Definition Thermomicrobium roseum DSM 5159 plasmid unnamed, complete sequence.
Accession NC_011961
Length 917,738

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The map label for this gene is 221635551

Identifier: 221635551

GI number: 221635551

Start: 134050

End: 136404

Strand: Reverse

Name: 221635551

Synonym: trd_A0144

Alternate gene names: NA

Gene position: 136404-134050 (Counterclockwise)

Preceding gene: 221635552

Following gene: 221635548

Centisome position: 14.86

GC content: 67.47

Gene sequence:

>2355_bases
GTGCGTCTCGGCGCGCTCGGGCGCGGTGGACCAGTTCCCAGCCGCCTCCCAGCCGCCTCCCCCGCGCGACTGCGCTGGCA
GCGATCGCGAGCCGGGCGCGGGCCAACGGACAGCCGATCGGCGAGCAGCCGCACCGTCACCGGCGCGACCAGCCTGCGCC
AGCTGACCGAATCCTTCCTCCTCGTCCGCATCCAGGCACCGCGCGCCGGAGGAGCCGGTTCCTGCCTTCCGCCTGATCGT
TCGGCGTCGAGTCGGGCTCGGCCAGCAAAGCCCGACAACGCACCGGCGCGCCTGCACCGGTCAGGCCTCGATGGCGACGC
AGCGTCCCACCCAACGTGCCGCCACCTGACGCCCCGCGGGCGCCCCGGTGTGCCCAGTGGACCAGGAATCCGTGCCCACG
CCGCTCGCCGGGATGCAGTTGATCACCGCGCCTACCGAGCGGTGGAAAAGCACTCCGGCCAGCTGCGCACCGTTCGCGTG
GCACCACGAGCGGCAGGGATCGCTCCTCCGGACATCACCGGAGACGCGTGGATCATCACCGATAGTCCACGTAAATTGCG
GAGGAAATGGATGGAACCCTCTTGTGACTTGAATCCAGTACTGCGTGGCGCTATCATGACGCCAGGGTGGCGCAGCAGAG
GGGAGCGCCGGATGCCCGATCCACCGCTGACGGCCGATGAGCAGCCCGAGCGCAGCGGCGACGACGTTCGTCGGCGCGGT
TGGTTCTGGCACTGGAACACCATCATCACGCAGTTCGCGCCCTTGATCGGTCTCAAGGGGGTCGGTTTGCTCAATTCCTA
TACCGTCTGGACCGACCGTCGGGAGCATTCACCCTATCGTGGGTACGCGTTCCCGTCCCAGCAGGCCGAAGCAGCGTTTT
ACGGGGAGGATCGTGCCGAACTGATCACCATCAACAAGATCCTGGTCGCGCTCGATCTGATCGAGATCCGCAAGGAAATG
GTCACGCGAACCGACGAGGCCGGTCGTCGATGGCGAGTCCCCCACAACTTCTACCGCGTCAAAGATCGCCCCGACGGCTT
CGTCCTCACCCCGGAGGCGGTGCTGCGCGTCGTCGAGCTGGCCGCCCGTGACGACGCCGTCTACCGCTACATCCGACACG
TCTTTTCCCCCCGCTTCGCCCCGATCGATCGCGACAACGTTTGGCACCAGATCCTTCCGGTCGTGCGCCAGCACCCCCTC
TGGCAAAAGCTGGCCGCTCGAGCAGCCGCTGAGGATGCCCGCGCCTCGGCTCGTACGCGCGCCGGTCACGTGCGGCGCAA
GCGCACAGCAGCCAGCGACGAGTCAGCCACATCGCTCAGCACCACTGTTGCCCAGAGCGACACTGCTCAGCCCGCCGATG
TTGCGCTGAGCAACAGTGGTTCACCGACCGTTGTTGCATCCAGCGACGATGGTTTCCCCAGCGAGAGCCGAAGCAGTGTT
GGCCCGGCCAACAGAGAGGAGGCAAGCAGTGTTGCTCCTGACGACACGACGTATCACCAAGGTGAGCCTACGACTACGAC
GACTGCCCGCGATCCTCAGGAAGTGGCTGAGCCGCCAGCCGGCGGTGCCGGTCCGTTGCTCGAACCGTCGCCGCACGTCA
TCGCCTGCTACGAAGCGGCGAACGCACGCCCCGCATCGCCGCTGGAGCGGACGCTCCTGGCCGAACTCGAGCGGGAGTTC
CTCCCCTTGGCCAGCGCACGCGGTGAAAGCTCAGCTGAACTCCTCGTCGCCGCGATCCGCGAAGCTGTCGCGTCCGGCTC
GCGCTACGTCGCCCCGAAGCGCATCCGCGAAATCCTCGCTCGCTGGGCGCGTCACGCCGTTCGGTCGAGCACTGCGACCA
CACGAGCAGTAAGCTCTCAGCCAGCTTCCTCTCTCGCCAGTTCCGCCGTTCCGGGTCTTCACGTCGACGGGCTCCTCGCG
CCGGACACGCTCGATCGACTCGTCACCTTGCTCGAGGAAGCGCTCGCCGCACGGCTGACTCGCTCGCAATCTTCTCCTTC
CCAACCGGGCGGTTCCTCGCTAGCGGTCTCCCTGGGCAACTCTCCCAGCGTGCTGGAGCGAGCGAACAGCGAGCAGTCCG
CCGGACTCGCCCCGCTCTGGTCGCTGGCCCAGGAGCATCTGAGCGAGCGTCTGCCTGCTTCGGCCATCGCCGAATGCATC
CGACCCGCTCGACTGCTGGCTGCATCCGACGCCGGACCGGTCGTGCTCGGTGTTCCCAGCGCGACGGTCCGGCGCCACCT
CGAGCGGCGTTGGCTCGCGCCTGTCCGCGAGGTGCTCGCGACCCTGCTCGATCGGCCAGTCGAGATCCACATCGTCACCT
TCGCCGAGTGGGAGGGCGGGAACAGTGCCAGCTGA

Upstream 100 bases:

>100_bases
GCCGGATCGGAAAACGCATTCGTGACGCGCGTGCTGTTCAGTAGCCGTACGACGCCGGTTCGCTGGACACGAGTCGACCA
GCCGCCTCTCGCGCGCGGTC

Downstream 100 bases:

>100_bases
GCATCCATCCTGCTCGCAACCGGCCACGATTCCTGCTCGCTGCGCCAGCGTCCTTGTCCGGGGCGTGGACGCTGGTCGAG
CGCACGGCTCTCACCGGCGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 784; Mature: 784

Protein sequence:

>784_residues
MRLGALGRGGPVPSRLPAASPARLRWQRSRAGRGPTDSRSASSRTVTGATSLRQLTESFLLVRIQAPRAGGAGSCLPPDR
SASSRARPAKPDNAPARLHRSGLDGDAASHPTCRHLTPRGRPGVPSGPGIRAHAARRDAVDHRAYRAVEKHSGQLRTVRV
APRAAGIAPPDITGDAWIITDSPRKLRRKWMEPSCDLNPVLRGAIMTPGWRSRGERRMPDPPLTADEQPERSGDDVRRRG
WFWHWNTIITQFAPLIGLKGVGLLNSYTVWTDRREHSPYRGYAFPSQQAEAAFYGEDRAELITINKILVALDLIEIRKEM
VTRTDEAGRRWRVPHNFYRVKDRPDGFVLTPEAVLRVVELAARDDAVYRYIRHVFSPRFAPIDRDNVWHQILPVVRQHPL
WQKLAARAAAEDARASARTRAGHVRRKRTAASDESATSLSTTVAQSDTAQPADVALSNSGSPTVVASSDDGFPSESRSSV
GPANREEASSVAPDDTTYHQGEPTTTTTARDPQEVAEPPAGGAGPLLEPSPHVIACYEAANARPASPLERTLLAELEREF
LPLASARGESSAELLVAAIREAVASGSRYVAPKRIREILARWARHAVRSSTATTRAVSSQPASSLASSAVPGLHVDGLLA
PDTLDRLVTLLEEALAARLTRSQSSPSQPGGSSLAVSLGNSPSVLERANSEQSAGLAPLWSLAQEHLSERLPASAIAECI
RPARLLAASDAGPVVLGVPSATVRRHLERRWLAPVREVLATLLDRPVEIHIVTFAEWEGGNSAS

Sequences:

>Translated_784_residues
MRLGALGRGGPVPSRLPAASPARLRWQRSRAGRGPTDSRSASSRTVTGATSLRQLTESFLLVRIQAPRAGGAGSCLPPDR
SASSRARPAKPDNAPARLHRSGLDGDAASHPTCRHLTPRGRPGVPSGPGIRAHAARRDAVDHRAYRAVEKHSGQLRTVRV
APRAAGIAPPDITGDAWIITDSPRKLRRKWMEPSCDLNPVLRGAIMTPGWRSRGERRMPDPPLTADEQPERSGDDVRRRG
WFWHWNTIITQFAPLIGLKGVGLLNSYTVWTDRREHSPYRGYAFPSQQAEAAFYGEDRAELITINKILVALDLIEIRKEM
VTRTDEAGRRWRVPHNFYRVKDRPDGFVLTPEAVLRVVELAARDDAVYRYIRHVFSPRFAPIDRDNVWHQILPVVRQHPL
WQKLAARAAAEDARASARTRAGHVRRKRTAASDESATSLSTTVAQSDTAQPADVALSNSGSPTVVASSDDGFPSESRSSV
GPANREEASSVAPDDTTYHQGEPTTTTTARDPQEVAEPPAGGAGPLLEPSPHVIACYEAANARPASPLERTLLAELEREF
LPLASARGESSAELLVAAIREAVASGSRYVAPKRIREILARWARHAVRSSTATTRAVSSQPASSLASSAVPGLHVDGLLA
PDTLDRLVTLLEEALAARLTRSQSSPSQPGGSSLAVSLGNSPSVLERANSEQSAGLAPLWSLAQEHLSERLPASAIAECI
RPARLLAASDAGPVVLGVPSATVRRHLERRWLAPVREVLATLLDRPVEIHIVTFAEWEGGNSAS
>Mature_784_residues
MRLGALGRGGPVPSRLPAASPARLRWQRSRAGRGPTDSRSASSRTVTGATSLRQLTESFLLVRIQAPRAGGAGSCLPPDR
SASSRARPAKPDNAPARLHRSGLDGDAASHPTCRHLTPRGRPGVPSGPGIRAHAARRDAVDHRAYRAVEKHSGQLRTVRV
APRAAGIAPPDITGDAWIITDSPRKLRRKWMEPSCDLNPVLRGAIMTPGWRSRGERRMPDPPLTADEQPERSGDDVRRRG
WFWHWNTIITQFAPLIGLKGVGLLNSYTVWTDRREHSPYRGYAFPSQQAEAAFYGEDRAELITINKILVALDLIEIRKEM
VTRTDEAGRRWRVPHNFYRVKDRPDGFVLTPEAVLRVVELAARDDAVYRYIRHVFSPRFAPIDRDNVWHQILPVVRQHPL
WQKLAARAAAEDARASARTRAGHVRRKRTAASDESATSLSTTVAQSDTAQPADVALSNSGSPTVVASSDDGFPSESRSSV
GPANREEASSVAPDDTTYHQGEPTTTTTARDPQEVAEPPAGGAGPLLEPSPHVIACYEAANARPASPLERTLLAELEREF
LPLASARGESSAELLVAAIREAVASGSRYVAPKRIREILARWARHAVRSSTATTRAVSSQPASSLASSAVPGLHVDGLLA
PDTLDRLVTLLEEALAARLTRSQSSPSQPGGSSLAVSLGNSPSVLERANSEQSAGLAPLWSLAQEHLSERLPASAIAECI
RPARLLAASDAGPVVLGVPSATVRRHLERRWLAPVREVLATLLDRPVEIHIVTFAEWEGGNSAS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 84859; Mature: 84859

Theoretical pI: Translated: 10.69; Mature: 10.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLGALGRGGPVPSRLPAASPARLRWQRSRAGRGPTDSRSASSRTVTGATSLRQLTESFL
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCEECHHHHHHHHHHHHE
LVRIQAPRAGGAGSCLPPDRSASSRARPAKPDNAPARLHRSGLDGDAASHPTCRHLTPRG
EEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCC
RPGVPSGPGIRAHAARRDAVDHRAYRAVEKHSGQLRTVRVAPRAAGIAPPDITGDAWIIT
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHCCCCCCCCCCCEEEEE
DSPRKLRRKWMEPSCDLNPVLRGAIMTPGWRSRGERRMPDPPLTADEQPERSGDDVRRRG
CCHHHHHHHHCCCCCCCCHHHHHHCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCHHHHCC
WFWHWNTIITQFAPLIGLKGVGLLNSYTVWTDRREHSPYRGYAFPSQQAEAAFYGEDRAE
CEEEHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
LITINKILVALDLIEIRKEMVTRTDEAGRRWRVPHNFYRVKDRPDGFVLTPEAVLRVVEL
EEHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCEEEECCCCCCEEECHHHHHHHHHH
AARDDAVYRYIRHVFSPRFAPIDRDNVWHQILPVVRQHPLWQKLAARAAAEDARASARTR
HHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
AGHVRRKRTAASDESATSLSTTVAQSDTAQPADVALSNSGSPTVVASSDDGFPSESRSSV
HHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCEEECCCCCCEEEECCCCCCCCCCCCCC
GPANREEASSVAPDDTTYHQGEPTTTTTARDPQEVAEPPAGGAGPLLEPSPHVIACYEAA
CCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCEEEEEECC
NARPASPLERTLLAELEREFLPLASARGESSAELLVAAIREAVASGSRYVAPKRIREILA
CCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH
RWARHAVRSSTATTRAVSSQPASSLASSAVPGLHVDGLLAPDTLDRLVTLLEEALAARLT
HHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCEECHHHHHHHHHHHHHHHHHHHH
RSQSSPSQPGGSSLAVSLGNSPSVLERANSEQSAGLAPLWSLAQEHLSERLPASAIAECI
HCCCCCCCCCCCEEEEECCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHH
RPARLLAASDAGPVVLGVPSATVRRHLERRWLAPVREVLATLLDRPVEIHIVTFAEWEGG
HHHHHHHCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEEECCC
NSAS
CCCC
>Mature Secondary Structure
MRLGALGRGGPVPSRLPAASPARLRWQRSRAGRGPTDSRSASSRTVTGATSLRQLTESFL
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCEECHHHHHHHHHHHHE
LVRIQAPRAGGAGSCLPPDRSASSRARPAKPDNAPARLHRSGLDGDAASHPTCRHLTPRG
EEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCC
RPGVPSGPGIRAHAARRDAVDHRAYRAVEKHSGQLRTVRVAPRAAGIAPPDITGDAWIIT
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHCCCCCCCCCCCEEEEE
DSPRKLRRKWMEPSCDLNPVLRGAIMTPGWRSRGERRMPDPPLTADEQPERSGDDVRRRG
CCHHHHHHHHCCCCCCCCHHHHHHCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCHHHHCC
WFWHWNTIITQFAPLIGLKGVGLLNSYTVWTDRREHSPYRGYAFPSQQAEAAFYGEDRAE
CEEEHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
LITINKILVALDLIEIRKEMVTRTDEAGRRWRVPHNFYRVKDRPDGFVLTPEAVLRVVEL
EEHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCEEEECCCCCCEEECHHHHHHHHHH
AARDDAVYRYIRHVFSPRFAPIDRDNVWHQILPVVRQHPLWQKLAARAAAEDARASARTR
HHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
AGHVRRKRTAASDESATSLSTTVAQSDTAQPADVALSNSGSPTVVASSDDGFPSESRSSV
HHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCEEECCCCCCEEEECCCCCCCCCCCCCC
GPANREEASSVAPDDTTYHQGEPTTTTTARDPQEVAEPPAGGAGPLLEPSPHVIACYEAA
CCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCEEEEEECC
NARPASPLERTLLAELEREFLPLASARGESSAELLVAAIREAVASGSRYVAPKRIREILA
CCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH
RWARHAVRSSTATTRAVSSQPASSLASSAVPGLHVDGLLAPDTLDRLVTLLEEALAARLT
HHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCEECHHHHHHHHHHHHHHHHHHHH
RSQSSPSQPGGSSLAVSLGNSPSVLERANSEQSAGLAPLWSLAQEHLSERLPASAIAECI
HCCCCCCCCCCCEEEEECCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHH
RPARLLAASDAGPVVLGVPSATVRRHLERRWLAPVREVLATLLDRPVEIHIVTFAEWEGG
HHHHHHHCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEEECCC
NSAS
CCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA