Definition Thermomicrobium roseum DSM 5159 plasmid unnamed, complete sequence.
Accession NC_011961
Length 917,738

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The map label for this gene is 221635677

Identifier: 221635677

GI number: 221635677

Start: 255477

End: 255992

Strand: Reverse

Name: 221635677

Synonym: trd_A0271

Alternate gene names: NA

Gene position: 255992-255477 (Counterclockwise)

Preceding gene: 221635678

Following gene: 221635671

Centisome position: 27.89

GC content: 69.19

Gene sequence:

>516_bases
ATGACTGCCCCGAACGCGCTGGCAGTCTTCACGGTGACGCTCCTCTTCGCCGGTGAGCGGTGTCTGCTCCTCCACCGCCA
TACCCAGCGCCATCGTTTCCCCGATCTCTGGACCGGTCTCGGGGGACGCGTCGAGCCGACCGAGCTGGCTGACTTGGCCA
GCGCCGCTCGCCGAGAACTCGCTGAAGAGACCGGAATACCGCTCCACGACGTACCCTCGCTCGTCCTGCGCCGCGTCCTC
CTGCAGCACCGTCCGGCGAGCGCCGAACTGGAACTGCTCCTCTACTTCACCGGCGAACTCGCCAGCCCCCTGACAATCTC
GGCGAGTCGGGAGGGGACGCTCCACTGGGTCGCCCCGACCGATCTTCCCGCGCTCCCGCTCGTCGACAACGCGCGCCTGG
TCTTGCCGCACCTCGTCGCCGATCGCGCCCGCGATCCAGCCGCAAGCGAGCCGGTCAAGTTGGGCATCGCCCGCTGCGAC
GAGCAGGGGCGCGTTGTCGCCATCGCCTGGGCCTGA

Upstream 100 bases:

>100_bases
GCAGCCATCACCTGGTTCGATTCAGTCGACGAGGCGCTGCGCTGGGACCCCTTCGCCGAGTCCGGCAGCTCGTTCCCGCC
CGGCCCCACCTGTTGAGACG

Downstream 100 bases:

>100_bases
TCGCTCGGTCCTCACCAGCCGATCTCCAGTACCCACTGTGCGGCATCGCGCCCGCTCCGGCGGGCACCCAGACCTGCACG
ACCTCTTGCCGGGCCGAACG

Product: nudix hydrolase, putative

Products: NA

Alternate protein names: Nudix Hydrolase

Number of amino acids: Translated: 171; Mature: 170

Protein sequence:

>171_residues
MTAPNALAVFTVTLLFAGERCLLLHRHTQRHRFPDLWTGLGGRVEPTELADLASAARRELAEETGIPLHDVPSLVLRRVL
LQHRPASAELELLLYFTGELASPLTISASREGTLHWVAPTDLPALPLVDNARLVLPHLVADRARDPAASEPVKLGIARCD
EQGRVVAIAWA

Sequences:

>Translated_171_residues
MTAPNALAVFTVTLLFAGERCLLLHRHTQRHRFPDLWTGLGGRVEPTELADLASAARRELAEETGIPLHDVPSLVLRRVL
LQHRPASAELELLLYFTGELASPLTISASREGTLHWVAPTDLPALPLVDNARLVLPHLVADRARDPAASEPVKLGIARCD
EQGRVVAIAWA
>Mature_170_residues
TAPNALAVFTVTLLFAGERCLLLHRHTQRHRFPDLWTGLGGRVEPTELADLASAARRELAEETGIPLHDVPSLVLRRVLL
QHRPASAELELLLYFTGELASPLTISASREGTLHWVAPTDLPALPLVDNARLVLPHLVADRARDPAASEPVKLGIARCDE
QGRVVAIAWA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18676; Mature: 18545

Theoretical pI: Translated: 6.63; Mature: 6.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAPNALAVFTVTLLFAGERCLLLHRHTQRHRFPDLWTGLGGRVEPTELADLASAARREL
CCCCHHHHHHHHHHHHCCCEEEEEECHHHHCCCCHHHHCCCCCCCHHHHHHHHHHHHHHH
AEETGIPLHDVPSLVLRRVLLQHRPASAELELLLYFTGELASPLTISASREGTLHWVAPT
HHHCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCEEEECCCCCEEEEECCC
DLPALPLVDNARLVLPHLVADRARDPAASEPVKLGIARCDEQGRVVAIAWA
CCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCEEHHHHCCCCCCEEEEEEC
>Mature Secondary Structure 
TAPNALAVFTVTLLFAGERCLLLHRHTQRHRFPDLWTGLGGRVEPTELADLASAARREL
CCCHHHHHHHHHHHHCCCEEEEEECHHHHCCCCHHHHCCCCCCCHHHHHHHHHHHHHHH
AEETGIPLHDVPSLVLRRVLLQHRPASAELELLLYFTGELASPLTISASREGTLHWVAPT
HHHCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCEEEECCCCCEEEEECCC
DLPALPLVDNARLVLPHLVADRARDPAASEPVKLGIARCDEQGRVVAIAWA
CCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCEEHHHHCCCCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA