGGGACGGTATGTCC TGGCCACGACACACATCGACCGAAACGAGGGGACATCTCAGGAACAATTCGGTTGGAGCGAAACTGCCGAGGAGTACTTT GCGGCACTCTTCCGGAATCAGGGATATTCCGTCACCGAGGACACCTTCTGGATGGCGAACAACGACTCCTGGCCGAGCGG TCGCTGGGGCGAAGGGAACCGCAACTTCTACCTCAGCAATGGCTACGCGACGATCGTCGTCCTACCCTGA
Upstream 100 bases:
>100_bases ATGCTCCAATAACGTCGACTGGCCAGTCACCTTGGTATTCCGAACGAACGCGTCCGTGAACCGAGTCAAAAGTATCGTGG GCGGCGTTGGAGGATCCTCC
Downstream 100 bases:
>100_bases GAGGGTGCTCATGCCGTCGGAACGCGCCGGTGCCGTGCCCAGCCTACCGCCACGCTCCCCCATCCCCGAGTCCCTGCGCA AGGGTGTCGCACTCGGGCTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 129; Mature: 129
Protein sequence:
>129_residues MYLRANDGSGWFWDSDPGRKLLIPGYINWFHHIRVYAPASTDYFYSTAWGRYVLATTHIDRNEGTSQEQFGWSETAEEYF AALFRNQGYSVTEDTFWMANNDSWPSGRWGEGNRNFYLSNGYATIVVLP
Sequences:
>Translated_129_residues MYLRANDGSGWFWDSDPGRKLLIPGYINWFHHIRVYAPASTDYFYSTAWGRYVLATTHIDRNEGTSQEQFGWSETAEEYF AALFRNQGYSVTEDTFWMANNDSWPSGRWGEGNRNFYLSNGYATIVVLP >Mature_129_residues MYLRANDGSGWFWDSDPGRKLLIPGYINWFHHIRVYAPASTDYFYSTAWGRYVLATTHIDRNEGTSQEQFGWSETAEEYF AALFRNQGYSVTEDTFWMANNDSWPSGRWGEGNRNFYLSNGYATIVVLP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15004; Mature: 15004
Theoretical pI: Translated: 4.79; Mature: 4.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYLRANDGSGWFWDSDPGRKLLIPGYINWFHHIRVYAPASTDYFYSTAWGRYVLATTHID CEEECCCCCCEEECCCCCCEEEECHHHCCEEEEEEEECCCCCEEEECCCCCEEEEEEEEC RNEGTSQEQFGWSETAEEYFAALFRNQGYSVTEDTFWMANNDSWPSGRWGEGNRNFYLSN CCCCCCHHHCCCCHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCCCCCEEEEEC GYATIVVLP CEEEEEEEC >Mature Secondary Structure MYLRANDGSGWFWDSDPGRKLLIPGYINWFHHIRVYAPASTDYFYSTAWGRYVLATTHID CEEECCCCCCEEECCCCCCEEEECHHHCCEEEEEEEECCCCCEEEECCCCCEEEEEEEEC RNEGTSQEQFGWSETAEEYFAALFRNQGYSVTEDTFWMANNDSWPSGRWGEGNRNFYLSN CCCCCCHHHCCCCHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCCCCCEEEEEC GYATIVVLP CEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA