Definition Thermomicrobium roseum DSM 5159 plasmid unnamed, complete sequence.
Accession NC_011961
Length 917,738

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The map label for this gene is 221635690

Identifier: 221635690

GI number: 221635690

Start: 273076

End: 273591

Strand: Reverse

Name: 221635690

Synonym: trd_A0284

Alternate gene names: NA

Gene position: 273591-273076 (Counterclockwise)

Preceding gene: 221635691

Following gene: 221635689

Centisome position: 29.81

GC content: 67.44

Gene sequence:

>516_bases
GTGCTCATGCCGTCGGAACGCGCCGGTGCCGTGCCCAGCCTACCGCCACGCTCCCCCATCCCCGAGTCCCTGCGCAAGGG
TGTCGCACTCGGGCTCGCGCTCCTGGGAGCACTGTTCGGCGCCGCGACGCTCTTTTATCTCTGGCGATCCTTCCGCGAAG
ACTACCCGGAACTGCGGTTCGACCTCCGTGTCCTCGCCGCCCTGCTCTTCGGTTACGGCTCGCTCTTCGCGGTCTCGGCG
TGGGCGCTCTGGCGCGGCCGTGTCCGGCTCTGGCTCCCGCTGGCAGCACTGGTGGGGTTCTTGCTCCCCTTCCTCTCCTT
CACGCTCGACAGACTGTACTACGCGGTACGCACCGGCGAGTTCCGTCCGGAGCGTCTTCTGGACGCGCTCCGCCTGTACT
ACGGCCCGCCCTTCACCGCCATCCACGCGGTGCTCTACGGCTGTCTCGTCCTCGCGCTCTTCACTTTCTGGGTGTACCGC
AGCCAGCACCAGGTTCCAGGCAACGAGGACCGTTGA

Upstream 100 bases:

>100_bases
GCGAACAACGACTCCTGGCCGAGCGGTCGCTGGGGCGAAGGGAACCGCAACTTCTACCTCAGCAATGGCTACGCGACGAT
CGTCGTCCTACCCTGAGAGG

Downstream 100 bases:

>100_bases
GCGATGACCGGCGGGAGGAGCACCGTGGCAGACCGGTTGACGACCGTGTTCCTCCCCCTGCTCCTCGCCGCGGTGCTCGT
GCCCCTCGTCTCCTTCACCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 171; Mature: 171

Protein sequence:

>171_residues
MLMPSERAGAVPSLPPRSPIPESLRKGVALGLALLGALFGAATLFYLWRSFREDYPELRFDLRVLAALLFGYGSLFAVSA
WALWRGRVRLWLPLAALVGFLLPFLSFTLDRLYYAVRTGEFRPERLLDALRLYYGPPFTAIHAVLYGCLVLALFTFWVYR
SQHQVPGNEDR

Sequences:

>Translated_171_residues
MLMPSERAGAVPSLPPRSPIPESLRKGVALGLALLGALFGAATLFYLWRSFREDYPELRFDLRVLAALLFGYGSLFAVSA
WALWRGRVRLWLPLAALVGFLLPFLSFTLDRLYYAVRTGEFRPERLLDALRLYYGPPFTAIHAVLYGCLVLALFTFWVYR
SQHQVPGNEDR
>Mature_171_residues
MLMPSERAGAVPSLPPRSPIPESLRKGVALGLALLGALFGAATLFYLWRSFREDYPELRFDLRVLAALLFGYGSLFAVSA
WALWRGRVRLWLPLAALVGFLLPFLSFTLDRLYYAVRTGEFRPERLLDALRLYYGPPFTAIHAVLYGCLVLALFTFWVYR
SQHQVPGNEDR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19412; Mature: 19412

Theoretical pI: Translated: 9.98; Mature: 9.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLMPSERAGAVPSLPPRSPIPESLRKGVALGLALLGALFGAATLFYLWRSFREDYPELRF
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DLRVLAALLFGYGSLFAVSAWALWRGRVRLWLPLAALVGFLLPFLSFTLDRLYYAVRTGE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
FRPERLLDALRLYYGPPFTAIHAVLYGCLVLALFTFWVYRSQHQVPGNEDR
CCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MLMPSERAGAVPSLPPRSPIPESLRKGVALGLALLGALFGAATLFYLWRSFREDYPELRF
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DLRVLAALLFGYGSLFAVSAWALWRGRVRLWLPLAALVGFLLPFLSFTLDRLYYAVRTGE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
FRPERLLDALRLYYGPPFTAIHAVLYGCLVLALFTFWVYRSQHQVPGNEDR
CCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA