Definition Thermomicrobium roseum DSM 5159 plasmid unnamed, complete sequence.
Accession NC_011961
Length 917,738

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The map label for this gene is 221635439

Identifier: 221635439

GI number: 221635439

Start: 28768

End: 28998

Strand: Reverse

Name: 221635439

Synonym: trd_A0033

Alternate gene names: NA

Gene position: 28998-28768 (Counterclockwise)

Preceding gene: 221635460

Following gene: 221635438

Centisome position: 3.16

GC content: 66.23

Gene sequence:

>231_bases
ATGATCACGGTCACGCGGCTGGACGGAAGCCGGGTCGTCGTCAATGCCGAACTCATCGAAATGGTCGAGGCTGTGCCCGA
GACGGTCATCGTTCTCGTGACCCGGCGTCGCCTGATGGTCCGCGAGCCGGTCGATGAGGTCATCGACCGCGTGCTGGCCT
ATCGACGGGGGCTCGGCGGGCAACCGGACGCGGTGCGTGGCCTACTCCCTCGCGCTGAGCACGACGATTGA

Upstream 100 bases:

>100_bases
CAGGGTGTCTAGGACTTTTTGGCTGGCGAGCACGCTGGCTCGTTCTGCCGAAATGCTCAGTGCGGCACCACGCGAGCATG
GTGCCGAGTAGGGACAAGTC

Downstream 100 bases:

>100_bases
GGGACGGGAGGAGCAGCCAGGATGGATCTCGCCACCATACTGGGGATCGTGCTCGGTTTCGGCGCGCTCATTCTCGCCTT
CGTCATGGAAGGCGGACATC

Product: flagellar FlbD family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 76; Mature: 76

Protein sequence:

>76_residues
MITVTRLDGSRVVVNAELIEMVEAVPETVIVLVTRRRLMVREPVDEVIDRVLAYRRGLGGQPDAVRGLLPRAEHDD

Sequences:

>Translated_76_residues
MITVTRLDGSRVVVNAELIEMVEAVPETVIVLVTRRRLMVREPVDEVIDRVLAYRRGLGGQPDAVRGLLPRAEHDD
>Mature_76_residues
MITVTRLDGSRVVVNAELIEMVEAVPETVIVLVTRRRLMVREPVDEVIDRVLAYRRGLGGQPDAVRGLLPRAEHDD

Specific function: Unknown

COG id: COG1582

COG function: function code N; Uncharacterized protein, possibly involved in motility

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8533; Mature: 8533

Theoretical pI: Translated: 5.09; Mature: 5.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MITVTRLDGSRVVVNAELIEMVEAVPETVIVLVTRRRLMVREPVDEVIDRVLAYRRGLGG
CEEEEECCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCC
QPDAVRGLLPRAEHDD
CCHHHHHCCCCCCCCC
>Mature Secondary Structure
MITVTRLDGSRVVVNAELIEMVEAVPETVIVLVTRRRLMVREPVDEVIDRVLAYRRGLGG
CEEEEECCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCC
QPDAVRGLLPRAEHDD
CCHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA