| Definition | Thermomicrobium roseum DSM 5159 plasmid unnamed, complete sequence. |
|---|---|
| Accession | NC_011961 |
| Length | 917,738 |
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The map label for this gene is 221635439
Identifier: 221635439
GI number: 221635439
Start: 28768
End: 28998
Strand: Reverse
Name: 221635439
Synonym: trd_A0033
Alternate gene names: NA
Gene position: 28998-28768 (Counterclockwise)
Preceding gene: 221635460
Following gene: 221635438
Centisome position: 3.16
GC content: 66.23
Gene sequence:
>231_bases ATGATCACGGTCACGCGGCTGGACGGAAGCCGGGTCGTCGTCAATGCCGAACTCATCGAAATGGTCGAGGCTGTGCCCGA GACGGTCATCGTTCTCGTGACCCGGCGTCGCCTGATGGTCCGCGAGCCGGTCGATGAGGTCATCGACCGCGTGCTGGCCT ATCGACGGGGGCTCGGCGGGCAACCGGACGCGGTGCGTGGCCTACTCCCTCGCGCTGAGCACGACGATTGA
Upstream 100 bases:
>100_bases CAGGGTGTCTAGGACTTTTTGGCTGGCGAGCACGCTGGCTCGTTCTGCCGAAATGCTCAGTGCGGCACCACGCGAGCATG GTGCCGAGTAGGGACAAGTC
Downstream 100 bases:
>100_bases GGGACGGGAGGAGCAGCCAGGATGGATCTCGCCACCATACTGGGGATCGTGCTCGGTTTCGGCGCGCTCATTCTCGCCTT CGTCATGGAAGGCGGACATC
Product: flagellar FlbD family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 76; Mature: 76
Protein sequence:
>76_residues MITVTRLDGSRVVVNAELIEMVEAVPETVIVLVTRRRLMVREPVDEVIDRVLAYRRGLGGQPDAVRGLLPRAEHDD
Sequences:
>Translated_76_residues MITVTRLDGSRVVVNAELIEMVEAVPETVIVLVTRRRLMVREPVDEVIDRVLAYRRGLGGQPDAVRGLLPRAEHDD >Mature_76_residues MITVTRLDGSRVVVNAELIEMVEAVPETVIVLVTRRRLMVREPVDEVIDRVLAYRRGLGGQPDAVRGLLPRAEHDD
Specific function: Unknown
COG id: COG1582
COG function: function code N; Uncharacterized protein, possibly involved in motility
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8533; Mature: 8533
Theoretical pI: Translated: 5.09; Mature: 5.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MITVTRLDGSRVVVNAELIEMVEAVPETVIVLVTRRRLMVREPVDEVIDRVLAYRRGLGG CEEEEECCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCC QPDAVRGLLPRAEHDD CCHHHHHCCCCCCCCC >Mature Secondary Structure MITVTRLDGSRVVVNAELIEMVEAVPETVIVLVTRRRLMVREPVDEVIDRVLAYRRGLGG CEEEEECCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCC QPDAVRGLLPRAEHDD CCHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA