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The map label for this gene is nudF [H]

Identifier: 221635460

GI number: 221635460

Start: 44232

End: 44720

Strand: Reverse

Name: nudF [H]

Synonym: trd_A0054

Alternate gene names: 221635460

Gene position: 44720-44232 (Counterclockwise)

Preceding gene: 221635461

Following gene: 221635439

Centisome position: 4.87

GC content: 65.03

Gene sequence:

>489_bases
ATGACCAGTCAGTACGCCCACGTCATCGCGGTCGGTGGAATCGTTCGCCGTGCCGGTTCCATTCTCCTGGTTCGCCAGCG
CTATGGCCCAGCCCAGGGAACCTATCTCTTTCCCGGTGGCCTGGTCGAGCCCGGTGAGACGCTCGACCAGGCCGTTCTCC
GCGAGATCGCCGAAGAGACCGGTATCCGTGCGATCGTCCGCGGTATCGTCGGCGTCCGCACTCGCTGCGACGGACCGCGT
TCCGATACCTATGTGATGTTCCTCCTCGACTGGTCAGCCGGCGAGCCGAGCCCCGATGGCCAGGAAATCGACGAGGCCCG
CTTCTTCACACTCGAGGAACTCCGTGACCCCGATCGGCCGATCACCGCACTCTCGCGCTACGTCGCTCTGCGCGTCCTCG
CTGGCTCGACCTGTCTCCAATCCTTCGCCAGCGACTTCGACTATGCTGCAGCTGGGCGCGATCCGGCCACCTGGCGCCTG
TTCTGCTGA

Upstream 100 bases:

>100_bases
CTTCCCACGACCCTGCTCTTGCGCCGGATCACCTGTCCAGCCACCATACTGAGCGAGCGGCTCCGCTCCGGTCTGCTGGG
CCACGAGGAGGGAAGCGCCG

Downstream 100 bases:

>100_bases
TGAGAACCAGTCGTCGTTGCAAGCGCTGTCGACAGCAGGGCGGTTGGTGCCGCTCCAGCCGACGTGCCGAGAAGTCTGTC
ATTCCCCGAGCCATTGAGCG

Product: NADH pyrophosphatase

Products: NA

Alternate protein names: ADP-ribose diphosphatase; ADP-ribose phosphohydrolase; Adenosine diphosphoribose pyrophosphatase; ADPR-PPase [H]

Number of amino acids: Translated: 162; Mature: 161

Protein sequence:

>162_residues
MTSQYAHVIAVGGIVRRAGSILLVRQRYGPAQGTYLFPGGLVEPGETLDQAVLREIAEETGIRAIVRGIVGVRTRCDGPR
SDTYVMFLLDWSAGEPSPDGQEIDEARFFTLEELRDPDRPITALSRYVALRVLAGSTCLQSFASDFDYAAAGRDPATWRL
FC

Sequences:

>Translated_162_residues
MTSQYAHVIAVGGIVRRAGSILLVRQRYGPAQGTYLFPGGLVEPGETLDQAVLREIAEETGIRAIVRGIVGVRTRCDGPR
SDTYVMFLLDWSAGEPSPDGQEIDEARFFTLEELRDPDRPITALSRYVALRVLAGSTCLQSFASDFDYAAAGRDPATWRL
FC
>Mature_161_residues
TSQYAHVIAVGGIVRRAGSILLVRQRYGPAQGTYLFPGGLVEPGETLDQAVLREIAEETGIRAIVRGIVGVRTRCDGPRS
DTYVMFLLDWSAGEPSPDGQEIDEARFFTLEELRDPDRPITALSRYVALRVLAGSTCLQSFASDFDYAAAGRDPATWRLF
C

Specific function: Unknown

COG id: COG1051

COG function: function code F; ADP-ribose pyrophosphatase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 nudix hydrolase domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020476
- InterPro:   IPR020084
- InterPro:   IPR000086
- InterPro:   IPR015797 [H]

Pfam domain/function: PF00293 NUDIX [H]

EC number: =3.6.1.13 [H]

Molecular weight: Translated: 17785; Mature: 17654

Theoretical pI: Translated: 4.79; Mature: 4.79

Prosite motif: PS00893 NUDIX

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSQYAHVIAVGGIVRRAGSILLVRQRYGPAQGTYLFPGGLVEPGETLDQAVLREIAEET
CCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCEECCCCCCCCCHHHHHHHHHHHHHHH
GIRAIVRGIVGVRTRCDGPRSDTYVMFLLDWSAGEPSPDGQEIDEARFFTLEELRDPDRP
HHHHHHHHHHHHHHCCCCCCCCEEEEEEEEECCCCCCCCCCCHHHHHHEEHHHHCCCCCH
ITALSRYVALRVLAGSTCLQSFASDFDYAAAGRDPATWRLFC
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECC
>Mature Secondary Structure 
TSQYAHVIAVGGIVRRAGSILLVRQRYGPAQGTYLFPGGLVEPGETLDQAVLREIAEET
CCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCEECCCCCCCCCHHHHHHHHHHHHHHH
GIRAIVRGIVGVRTRCDGPRSDTYVMFLLDWSAGEPSPDGQEIDEARFFTLEELRDPDRP
HHHHHHHHHHHHHHCCCCCCCCEEEEEEEEECCCCCCCCCCCHHHHHHEEHHHHCCCCCH
ITALSRYVALRVLAGSTCLQSFASDFDYAAAGRDPATWRLFC
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087; 9694840 [H]