| Definition | Thermomicrobium roseum DSM 5159 plasmid unnamed, complete sequence. |
|---|---|
| Accession | NC_011961 |
| Length | 917,738 |
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The map label for this gene is 221635477
Identifier: 221635477
GI number: 221635477
Start: 61025
End: 61321
Strand: Reverse
Name: 221635477
Synonym: trd_A0071
Alternate gene names: NA
Gene position: 61321-61025 (Counterclockwise)
Preceding gene: 221635478
Following gene: 221635476
Centisome position: 6.68
GC content: 57.58
Gene sequence:
>297_bases ATGCCGTTCGTGGTCGTGGCGCACTATTACGCGAAGGAAGGGAAGGCCGATGAGATCGCGGCCATCCTGAAAGAGATGGT CACCCTCTCGCGGGCAGAACCTGGTTGTCTGGTTTACTATGTCAATCGTTCCCAGGACGATCCCCGGAAATTCTTGCTCT ACGAGCAGTACCGGAGTCGGGAGGACTACGAAGCGCACAAGGCTACGCCGTACTTTCAGGAGAAGATCCTCAACACCGTC GTGCCGATGCTGGAGAGTCGCGTGCCCGAGTTCTACGACCTGATCGAGCCGGAGTGA
Upstream 100 bases:
>100_bases TGTGGTCGAGCTCGAAGTCGAAGGGATCGGCATCCTGCGCAATCGCGTCGTGCGTGCTGTCGAGGGCTGAATCGCTGGTA CGGAAGGGAAGGAGGCTGTC
Downstream 100 bases:
>100_bases TGGTGGACCGCAGCCACAGGAAGGAGGGAAATCATGGCGGCGCAGCGACCTGAGGTGCAGCTGCCGGTGACATTCTTCGG CGACGAGTCGTTCCCGGTCG
Product: antibiotic biosynthesis monooxygenase
Products: NA
Alternate protein names: Monooxygenase
Number of amino acids: Translated: 98; Mature: 97
Protein sequence:
>98_residues MPFVVVAHYYAKEGKADEIAAILKEMVTLSRAEPGCLVYYVNRSQDDPRKFLLYEQYRSREDYEAHKATPYFQEKILNTV VPMLESRVPEFYDLIEPE
Sequences:
>Translated_98_residues MPFVVVAHYYAKEGKADEIAAILKEMVTLSRAEPGCLVYYVNRSQDDPRKFLLYEQYRSREDYEAHKATPYFQEKILNTV VPMLESRVPEFYDLIEPE >Mature_97_residues PFVVVAHYYAKEGKADEIAAILKEMVTLSRAEPGCLVYYVNRSQDDPRKFLLYEQYRSREDYEAHKATPYFQEKILNTVV PMLESRVPEFYDLIEPE
Specific function: Unknown
COG id: COG1359
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11554; Mature: 11423
Theoretical pI: Translated: 4.72; Mature: 4.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPFVVVAHYYAKEGKADEIAAILKEMVTLSRAEPGCLVYYVNRSQDDPRKFLLYEQYRSR CCEEEEEHHHHCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHCCC EDYEAHKATPYFQEKILNTVVPMLESRVPEFYDLIEPE CCCCHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHCCCC >Mature Secondary Structure PFVVVAHYYAKEGKADEIAAILKEMVTLSRAEPGCLVYYVNRSQDDPRKFLLYEQYRSR CEEEEEHHHHCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHCCC EDYEAHKATPYFQEKILNTVVPMLESRVPEFYDLIEPE CCCCHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA