| Definition | Thermomicrobium roseum DSM 5159 plasmid unnamed, complete sequence. |
|---|---|
| Accession | NC_011961 |
| Length | 917,738 |
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The map label for this gene is 221635678
Identifier: 221635678
GI number: 221635678
Start: 255997
End: 256398
Strand: Reverse
Name: 221635678
Synonym: trd_A0272
Alternate gene names: NA
Gene position: 256398-255997 (Counterclockwise)
Preceding gene: 221635679
Following gene: 221635677
Centisome position: 27.94
GC content: 66.67
Gene sequence:
>402_bases GTGCGGATGACGAGCGAAATCGAAACCTGGGACGGCACACCACCGGACGAGGATCTGGGCTGGCTGACCGAGCCACCCTT GTACTGGATCGTCGAGCATAGCGAGCCGCTCCCGCCGATTCCCGGCCTGACCTATCTGGCGACCAATCGTTACGCCGATT GCGCCGCCGATCAGACACTCGTCGCCACCCCCGACGAGCCGGAGCTCATCGAGCTCCTCCGCGGCGCGCCCGGCGTCCAG GCGATCGAGCCCGGTTACTTCCGGTACTTCTTCCAGGGCGACTCGGTGATCGCCGTGGTCAACAGCGCAGCCATCACCTG GTTCGATTCAGTCGACGAGGCGCTGCGCTGGGACCCCTTCGCCGAGTCCGGCAGCTCGTTCCCGCCCGGCCCCACCTGTT GA
Upstream 100 bases:
>100_bases AGTCCTGGGTACTGCGTCCGATCCTCCCTCTTTGCAGGGAGCGACCAGAGTGCTATGCTCAGGCAGACTAGGCCCACGCG GCGATCGACGCGACGGGACG
Downstream 100 bases:
>100_bases GACGATGACTGCCCCGAACGCGCTGGCAGTCTTCACGGTGACGCTCCTCTTCGCCGGTGAGCGGTGTCTGCTCCTCCACC GCCATACCCAGCGCCATCGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 133; Mature: 133
Protein sequence:
>133_residues MRMTSEIETWDGTPPDEDLGWLTEPPLYWIVEHSEPLPPIPGLTYLATNRYADCAADQTLVATPDEPELIELLRGAPGVQ AIEPGYFRYFFQGDSVIAVVNSAAITWFDSVDEALRWDPFAESGSSFPPGPTC
Sequences:
>Translated_133_residues MRMTSEIETWDGTPPDEDLGWLTEPPLYWIVEHSEPLPPIPGLTYLATNRYADCAADQTLVATPDEPELIELLRGAPGVQ AIEPGYFRYFFQGDSVIAVVNSAAITWFDSVDEALRWDPFAESGSSFPPGPTC >Mature_133_residues MRMTSEIETWDGTPPDEDLGWLTEPPLYWIVEHSEPLPPIPGLTYLATNRYADCAADQTLVATPDEPELIELLRGAPGVQ AIEPGYFRYFFQGDSVIAVVNSAAITWFDSVDEALRWDPFAESGSSFPPGPTC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14706; Mature: 14706
Theoretical pI: Translated: 3.63; Mature: 3.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRMTSEIETWDGTPPDEDLGWLTEPPLYWIVEHSEPLPPIPGLTYLATNRYADCAADQTL CCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCEEEEECCCCCCCCCCCEE VATPDEPELIELLRGAPGVQAIEPGYFRYFFQGDSVIAVVNSAAITWFDSVDEALRWDPF EECCCCHHHHHHHCCCCCCCEECCCEEEEEEECCCEEEEECCCEEEEHHHHHHHHCCCCC AESGSSFPPGPTC CCCCCCCCCCCCC >Mature Secondary Structure MRMTSEIETWDGTPPDEDLGWLTEPPLYWIVEHSEPLPPIPGLTYLATNRYADCAADQTL CCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCEEEEECCCCCCCCCCCEE VATPDEPELIELLRGAPGVQAIEPGYFRYFFQGDSVIAVVNSAAITWFDSVDEALRWDPF EECCCCHHHHHHHCCCCCCCEECCCEEEEEEECCCEEEEECCCEEEEHHHHHHHHCCCCC AESGSSFPPGPTC CCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA