| Definition | Thermomicrobium roseum DSM 5159 plasmid unnamed, complete sequence. |
|---|---|
| Accession | NC_011961 |
| Length | 917,738 |
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The map label for this gene is 221635631
Identifier: 221635631
GI number: 221635631
Start: 213722
End: 214555
Strand: Reverse
Name: 221635631
Synonym: trd_A0225
Alternate gene names: NA
Gene position: 214555-213722 (Counterclockwise)
Preceding gene: 221635635
Following gene: 221635630
Centisome position: 23.38
GC content: 68.11
Gene sequence:
>834_bases ATGGACGAGGAGCCGCGCCTGACCGAACCTGCTCCGCCCGACCGACCGCTCGTCTACTCGGGCGAGCCAGCCGGCGACAG TGGCGGCTTTCCCTGGCGGTGGGTCCTGATCGGTTGTGGCGGTGCACTCGTCCTGGCCTGTGTCTGCCTGGTCGCCGCCG TCGGAACCTACGCGTTCCTCACGGTCACCCGCGCGACACCGACGCCCCAGATCGCCATGAGCACGCCCGCTGCTCGGCCA GCCCGCACCGCGACGGTCGGATCCGGCTCGCTCACCCCGGCAACTGCGGTCCAGCCCGCGCCGCGGGGCACGCCGTCCTC CAGCACCGGTCAGTCGAGCGCTGGGCTGCCTGCTGGTTGGCGGTGGTTCGACGACCCCTCCGGCCAGGTGCGCCTAGCGG TTCCCGGTGGCTGGAACTTCTTTTATGAAGAAAAGATCTGTTGCAACGTCACGCTCGTGACGTTCGATCCCGGCCAACTG CCGAGCGGACGGATCGCCTGGGCTCCGCCCGGATCGGGTGCCGCACACGAGGTACCGGCCGGGGAAATGGTCGTCGATCT CTTCATCGTCGCGCCCCCCTACGCCGACCAGCCACCCGACTTCGGTCGCCCGCCCGATGGTGAAGACATCGTCGGCGGGC GCTACCACGCGCAGCTCTACTTCAGCGCCCCCTATACCGACTGGCCCAGCGGGCAGGTCATCACCTATCTCTACCAGGAC GACCGGGGTCGGCAGTGGTGCCTGATCGCCTATTTCGGCACGCCGTTCGAGCAAGATATGGAGCACTTGGCCATGCTCGG CCAGATCGTTGCCAGCATCCAGCACCCGAGCTGA
Upstream 100 bases:
>100_bases GACGCCCTCTCTTCGGTGCGCTGGTTCACGCTCGCACCGGTAGGCTCGCGCAGCAAGAAGCCGACCCGCACGGCAGGAGA ACCCGCTAAGGGGGTGGACG
Downstream 100 bases:
>100_bases GCGAGGAGAGCACGCCATGGAGCGTCGCCGTTCCCCAGTACAGTTGATCGGCTTCGGTTGCCTCGGTCTCCTGCTCCTCG TCCTCGCAGTGGGCGGCGGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 277; Mature: 277
Protein sequence:
>277_residues MDEEPRLTEPAPPDRPLVYSGEPAGDSGGFPWRWVLIGCGGALVLACVCLVAAVGTYAFLTVTRATPTPQIAMSTPAARP ARTATVGSGSLTPATAVQPAPRGTPSSSTGQSSAGLPAGWRWFDDPSGQVRLAVPGGWNFFYEEKICCNVTLVTFDPGQL PSGRIAWAPPGSGAAHEVPAGEMVVDLFIVAPPYADQPPDFGRPPDGEDIVGGRYHAQLYFSAPYTDWPSGQVITYLYQD DRGRQWCLIAYFGTPFEQDMEHLAMLGQIVASIQHPS
Sequences:
>Translated_277_residues MDEEPRLTEPAPPDRPLVYSGEPAGDSGGFPWRWVLIGCGGALVLACVCLVAAVGTYAFLTVTRATPTPQIAMSTPAARP ARTATVGSGSLTPATAVQPAPRGTPSSSTGQSSAGLPAGWRWFDDPSGQVRLAVPGGWNFFYEEKICCNVTLVTFDPGQL PSGRIAWAPPGSGAAHEVPAGEMVVDLFIVAPPYADQPPDFGRPPDGEDIVGGRYHAQLYFSAPYTDWPSGQVITYLYQD DRGRQWCLIAYFGTPFEQDMEHLAMLGQIVASIQHPS >Mature_277_residues MDEEPRLTEPAPPDRPLVYSGEPAGDSGGFPWRWVLIGCGGALVLACVCLVAAVGTYAFLTVTRATPTPQIAMSTPAARP ARTATVGSGSLTPATAVQPAPRGTPSSSTGQSSAGLPAGWRWFDDPSGQVRLAVPGGWNFFYEEKICCNVTLVTFDPGQL PSGRIAWAPPGSGAAHEVPAGEMVVDLFIVAPPYADQPPDFGRPPDGEDIVGGRYHAQLYFSAPYTDWPSGQVITYLYQD DRGRQWCLIAYFGTPFEQDMEHLAMLGQIVASIQHPS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29508; Mature: 29508
Theoretical pI: Translated: 4.43; Mature: 4.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDEEPRLTEPAPPDRPLVYSGEPAGDSGGFPWRWVLIGCGGALVLACVCLVAAVGTYAFL CCCCCCCCCCCCCCCCEEECCCCCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHCCEEEE TVTRATPTPQIAMSTPAARPARTATVGSGSLTPATAVQPAPRGTPSSSTGQSSAGLPAGW EEECCCCCCEEEECCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC RWFDDPSGQVRLAVPGGWNFFYEEKICCNVTLVTFDPGQLPSGRIAWAPPGSGAAHEVPA EECCCCCCCEEEEECCCCCEEECCEEEEEEEEEEECCCCCCCCEEEECCCCCCCCCCCCC GEMVVDLFIVAPPYADQPPDFGRPPDGEDIVGGRYHAQLYFSAPYTDWPSGQVITYLYQD CCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCEEEEEEEC DRGRQWCLIAYFGTPFEQDMEHLAMLGQIVASIQHPS CCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MDEEPRLTEPAPPDRPLVYSGEPAGDSGGFPWRWVLIGCGGALVLACVCLVAAVGTYAFL CCCCCCCCCCCCCCCCEEECCCCCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHCCEEEE TVTRATPTPQIAMSTPAARPARTATVGSGSLTPATAVQPAPRGTPSSSTGQSSAGLPAGW EEECCCCCCEEEECCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC RWFDDPSGQVRLAVPGGWNFFYEEKICCNVTLVTFDPGQLPSGRIAWAPPGSGAAHEVPA EECCCCCCCEEEEECCCCCEEECCEEEEEEEEEEECCCCCCCCEEEECCCCCCCCCCCCC GEMVVDLFIVAPPYADQPPDFGRPPDGEDIVGGRYHAQLYFSAPYTDWPSGQVITYLYQD CCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCEEEEEEEC DRGRQWCLIAYFGTPFEQDMEHLAMLGQIVASIQHPS CCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA