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The map label for this gene is 221635516

Identifier: 221635516

GI number: 221635516

Start: 106181

End: 107512

Strand: Reverse

Name: 221635516

Synonym: trd_A0110

Alternate gene names: NA

Gene position: 107512-106181 (Counterclockwise)

Preceding gene: 221635517

Following gene: 221635507

Centisome position: 11.71

GC content: 68.54

Gene sequence:

>1332_bases
ATGAACCAGCCAGTGCGTCGCGTCCTCGTCCTCAACGTCGGGAAGCCGACGGACGGTAACGTCGCCGATCGACCGGAAGC
CTACGCCTTGCGCGAGGCTCGCCCGGACTTCGTCGCCTTCGTGTGCTCCCACGCCGCCGACTTCCAGGCGGGAAGCCTGC
GTTTCGTCGACGACTACGCCGCACTCACCGGTCTCCCACCTGAGCGCTACGAGGTCGTCTCGCTCGAGGATCCCGACGAT
CTGGTTGCCTGCTACCAGCGCTTGGTAGAGTGTTTCGCCGATCTCCGGCGTCGTTTCCCGGACGCTGAGTTCTTGGCCGA
CTACACCGCGGGAACCAAGTCGATGAGCGCTGCCCTGGTCCTGGCTGCCCTGGACAGCGAGGGACGGCCCGAGGTGCAAC
TCCGCCTGGTGCGGGGAGCGCGCGGACACCAGGCGACCGTGATCCCGGGGACAGAGAGCTTCGCCCCCGTCAGCGGCGTC
CATGACGTCCGGGCGCGTCGCTTCGTCGGGTTAGCGCGTCTCGCGCTCGAGCGCTTCGATTACGCTGAGGCGGCGGCTAC
GCTCGACCAGGCTCTGCAGCGCGAACTCTCGGCAGCCCTGCGCACCCGGCTCGAACATGCCCGCAACCTCTGCCGTGCCT
TCGATGCCTGGGATCGCTACGAGCTGGCGACAGCGAAGACGTTTTTGGAGCTGTACCGGCGCGACTGGCACAGCTGGCTC
ACCGTTCTGGACCAGCTCACCAGCGTCGTCCACGCCTTCGCGCCGGGTCAGCCGGATGCTCGCGGGTCGCGCCTGACTCC
CCTCGAGCAGCTGCGCGATCCCTACATCGCCGTCGAGGACATCCTCTTCAATGCCGAGCGTCGGGCGACCCAGTCCCGCT
ACGACGATGCAGTCGCCCGCGTCTACCGCGCGCTCGAGCTGCTCGTGCAGTTGCGCCTCTGGCTGGGACATCGCATCGAC
ACGAGCGACGTCGAGCTGGCGGGCCTTCCCGAGGCCTGGCGAGCCAAGCTCGCTGGGCGAACCGAGGGAAACGGGCCGGT
CCGGCTCGCCCTCGTTCAGGCCTGGGATCTTTTGGCTGACCTCCCCGATGAGCCGCTCGCTGGCTGGCTCGCCGCCGAGC
GTCCGCGCCTCCTGCAGTGGACGCAGCACCGCAACTATTCGCTCCTCGCCCACGGCTTCGCGCCCGTCACCGCGACCGGT
TGGCGCGAGCACGGCCAGGCAGGTCTCGCGCTCTGCCGTGCCGCCTTGGCCGAACTGAGTCGTACCCGTGTCCGGCGCGC
GCTGCAGCACCAGCAATTCCCCCGCGCCGACCTCCTGGCCAATCTTGACTGA

Upstream 100 bases:

>100_bases
GCAGCTCGCTCTGGGCTGGCTCCGCAACGGGTTGGCCCAGCTCGGTTTCGGGGCCAAGACGACGAGCGGCTACGGCGTGT
TCCGGAACAGGGAGTGAACG

Downstream 100 bases:

>100_bases
GGGGAAGGGGGTACGGTCGGGCGGACTGGTGGTGTGCTGTGCACCAGCTGTGCTGGGCAGAGAGTTACGAGTCCTCGCCG
CCGGAGGACAGTGCGGTTCA

Product: crispr-associated protein, family

Products: NA

Alternate protein names: Cytoplasmic Protein; Crispr-Associated Protein Family

Number of amino acids: Translated: 443; Mature: 443

Protein sequence:

>443_residues
MNQPVRRVLVLNVGKPTDGNVADRPEAYALREARPDFVAFVCSHAADFQAGSLRFVDDYAALTGLPPERYEVVSLEDPDD
LVACYQRLVECFADLRRRFPDAEFLADYTAGTKSMSAALVLAALDSEGRPEVQLRLVRGARGHQATVIPGTESFAPVSGV
HDVRARRFVGLARLALERFDYAEAAATLDQALQRELSAALRTRLEHARNLCRAFDAWDRYELATAKTFLELYRRDWHSWL
TVLDQLTSVVHAFAPGQPDARGSRLTPLEQLRDPYIAVEDILFNAERRATQSRYDDAVARVYRALELLVQLRLWLGHRID
TSDVELAGLPEAWRAKLAGRTEGNGPVRLALVQAWDLLADLPDEPLAGWLAAERPRLLQWTQHRNYSLLAHGFAPVTATG
WREHGQAGLALCRAALAELSRTRVRRALQHQQFPRADLLANLD

Sequences:

>Translated_443_residues
MNQPVRRVLVLNVGKPTDGNVADRPEAYALREARPDFVAFVCSHAADFQAGSLRFVDDYAALTGLPPERYEVVSLEDPDD
LVACYQRLVECFADLRRRFPDAEFLADYTAGTKSMSAALVLAALDSEGRPEVQLRLVRGARGHQATVIPGTESFAPVSGV
HDVRARRFVGLARLALERFDYAEAAATLDQALQRELSAALRTRLEHARNLCRAFDAWDRYELATAKTFLELYRRDWHSWL
TVLDQLTSVVHAFAPGQPDARGSRLTPLEQLRDPYIAVEDILFNAERRATQSRYDDAVARVYRALELLVQLRLWLGHRID
TSDVELAGLPEAWRAKLAGRTEGNGPVRLALVQAWDLLADLPDEPLAGWLAAERPRLLQWTQHRNYSLLAHGFAPVTATG
WREHGQAGLALCRAALAELSRTRVRRALQHQQFPRADLLANLD
>Mature_443_residues
MNQPVRRVLVLNVGKPTDGNVADRPEAYALREARPDFVAFVCSHAADFQAGSLRFVDDYAALTGLPPERYEVVSLEDPDD
LVACYQRLVECFADLRRRFPDAEFLADYTAGTKSMSAALVLAALDSEGRPEVQLRLVRGARGHQATVIPGTESFAPVSGV
HDVRARRFVGLARLALERFDYAEAAATLDQALQRELSAALRTRLEHARNLCRAFDAWDRYELATAKTFLELYRRDWHSWL
TVLDQLTSVVHAFAPGQPDARGSRLTPLEQLRDPYIAVEDILFNAERRATQSRYDDAVARVYRALELLVQLRLWLGHRID
TSDVELAGLPEAWRAKLAGRTEGNGPVRLALVQAWDLLADLPDEPLAGWLAAERPRLLQWTQHRNYSLLAHGFAPVTATG
WREHGQAGLALCRAALAELSRTRVRRALQHQQFPRADLLANLD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 49669; Mature: 49669

Theoretical pI: Translated: 6.74; Mature: 6.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNQPVRRVLVLNVGKPTDGNVADRPEAYALREARPDFVAFVCSHAADFQAGSLRFVDDYA
CCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHCCCCCCCEEEEHHHH
ALTGLPPERYEVVSLEDPDDLVACYQRLVECFADLRRRFPDAEFLADYTAGTKSMSAALV
HHHCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHH
LAALDSEGRPEVQLRLVRGARGHQATVIPGTESFAPVSGVHDVRARRFVGLARLALERFD
HEECCCCCCCCEEEEEEECCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
YAEAAATLDQALQRELSAALRTRLEHARNLCRAFDAWDRYELATAKTFLELYRRDWHSWL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
TVLDQLTSVVHAFAPGQPDARGSRLTPLEQLRDPYIAVEDILFNAERRATQSRYDDAVAR
HHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHHH
VYRALELLVQLRLWLGHRIDTSDVELAGLPEAWRAKLAGRTEGNGPVRLALVQAWDLLAD
HHHHHHHHHHHHHHHCCCCCCCCCEECCCCHHHHHHHCCCCCCCCCEEEHHHHHHHHHHC
LPDEPLAGWLAAERPRLLQWTQHRNYSLLAHGFAPVTATGWREHGQAGLALCRAALAELS
CCCCCHHHHHHHCCCHHHHHHHCCCCEEEECCCCCCCCCCCHHHCHHHHHHHHHHHHHHH
RTRVRRALQHQQFPRADLLANLD
HHHHHHHHHHHCCCCHHHHCCCC
>Mature Secondary Structure
MNQPVRRVLVLNVGKPTDGNVADRPEAYALREARPDFVAFVCSHAADFQAGSLRFVDDYA
CCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHCCCCCCCEEEEHHHH
ALTGLPPERYEVVSLEDPDDLVACYQRLVECFADLRRRFPDAEFLADYTAGTKSMSAALV
HHHCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHH
LAALDSEGRPEVQLRLVRGARGHQATVIPGTESFAPVSGVHDVRARRFVGLARLALERFD
HEECCCCCCCCEEEEEEECCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
YAEAAATLDQALQRELSAALRTRLEHARNLCRAFDAWDRYELATAKTFLELYRRDWHSWL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
TVLDQLTSVVHAFAPGQPDARGSRLTPLEQLRDPYIAVEDILFNAERRATQSRYDDAVAR
HHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHHH
VYRALELLVQLRLWLGHRIDTSDVELAGLPEAWRAKLAGRTEGNGPVRLALVQAWDLLAD
HHHHHHHHHHHHHHHCCCCCCCCCEECCCCHHHHHHHCCCCCCCCCEEEHHHHHHHHHHC
LPDEPLAGWLAAERPRLLQWTQHRNYSLLAHGFAPVTATGWREHGQAGLALCRAALAELS
CCCCCHHHHHHHCCCHHHHHHHCCCCEEEECCCCCCCCCCCHHHCHHHHHHHHHHHHHHH
RTRVRRALQHQQFPRADLLANLD
HHHHHHHHHHHCCCCHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA