| Definition | Thermomicrobium roseum DSM 5159 plasmid unnamed, complete sequence. |
|---|---|
| Accession | NC_011961 |
| Length | 917,738 |
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The map label for this gene is 221635560
Identifier: 221635560
GI number: 221635560
Start: 143695
End: 143988
Strand: Reverse
Name: 221635560
Synonym: trd_A0154
Alternate gene names: NA
Gene position: 143988-143695 (Counterclockwise)
Preceding gene: 221635561
Following gene: 221635559
Centisome position: 15.69
GC content: 67.69
Gene sequence:
>294_bases ATGCTGTCTCGCCCCCGAGCTGCACCGCCGAGGAGAGGTGTTCCTGAGGAACGGAGAACAGCGAGAGCCAGCGGCTGTTC CCGCGCTGCTCGAGCCGGGCCAGGAGCGCCAGCTGGCCACGCCCCCGCTCTCGCGCGCACTGCTGCCACAGCCGATCGCA CCCGACCGTACCGGCGCGGCGGGATCGAACGTCGGCTCGCCATTCCGGCACCTACGGTGCGCTGTGTCGCCGTAACAGCG GAGTCGAGAAAACCCTGGCACACTGCACGAGGCAGAATTGGCACACTTATCTGA
Upstream 100 bases:
>100_bases ATGTTCTCCCAGCGGTCGTGCCGGACGCCGCGCTCGTCCTGAGCTGGTCCGCGCTGGCCGTCGCACTCGCGCACGCGCTC GGCATCCGCCTCCGGCCCTG
Downstream 100 bases:
>100_bases GTGGCGGGCATCACCGCCGCGTTCGTCGAAGTGCAACGGGTAAACTTTAGAAGCGAACATATTGCGTCGGAGAAACACAT AAAGGAGAGGATCATGACGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 97; Mature: 97
Protein sequence:
>97_residues MLSRPRAAPPRRGVPEERRTARASGCSRAARAGPGAPAGHAPALARTAATADRTRPYRRGGIERRLAIPAPTVRCVAVTA ESRKPWHTARGRIGTLI
Sequences:
>Translated_97_residues MLSRPRAAPPRRGVPEERRTARASGCSRAARAGPGAPAGHAPALARTAATADRTRPYRRGGIERRLAIPAPTVRCVAVTA ESRKPWHTARGRIGTLI >Mature_97_residues MLSRPRAAPPRRGVPEERRTARASGCSRAARAGPGAPAGHAPALARTAATADRTRPYRRGGIERRLAIPAPTVRCVAVTA ESRKPWHTARGRIGTLI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10325; Mature: 10325
Theoretical pI: Translated: 12.59; Mature: 12.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLSRPRAAPPRRGVPEERRTARASGCSRAARAGPGAPAGHAPALARTAATADRTRPYRRG CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCHHHC GIERRLAIPAPTVRCVAVTAESRKPWHTARGRIGTLI CCCCEEECCCCCEEEEEEECCCCCCCCCCCCCCCCCC >Mature Secondary Structure MLSRPRAAPPRRGVPEERRTARASGCSRAARAGPGAPAGHAPALARTAATADRTRPYRRG CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCHHHC GIERRLAIPAPTVRCVAVTAESRKPWHTARGRIGTLI CCCCEEECCCCCEEEEEEECCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA