| Definition | Thermomicrobium roseum DSM 5159 plasmid unnamed, complete sequence. |
|---|---|
| Accession | NC_011961 |
| Length | 917,738 |
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The map label for this gene is ppsA [H]
Identifier: 221635481
GI number: 221635481
Start: 63857
End: 64828
Strand: Reverse
Name: ppsA [H]
Synonym: trd_A0075
Alternate gene names: 221635481
Gene position: 64828-63857 (Counterclockwise)
Preceding gene: 221635482
Following gene: 221635480
Centisome position: 7.06
GC content: 67.18
Gene sequence:
>972_bases ATGAGTCGTGCGGCGACCGTTGCTCTCGTCCGCTGGTTCCACGATCCGGCCTGTACCGACGTCCACCAGGCTGGTGGCAA GGGGGCAAGCCTCGCCCGCCTGGCCGCTGCTGATCTGCCGGTCCCGCCGGGCTTCGTGGTGACCAGCGCGGCTTTCGCTG CCTTTCTCGCCGAGAACGGGATCGACGCTCGCATTCGCGCGCTGCTCCAGCGCGTCGACCCCACCGAGCGCCGTGCGCTC GAGGACGTGGCAGCGGACATCCAAGAGCTCATTCTCACACAGCCCCTTCCACTGGAACTCGATGCTGCCGTCGCTGGCGC CTATGCCGAACTCGGACATGGCGAGGCGATTCCGGTCGCGGTCCGTTCCAGTGCGGTCGCGGAGGATTCTCAGCAGGCCT CCTTCGCTGGGCAGCAAGAGACGTTCCTCGATGTCCGCGGTGTGGACGACGTGCTCGCGCGTATCCGCGCCTGCTGGGCC TCCTTCTTCAGCCCACGAGCGCTCTTCTACCGTGCCCGCAAGGGGTCGCTCGACGATCTTGCCTTCGCGGTCGTCGTGCA GCAGCTCGTGGTGCCCGAGAAGGCTGGAGTCCTCTTCACTGTCGATCCTGTGCAGCGCCGGCCCGATGTCCTGGTCGTCG AGGCAGTGTGGGGCTTCGGCGAGGCGCTCGTCTCGGGAGAAGTGACGCCGGACCACTACGAGATCGAGCGTGGGAGTGGA CGCCTCCTGCGTTGCTTCGTCCCGCCCAAAACGCAGATGCTGGGGCGGGGCGCAACCGGTGGTCTCATCGCTCTCGCGGT GCCCGAGGAACAACAGCGGTTGCCGGTGCTCAGCGAGGCCGAGCGTGCGGCGCTCGTCGACTTGGCTGTTCGGGTCGAGG CCTTCTTTGGAGTGCCGCAGGACGTCGAGTGGGCCATCGCTGGCGGCGAGCTTTTTGTCCTGCAGAGTCGCCCGATCACG ACGCTCGCCTGA
Upstream 100 bases:
>100_bases CGCGACCGTACGGTTTCAAGGTCGCCGCCTTCCCCATCAAATGGGTCGGCACCACGGCGGCACCCGTCCGCGCGGTCGCC ATCGTCGAGGAGTAGGAGCG
Downstream 100 bases:
>100_bases GGAGAGGAGCAGCCGATGTCTGGTGATGGAGAACTCCTCGAGCGGGCACGCAGCTGGGTCGCACCCTACTGGAACGCCCT GCATCTCTACCGGGCACTCG
Product: phosphoenolpyruvate synthase (Pyruvate, water dikinase)(PEP synthase)
Products: NA
Alternate protein names: PEP synthase; Pyruvate, water dikinase [H]
Number of amino acids: Translated: 323; Mature: 322
Protein sequence:
>323_residues MSRAATVALVRWFHDPACTDVHQAGGKGASLARLAAADLPVPPGFVVTSAAFAAFLAENGIDARIRALLQRVDPTERRAL EDVAADIQELILTQPLPLELDAAVAGAYAELGHGEAIPVAVRSSAVAEDSQQASFAGQQETFLDVRGVDDVLARIRACWA SFFSPRALFYRARKGSLDDLAFAVVVQQLVVPEKAGVLFTVDPVQRRPDVLVVEAVWGFGEALVSGEVTPDHYEIERGSG RLLRCFVPPKTQMLGRGATGGLIALAVPEEQQRLPVLSEAERAALVDLAVRVEAFFGVPQDVEWAIAGGELFVLQSRPIT TLA
Sequences:
>Translated_323_residues MSRAATVALVRWFHDPACTDVHQAGGKGASLARLAAADLPVPPGFVVTSAAFAAFLAENGIDARIRALLQRVDPTERRAL EDVAADIQELILTQPLPLELDAAVAGAYAELGHGEAIPVAVRSSAVAEDSQQASFAGQQETFLDVRGVDDVLARIRACWA SFFSPRALFYRARKGSLDDLAFAVVVQQLVVPEKAGVLFTVDPVQRRPDVLVVEAVWGFGEALVSGEVTPDHYEIERGSG RLLRCFVPPKTQMLGRGATGGLIALAVPEEQQRLPVLSEAERAALVDLAVRVEAFFGVPQDVEWAIAGGELFVLQSRPIT TLA >Mature_322_residues SRAATVALVRWFHDPACTDVHQAGGKGASLARLAAADLPVPPGFVVTSAAFAAFLAENGIDARIRALLQRVDPTERRALE DVAADIQELILTQPLPLELDAAVAGAYAELGHGEAIPVAVRSSAVAEDSQQASFAGQQETFLDVRGVDDVLARIRACWAS FFSPRALFYRARKGSLDDLAFAVVVQQLVVPEKAGVLFTVDPVQRRPDVLVVEAVWGFGEALVSGEVTPDHYEIERGSGR LLRCFVPPKTQMLGRGATGGLIALAVPEEQQRLPVLSEAERAALVDLAVRVEAFFGVPQDVEWAIAGGELFVLQSRPITT LA
Specific function: Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate [H]
COG id: COG0574
COG function: function code G; Phosphoenolpyruvate synthase/pyruvate phosphate dikinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the PEP-utilizing enzyme family [H]
Homologues:
Organism=Escherichia coli, GI1787994, Length=345, Percent_Identity=35.6521739130435, Blast_Score=192, Evalue=2e-50, Organism=Caenorhabditis elegans, GI17564524, Length=318, Percent_Identity=32.3899371069182, Blast_Score=134, Evalue=6e-32,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013815 - InterPro: IPR013816 - InterPro: IPR008279 - InterPro: IPR006319 - InterPro: IPR018274 - InterPro: IPR000121 - InterPro: IPR002192 - InterPro: IPR015813 [H]
Pfam domain/function: PF00391 PEP-utilizers; PF02896 PEP-utilizers_C; PF01326 PPDK_N [H]
EC number: =2.7.9.2 [H]
Molecular weight: Translated: 34539; Mature: 34408
Theoretical pI: Translated: 4.63; Mature: 4.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRAATVALVRWFHDPACTDVHQAGGKGASLARLAAADLPVPPGFVVTSAAFAAFLAENG CCCHHHHHHHHHHCCCCCCHHHHCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCC IDARIRALLQRVDPTERRALEDVAADIQELILTQPLPLELDAAVAGAYAELGHGEAIPVA CCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHCCCCCEEEEE VRSSAVAEDSQQASFAGQQETFLDVRGVDDVLARIRACWASFFSPRALFYRARKGSLDDL ECCHHHHCCCHHHHCCCCCHHEEEECCHHHHHHHHHHHHHHHCCCHHHHHCCCCCCHHHH AFAVVVQQLVVPEKAGVLFTVDPVQRRPDVLVVEAVWGFGEALVSGEVTPDHYEIERGSG HHHHHHHHHHCCCCCCEEEEECCCCCCCCEEEEEEHHCCHHHHHCCCCCCCCEEEECCCC RLLRCFVPPKTQMLGRGATGGLIALAVPEEQQRLPVLSEAERAALVDLAVRVEAFFGVPQ CEEEEECCCCHHHHCCCCCCCEEEEECCCHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCC DVEWAIAGGELFVLQSRPITTLA CCEEEEECCEEEEEECCCCCCCC >Mature Secondary Structure SRAATVALVRWFHDPACTDVHQAGGKGASLARLAAADLPVPPGFVVTSAAFAAFLAENG CCHHHHHHHHHHCCCCCCHHHHCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCC IDARIRALLQRVDPTERRALEDVAADIQELILTQPLPLELDAAVAGAYAELGHGEAIPVA CCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHCCCCCEEEEE VRSSAVAEDSQQASFAGQQETFLDVRGVDDVLARIRACWASFFSPRALFYRARKGSLDDL ECCHHHHCCCHHHHCCCCCHHEEEECCHHHHHHHHHHHHHHHCCCHHHHHCCCCCCHHHH AFAVVVQQLVVPEKAGVLFTVDPVQRRPDVLVVEAVWGFGEALVSGEVTPDHYEIERGSG HHHHHHHHHHCCCCCCEEEEECCCCCCCCEEEEEEHHCCHHHHHCCCCCCCCEEEECCCC RLLRCFVPPKTQMLGRGATGGLIALAVPEEQQRLPVLSEAERAALVDLAVRVEAFFGVPQ CEEEEECCCCHHHHCCCCCCCEEEEECCCHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCC DVEWAIAGGELFVLQSRPITTLA CCEEEEECCEEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9371463 [H]