Definition Thermomicrobium roseum DSM 5159 plasmid unnamed, complete sequence.
Accession NC_011961
Length 917,738

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The map label for this gene is 221635480

Identifier: 221635480

GI number: 221635480

Start: 63224

End: 63841

Strand: Reverse

Name: 221635480

Synonym: trd_A0074

Alternate gene names: NA

Gene position: 63841-63224 (Counterclockwise)

Preceding gene: 221635481

Following gene: 221635479

Centisome position: 6.96

GC content: 65.37

Gene sequence:

>618_bases
ATGTCTGGTGATGGAGAACTCCTCGAGCGGGCACGCAGCTGGGTCGCACCCTACTGGAACGCCCTGCATCTCTACCGGGC
ACTCGACTGGCTCTTCCTGCTCGCTCCGCAGGCGGATCTGGCGCTCCGGTTGGCGACACTCACCCATGACATGGAGCGCC
ATTTCCCCGGACCGGACTCGCCAGTGATGGATGCTCGACGCGGGATTCCCGATCGTTCCTACGAAGCGCAACATCAGGAA
CGCTCGGCCCGCATCGTCGCCGCCTGGCTCGAGGAGCAAGGCGCGGACCCGACACTGGTTCGCGCGGTCCGTGATCTCGT
CGCCGTGCACGAGTGGGGTGGCTGGCCGGAAGCTGATCTCCTCCAAGCCGCTGATTCCCTGTCGTTTCTCGAAGTCAATG
TGGATCGGTTCATCGCCTTCGGCCTGAGTGGCGAGCGTGGTTTTACGCCGGAGCTCGTCGCTCGCCATTTCCGTTACATG
GCGGAGCGGATCCGTTTGCCGCGAGCGCGCGAGCTGGCACGCCCCCTACTAGCCGCCGCGCTGGCGCGCCTGGAAGAGCG
CACCGGTAGAGCAGTCGAGGCAACCGTGGTCGCTCGCGAAAGGTCGTGCGATGGCTGA

Upstream 100 bases:

>100_bases
TGGAGTGCCGCAGGACGTCGAGTGGGCCATCGCTGGCGGCGAGCTTTTTGTCCTGCAGAGTCGCCCGATCACGACGCTCG
CCTGAGGAGAGGAGCAGCCG

Downstream 100 bases:

>100_bases
CTGCGCGGTCATCGCTCCAGCGACACTGGACGAGGTACTCTCCCTCCTCGCCGAAGCAGGTGATGCAGCCACTGTCGTCG
CCGGTGGCGTCTGGGTCACG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 205; Mature: 204

Protein sequence:

>205_residues
MSGDGELLERARSWVAPYWNALHLYRALDWLFLLAPQADLALRLATLTHDMERHFPGPDSPVMDARRGIPDRSYEAQHQE
RSARIVAAWLEEQGADPTLVRAVRDLVAVHEWGGWPEADLLQAADSLSFLEVNVDRFIAFGLSGERGFTPELVARHFRYM
AERIRLPRARELARPLLAAALARLEERTGRAVEATVVARERSCDG

Sequences:

>Translated_205_residues
MSGDGELLERARSWVAPYWNALHLYRALDWLFLLAPQADLALRLATLTHDMERHFPGPDSPVMDARRGIPDRSYEAQHQE
RSARIVAAWLEEQGADPTLVRAVRDLVAVHEWGGWPEADLLQAADSLSFLEVNVDRFIAFGLSGERGFTPELVARHFRYM
AERIRLPRARELARPLLAAALARLEERTGRAVEATVVARERSCDG
>Mature_204_residues
SGDGELLERARSWVAPYWNALHLYRALDWLFLLAPQADLALRLATLTHDMERHFPGPDSPVMDARRGIPDRSYEAQHQER
SARIVAAWLEEQGADPTLVRAVRDLVAVHEWGGWPEADLLQAADSLSFLEVNVDRFIAFGLSGERGFTPELVARHFRYMA
ERIRLPRARELARPLLAAALARLEERTGRAVEATVVARERSCDG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23163; Mature: 23031

Theoretical pI: Translated: 5.96; Mature: 5.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGDGELLERARSWVAPYWNALHLYRALDWLFLLAPQADLALRLATLTHDMERHFPGPDS
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCC
PVMDARRGIPDRSYEAQHQERSARIVAAWLEEQGADPTLVRAVRDLVAVHEWGGWPEADL
CHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHH
LQAADSLSFLEVNVDRFIAFGLSGERGFTPELVARHFRYMAERIRLPRARELARPLLAAA
HHHHHCHHHHEECHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
LARLEERTGRAVEATVVARERSCDG
HHHHHHHCCCHHHHHHHHHHCCCCC
>Mature Secondary Structure 
SGDGELLERARSWVAPYWNALHLYRALDWLFLLAPQADLALRLATLTHDMERHFPGPDS
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCC
PVMDARRGIPDRSYEAQHQERSARIVAAWLEEQGADPTLVRAVRDLVAVHEWGGWPEADL
CHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHH
LQAADSLSFLEVNVDRFIAFGLSGERGFTPELVARHFRYMAERIRLPRARELARPLLAAA
HHHHHCHHHHEECHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
LARLEERTGRAVEATVVARERSCDG
HHHHHHHCCCHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA