Definition Thermomicrobium roseum DSM 5159 plasmid unnamed, complete sequence.
Accession NC_011961
Length 917,738

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The map label for this gene is 221635567

Identifier: 221635567

GI number: 221635567

Start: 151378

End: 151845

Strand: Reverse

Name: 221635567

Synonym: trd_A0160

Alternate gene names: NA

Gene position: 151845-151378 (Counterclockwise)

Preceding gene: 221635569

Following gene: 221635565

Centisome position: 16.55

GC content: 70.09

Gene sequence:

>468_bases
ATGACGCACGATCAGGAGCCGTATGCCCGGGGTATCGTTCCGGAGCGACCGTTCGCCGCGGTCCGACCGTTGGTCGGCGA
ATTGGTCGCCGTCTTGGCCGTCAGCTTCCCCGACCGCAACCTGGAACTGGAACCGTTCGGCTCGCGAGCCTTCCCCGATG
GTGCCATCGCCGAACTCTGCGTGACCGACCAACCGGACGCTCGACCGGGCCAGCGGGTCGCCCGGGCCGCCTACCTCGGC
TTCGTTCGCTTCCCGATCGGGGGCATCGTCGCCGTGGGTGCGCGCTGCTCCGTAGCCGGGGAGGAGATCGGCGAGGTGGT
CGGGTTCGATGGCGTCCATGCTCCCAACCACTGGAACATCGTCGTGCGCAGCGCACGCTTCGCCGATGGCGCAGCCCGCG
GTCTACGCCTCGGCGCCACGGTGACGCTCAGCGGCCCGGCCACCGCGAGCGAGCTGGACAGCCCCTGA

Upstream 100 bases:

>100_bases
TCCTCTCCTCTATCCTCGTGTATCCTCGTGCGCCGTGCGCGCTGCACCTGCGCCATCATACGTCCGGCGAGTCACCAGCG
ACGAGCAGGAGGTGAGCAGG

Downstream 100 bases:

>100_bases
CCGCCGCCCGCACCGGGCGCGCCGCCGATGGCCGAACCGGCCGGTCGAGCGACCCCACTGCGCGGTGACGAGCGAGGCAG
CCCGGATCCCGTCCCATCGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 155; Mature: 154

Protein sequence:

>155_residues
MTHDQEPYARGIVPERPFAAVRPLVGELVAVLAVSFPDRNLELEPFGSRAFPDGAIAELCVTDQPDARPGQRVARAAYLG
FVRFPIGGIVAVGARCSVAGEEIGEVVGFDGVHAPNHWNIVVRSARFADGAARGLRLGATVTLSGPATASELDSP

Sequences:

>Translated_155_residues
MTHDQEPYARGIVPERPFAAVRPLVGELVAVLAVSFPDRNLELEPFGSRAFPDGAIAELCVTDQPDARPGQRVARAAYLG
FVRFPIGGIVAVGARCSVAGEEIGEVVGFDGVHAPNHWNIVVRSARFADGAARGLRLGATVTLSGPATASELDSP
>Mature_154_residues
THDQEPYARGIVPERPFAAVRPLVGELVAVLAVSFPDRNLELEPFGSRAFPDGAIAELCVTDQPDARPGQRVARAAYLGF
VRFPIGGIVAVGARCSVAGEEIGEVVGFDGVHAPNHWNIVVRSARFADGAARGLRLGATVTLSGPATASELDSP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16273; Mature: 16141

Theoretical pI: Translated: 5.20; Mature: 5.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTHDQEPYARGIVPERPFAAVRPLVGELVAVLAVSFPDRNLELEPFGSRAFPDGAIAELC
CCCCCCCHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCCCCCCCEEEE
VTDQPDARPGQRVARAAYLGFVRFPIGGIVAVGARCSVAGEEIGEVVGFDGVHAPNHWNI
ECCCCCCCHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHCCCCCCCCCCCEE
VVRSARFADGAARGLRLGATVTLSGPATASELDSP
EEEECCCCCCCCCCEEECEEEEECCCCCHHCCCCC
>Mature Secondary Structure 
THDQEPYARGIVPERPFAAVRPLVGELVAVLAVSFPDRNLELEPFGSRAFPDGAIAELC
CCCCCCHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCCCCCCCEEEE
VTDQPDARPGQRVARAAYLGFVRFPIGGIVAVGARCSVAGEEIGEVVGFDGVHAPNHWNI
ECCCCCCCHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHCCCCCCCCCCCEE
VVRSARFADGAARGLRLGATVTLSGPATASELDSP
EEEECCCCCCCCCCEEECEEEEECCCCCHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA