Definition Thermomicrobium roseum DSM 5159 plasmid unnamed, complete sequence.
Accession NC_011961
Length 917,738

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The map label for this gene is 221635679

Identifier: 221635679

GI number: 221635679

Start: 256639

End: 257022

Strand: Reverse

Name: 221635679

Synonym: trd_A0273

Alternate gene names: NA

Gene position: 257022-256639 (Counterclockwise)

Preceding gene: 221635680

Following gene: 221635678

Centisome position: 28.01

GC content: 67.45

Gene sequence:

>384_bases
ATGACACCGATCGAGGTCACGCCGCAGCCACCGGACATCGATCAGCGCGCGCTCCGCGTCTTCCTCAAAGCCATCGAGCT
CGTCGGCGGGCCACGCCAGCTGGTCGAGTTGCGACGGCTCACCTGGTTACCCAGTCTGATGGAAGCAGCCTACGCGGTAG
TCCTCGCCGAAGAGCATCACTGGCCAGCCGAAGAGATCGCCCGGTTCCTCGGTGTCTCCAGCGCGGCAGCGCGCCACCTC
CTGCGCGCTCCCGAGGCAGCCGTGCTGGAGCGCCTCCGCGGCGAGGAACCCAGCGAGCACAACGTCCACATCGCCGGTGG
ACTGGCCAAACTCGCCCTGGAGGCTCTCCAGCGCGAGGAGGAAAGCGGAACGCACCAGTCGTGA

Upstream 100 bases:

>100_bases
ACCTACTCGAGATCACCCCAGAAGGACTGGTGCGGATCGGACCGCGGCTGAGCGACCTCGCACGCGGTGCAGCTGTCAGC
ACAGGAGAGGAGGAGGTGGA

Downstream 100 bases:

>100_bases
TCGAGCCAGCTCGGGAACGGGCAGCACAGCGGCGACGCCTGCGGGGCGGCCCCGCTGATCACCCTTCCCATCGCCTCGCT
TCCTGACGAGTGGGTTGGCC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 127; Mature: 126

Protein sequence:

>127_residues
MTPIEVTPQPPDIDQRALRVFLKAIELVGGPRQLVELRRLTWLPSLMEAAYAVVLAEEHHWPAEEIARFLGVSSAAARHL
LRAPEAAVLERLRGEEPSEHNVHIAGGLAKLALEALQREEESGTHQS

Sequences:

>Translated_127_residues
MTPIEVTPQPPDIDQRALRVFLKAIELVGGPRQLVELRRLTWLPSLMEAAYAVVLAEEHHWPAEEIARFLGVSSAAARHL
LRAPEAAVLERLRGEEPSEHNVHIAGGLAKLALEALQREEESGTHQS
>Mature_126_residues
TPIEVTPQPPDIDQRALRVFLKAIELVGGPRQLVELRRLTWLPSLMEAAYAVVLAEEHHWPAEEIARFLGVSSAAARHLL
RAPEAAVLERLRGEEPSEHNVHIAGGLAKLALEALQREEESGTHQS

Specific function: Unknown

COG id: COG1318

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14062; Mature: 13931

Theoretical pI: Translated: 5.56; Mature: 5.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPIEVTPQPPDIDQRALRVFLKAIELVGGPRQLVELRRLTWLPSLMEAAYAVVLAEEHH
CCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
WPAEEIARFLGVSSAAARHLLRAPEAAVLERLRGEEPSEHNVHIAGGLAKLALEALQREE
CCHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHCCCCCCCCCEEEHHHHHHHHHHHHHHHH
ESGTHQS
HCCCCCC
>Mature Secondary Structure 
TPIEVTPQPPDIDQRALRVFLKAIELVGGPRQLVELRRLTWLPSLMEAAYAVVLAEEHH
CCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
WPAEEIARFLGVSSAAARHLLRAPEAAVLERLRGEEPSEHNVHIAGGLAKLALEALQREE
CCHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHCCCCCCCCCEEEHHHHHHHHHHHHHHHH
ESGTHQS
HCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA