| Definition | Thermomicrobium roseum DSM 5159 plasmid unnamed, complete sequence. |
|---|---|
| Accession | NC_011961 |
| Length | 917,738 |
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The map label for this gene is nosZ [H]
Identifier: 221635600
GI number: 221635600
Start: 176069
End: 178183
Strand: Reverse
Name: nosZ [H]
Synonym: trd_A0194
Alternate gene names: 221635600
Gene position: 178183-176069 (Counterclockwise)
Preceding gene: 221635601
Following gene: 221635599
Centisome position: 19.42
GC content: 62.17
Gene sequence:
>2115_bases GTGTTCGCTCCGTCGTTCCCCGACGAGACTGAAAACGGGAACGAGGAGCGGCAAGGACCGCACCGGATGAGTCGAGGAGG ATCGACGATGGCTGAACGACAGGATCGACCACCGTCCTCGATCGGTCAGCGTAAGGTGAGTCGGCGCGGCCTTCTGGGAA CCGCGGCTGGTCTTTCGGCGGGTGCGTTGCTGGCCAGTTGCAGTGTCTTCCAGCGCAAAGAAGAAACACCCAAGCTGGGG GCGAGCGCCGACGAGATCATCAAGGCACGGCAGCTGACACCGGAGGACGTGACGGCCGCGCTCATGACGTATGTTCCCTC CGGGAAGTACGACGAGTACCTGATGTTCTCCTCCACCGGCCACGGTGGCCAGGTGCTCGTACACGGTCTCCCCTCGATGC GGCTCCTCAAGGTGATCGCGGTCTTCACCCCCGAGCCCTGGCAGGGCTATGGCTACGGCGGGTACACGAATGAGGTCCTC GAGGGCGGGTACTTCCACGGTAAACCGATTCTCTGGGGCGATACCCATCATCCAGCCTTGAGCGAGACGAACGGGGAGTA CGACGGCGAGTTCCTGTTCATCAACGACAAGGCGAACGGTCGCGTCGCTGTCATCGACCTGCGCGATTTCGAGACGAAGC AGATCGTCAAGAACCCGCTTCTGGTGAACGAGCACGGCGGCTGCTTCGTCACTCCGAACACCGAGTACGTGCTGGAGGCC GACCAGTACTCGGTGCCGCTGGGGGGCGTCTACGCGCCGATCACCGAGTACAAGGAAAAGTATCGCGGCGTCCTCACGTT CTGGAAGTTCGATCGGCAGAAGGGCCGCATCGTCCCCGAGCAGTCGTTCGCGATCGAGACGCCGCCCTACTGGCATGACC TAGCCGATGCCGGCAAGGGACCGTCTCACGGTTGGGCCTTCTGGAACTCGATCAACACGGAACTCGCGATTCCGGGTATC GCCGAAGGCCGGCCAGCCCTGGAGATCGCGACGACCCAGCGCGACATGGACTATCTCCACGTCGTCAACTGGAAGAAGGC AGAAGAGGTCATCGCGGCCGGCAAGTACGAGGAGATCAACGGTTTCAAGGTCATCCGGATGGACGTCGCAGCGAAGGAAG GCGTTCTCTTCCTGATCCCGGAGCCGAAGAGCCCGCACGGTGTAGACGTGACGCCAGGTGGGGACTACATCGTCGTGGCC GGGAAGCTCGATCCGCACGTGACGGTCTACAGCTTCGCCAAGATCCAGCAAGCGATCCAGGCTGGCCAGTGGGATACCGA CGAGTATGGCATTCCCGTCTTGCCGTTCGAGCAGTGTGTGGAAGCACAGGTGGAGCTGGGGCTCGGTCCGCTCCATACCC AGTTCGACGACCAGGGTTACGCCTACACGAGCTTGTTCCTGGACAGCGCCGTGGCGAAGTGGGCACTCGGCAAGCCATAT CGTGACGATGGCTGGAAGCTCGTCGAGAAGCTACCGGTGCAGTACAACATCGGCCACTTGGCCGCTGTCGAGGGAGATAC GACCAAGCCGGCCGGTCGCTTCCTGGTCGTCCACAACAAGTGGTCGGTCGATCGTTACGCCAGCCTCGGGCCGCTTCTGC CGCAGAATGCGCAACTGGTCTCGATCGCCCCGAATCAGCCGATGCGAGTCCTCTACGACTGCCCGATCGGTATCGGCGAA CCGCACTACGCCCAGATTATCAAGCGGGAGCGGATCAAGTCGTGGGAGATTTATCCCGAGGTCGGCTGGAATCCGCACAC GCAAAGCACCGATCCCAACGCCGTGCTCAAGGTCGGCGAGGAGCGGATCGAGCGCCGCGGCAAGACGGTCGAGATCTGGG GTGTGCTCCTGCGCAGCCAGATTCGTCCCGATCTGATCGAGGTGGAGCAGGGGGACGAGGTGATCTGGCACCTCACCAAC ATCGAGCGTGCTAAGGATGCCACGCACGGGTTCGCCCTCGGTGGCTACAACATCAACCTCAGTCTCGAGCCGGGCGAGAC GCAGACCATCCGCTTCAAGGCCGATATCCCAGGCACCTTCCCGTTCTACTGCACGGAGTTCTGCTCCGCCCTGCATCTCG AGATGATGGGCTACTTCCTGGTGAAGCCGACCTGA
Upstream 100 bases:
>100_bases CGCTCGCCACATCGTGAGCAGTCGCCTTGCGCTCGGCTCCTACCCGTTCGGGTAGGAAGAGACTCCCCGGTTGGAGAGTC GCGAAACTACCCGCCTGGGC
Downstream 100 bases:
>100_bases TCCCGCAGCGGTGGGGCTGAGGGAATTTCCCTCAGCCCCACTTCGACCGGTAACAGGCAAACCATCGAGTCGAGAAAGGA TCGGAACCATGACCGGCATC
Product: nitrous-oxide reductase (N(2)OR) (N2Oreductase)
Products: NA
Alternate protein names: N(2)OR; N2O reductase [H]
Number of amino acids: Translated: 704; Mature: 704
Protein sequence:
>704_residues MFAPSFPDETENGNEERQGPHRMSRGGSTMAERQDRPPSSIGQRKVSRRGLLGTAAGLSAGALLASCSVFQRKEETPKLG ASADEIIKARQLTPEDVTAALMTYVPSGKYDEYLMFSSTGHGGQVLVHGLPSMRLLKVIAVFTPEPWQGYGYGGYTNEVL EGGYFHGKPILWGDTHHPALSETNGEYDGEFLFINDKANGRVAVIDLRDFETKQIVKNPLLVNEHGGCFVTPNTEYVLEA DQYSVPLGGVYAPITEYKEKYRGVLTFWKFDRQKGRIVPEQSFAIETPPYWHDLADAGKGPSHGWAFWNSINTELAIPGI AEGRPALEIATTQRDMDYLHVVNWKKAEEVIAAGKYEEINGFKVIRMDVAAKEGVLFLIPEPKSPHGVDVTPGGDYIVVA GKLDPHVTVYSFAKIQQAIQAGQWDTDEYGIPVLPFEQCVEAQVELGLGPLHTQFDDQGYAYTSLFLDSAVAKWALGKPY RDDGWKLVEKLPVQYNIGHLAAVEGDTTKPAGRFLVVHNKWSVDRYASLGPLLPQNAQLVSIAPNQPMRVLYDCPIGIGE PHYAQIIKRERIKSWEIYPEVGWNPHTQSTDPNAVLKVGEERIERRGKTVEIWGVLLRSQIRPDLIEVEQGDEVIWHLTN IERAKDATHGFALGGYNINLSLEPGETQTIRFKADIPGTFPFYCTEFCSALHLEMMGYFLVKPT
Sequences:
>Translated_704_residues MFAPSFPDETENGNEERQGPHRMSRGGSTMAERQDRPPSSIGQRKVSRRGLLGTAAGLSAGALLASCSVFQRKEETPKLG ASADEIIKARQLTPEDVTAALMTYVPSGKYDEYLMFSSTGHGGQVLVHGLPSMRLLKVIAVFTPEPWQGYGYGGYTNEVL EGGYFHGKPILWGDTHHPALSETNGEYDGEFLFINDKANGRVAVIDLRDFETKQIVKNPLLVNEHGGCFVTPNTEYVLEA DQYSVPLGGVYAPITEYKEKYRGVLTFWKFDRQKGRIVPEQSFAIETPPYWHDLADAGKGPSHGWAFWNSINTELAIPGI AEGRPALEIATTQRDMDYLHVVNWKKAEEVIAAGKYEEINGFKVIRMDVAAKEGVLFLIPEPKSPHGVDVTPGGDYIVVA GKLDPHVTVYSFAKIQQAIQAGQWDTDEYGIPVLPFEQCVEAQVELGLGPLHTQFDDQGYAYTSLFLDSAVAKWALGKPY RDDGWKLVEKLPVQYNIGHLAAVEGDTTKPAGRFLVVHNKWSVDRYASLGPLLPQNAQLVSIAPNQPMRVLYDCPIGIGE PHYAQIIKRERIKSWEIYPEVGWNPHTQSTDPNAVLKVGEERIERRGKTVEIWGVLLRSQIRPDLIEVEQGDEVIWHLTN IERAKDATHGFALGGYNINLSLEPGETQTIRFKADIPGTFPFYCTEFCSALHLEMMGYFLVKPT >Mature_704_residues MFAPSFPDETENGNEERQGPHRMSRGGSTMAERQDRPPSSIGQRKVSRRGLLGTAAGLSAGALLASCSVFQRKEETPKLG ASADEIIKARQLTPEDVTAALMTYVPSGKYDEYLMFSSTGHGGQVLVHGLPSMRLLKVIAVFTPEPWQGYGYGGYTNEVL EGGYFHGKPILWGDTHHPALSETNGEYDGEFLFINDKANGRVAVIDLRDFETKQIVKNPLLVNEHGGCFVTPNTEYVLEA DQYSVPLGGVYAPITEYKEKYRGVLTFWKFDRQKGRIVPEQSFAIETPPYWHDLADAGKGPSHGWAFWNSINTELAIPGI AEGRPALEIATTQRDMDYLHVVNWKKAEEVIAAGKYEEINGFKVIRMDVAAKEGVLFLIPEPKSPHGVDVTPGGDYIVVA GKLDPHVTVYSFAKIQQAIQAGQWDTDEYGIPVLPFEQCVEAQVELGLGPLHTQFDDQGYAYTSLFLDSAVAKWALGKPY RDDGWKLVEKLPVQYNIGHLAAVEGDTTKPAGRFLVVHNKWSVDRYASLGPLLPQNAQLVSIAPNQPMRVLYDCPIGIGE PHYAQIIKRERIKSWEIYPEVGWNPHTQSTDPNAVLKVGEERIERRGKTVEIWGVLLRSQIRPDLIEVEQGDEVIWHLTN IERAKDATHGFALGGYNINLSLEPGETQTIRFKADIPGTFPFYCTEFCSALHLEMMGYFLVKPT
Specific function: Nitrous-oxide reductase is part of a bacterial respiratory system which is activated under anaerobic conditions in the presence of nitrate or nitrous oxide [H]
COG id: COG4263
COG function: function code C; Nitrous oxide reductase
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the cytochrome c oxidase subunit 2 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008972 - InterPro: IPR002429 - InterPro: IPR011045 - InterPro: IPR006311 - InterPro: IPR015943 [H]
Pfam domain/function: PF00116 COX2 [H]
EC number: =1.7.99.6 [H]
Molecular weight: Translated: 78336; Mature: 78336
Theoretical pI: Translated: 5.42; Mature: 5.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFAPSFPDETENGNEERQGPHRMSRGGSTMAERQDRPPSSIGQRKVSRRGLLGTAAGLSA CCCCCCCCCCCCCCCHHCCCHHHHCCCCHHHHHCCCCCHHHHHHHHHHCCCEEECCCCHH GALLASCSVFQRKEETPKLGASADEIIKARQLTPEDVTAALMTYVPSGKYDEYLMFSSTG HHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCEEEEECCC HGGQVLVHGLPSMRLLKVIAVFTPEPWQGYGYGGYTNEVLEGGYFHGKPILWGDTHHPAL CCCEEEEECCCHHHHHHHHHEECCCCCCCCCCCCCHHHHHCCCCCCCCEEEECCCCCCCC SETNGEYDGEFLFINDKANGRVAVIDLRDFETKQIVKNPLLVNEHGGCFVTPNTEYVLEA CCCCCCCCCEEEEEECCCCCEEEEEEECCCCHHHHHHCCEEEECCCCEEECCCCCEEEEC DQYSVPLGGVYAPITEYKEKYRGVLTFWKFDRQKGRIVPEQSFAIETPPYWHDLADAGKG CCCCCCCCCEEHHHHHHHHHHCCEEEEEEECCCCCCCCCCCCEEECCCCCHHHHHHCCCC PSHGWAFWNSINTELAIPGIAEGRPALEIATTQRDMDYLHVVNWKKAEEVIAAGKYEEIN CCCCEEEEECCCCEEECCCCCCCCCCEEEEECCCCCCEEEEECCHHHHHHHHCCCCCCCC GFKVIRMDVAAKEGVLFLIPEPKSPHGVDVTPGGDYIVVAGKLDPHVTVYSFAKIQQAIQ CEEEEEEEEECCCCEEEEEECCCCCCCEEECCCCCEEEEEECCCCCEEEHHHHHHHHHHH AGQWDTDEYGIPVLPFEQCVEAQVELGLGPLHTQFDDQGYAYTSLFLDSAVAKWALGKPY CCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHCCCCC RDDGWKLVEKLPVQYNIGHLAAVEGDTTKPAGRFLVVHNKWSVDRYASLGPLLPQNAQLV CCCCHHHHHHCCCEECCCEEEEECCCCCCCCCCEEEEECCCCCHHHHHCCCCCCCCCEEE SIAPNQPMRVLYDCPIGIGEPHYAQIIKRERIKSWEIYPEVGWNPHTQSTDPNAVLKVGE EECCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCHHHHHHHH ERIERRGKTVEIWGVLLRSQIRPDLIEVEQGDEVIWHLTNIERAKDATHGFALGGYNINL HHHHHCCCEEEEHHHHHHHHCCCCEEEECCCCEEEEEECCCHHHHCCCCCEEEECEEEEE SLEPGETQTIRFKADIPGTFPFYCTEFCSALHLEMMGYFLVKPT EECCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHCEEEEECC >Mature Secondary Structure MFAPSFPDETENGNEERQGPHRMSRGGSTMAERQDRPPSSIGQRKVSRRGLLGTAAGLSA CCCCCCCCCCCCCCCHHCCCHHHHCCCCHHHHHCCCCCHHHHHHHHHHCCCEEECCCCHH GALLASCSVFQRKEETPKLGASADEIIKARQLTPEDVTAALMTYVPSGKYDEYLMFSSTG HHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCEEEEECCC HGGQVLVHGLPSMRLLKVIAVFTPEPWQGYGYGGYTNEVLEGGYFHGKPILWGDTHHPAL CCCEEEEECCCHHHHHHHHHEECCCCCCCCCCCCCHHHHHCCCCCCCCEEEECCCCCCCC SETNGEYDGEFLFINDKANGRVAVIDLRDFETKQIVKNPLLVNEHGGCFVTPNTEYVLEA CCCCCCCCCEEEEEECCCCCEEEEEEECCCCHHHHHHCCEEEECCCCEEECCCCCEEEEC DQYSVPLGGVYAPITEYKEKYRGVLTFWKFDRQKGRIVPEQSFAIETPPYWHDLADAGKG CCCCCCCCCEEHHHHHHHHHHCCEEEEEEECCCCCCCCCCCCEEECCCCCHHHHHHCCCC PSHGWAFWNSINTELAIPGIAEGRPALEIATTQRDMDYLHVVNWKKAEEVIAAGKYEEIN CCCCEEEEECCCCEEECCCCCCCCCCEEEEECCCCCCEEEEECCHHHHHHHHCCCCCCCC GFKVIRMDVAAKEGVLFLIPEPKSPHGVDVTPGGDYIVVAGKLDPHVTVYSFAKIQQAIQ CEEEEEEEEECCCCEEEEEECCCCCCCEEECCCCCEEEEEECCCCCEEEHHHHHHHHHHH AGQWDTDEYGIPVLPFEQCVEAQVELGLGPLHTQFDDQGYAYTSLFLDSAVAKWALGKPY CCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHCCCCC RDDGWKLVEKLPVQYNIGHLAAVEGDTTKPAGRFLVVHNKWSVDRYASLGPLLPQNAQLV CCCCHHHHHHCCCEECCCEEEEECCCCCCCCCCEEEEECCCCCHHHHHCCCCCCCCCEEE SIAPNQPMRVLYDCPIGIGEPHYAQIIKRERIKSWEIYPEVGWNPHTQSTDPNAVLKVGE EECCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCHHHHHHHH ERIERRGKTVEIWGVLLRSQIRPDLIEVEQGDEVIWHLTNIERAKDATHGFALGGYNINL HHHHHCCCEEEEHHHHHHHHCCCCEEEECCCCEEEEEECCCHHHHCCCCCEEEECEEEEE SLEPGETQTIRFKADIPGTFPFYCTEFCSALHLEMMGYFLVKPT EECCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11756688 [H]