| Definition | Thermomicrobium roseum DSM 5159 chromosome, complete genome. |
|---|---|
| Accession | NC_011959 |
| Length | 2,003,006 |
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The map label for this gene is pgsA
Identifier: 221633936
GI number: 221633936
Start: 1982741
End: 1983322
Strand: Reverse
Name: pgsA
Synonym: trd_1964
Alternate gene names: NA
Gene position: 1983322-1982741 (Counterclockwise)
Preceding gene: 221633937
Following gene: 221633935
Centisome position: 99.02
GC content: 65.98
Gene sequence:
>582_bases GTGCTCAGTTCACTGGTAGCCGACCGGGTCCGTCTCCGCTTGCAGCGAGTCGGCGAACTCGTCGGGCGAACTGGCCTCAC ACCCAACCAGTTGACGATGATCGGATTGTTCCTCAACGGGCTCGTCGGATGGGTCGCCGCGGAGGGAGCTTTTCGCTGGG CCGGTGGGCTCCTACTCCTCGCCGGGATCTTCGACATGCTGGATGGGGCAGTCGCCCGTGCCACCGGGCGCGTCACGCGC TTCGGCGGCATCCTCGATTCGGTTCTGGACCGCTACGCCGAGGCACTGGTCATCGGCGGACTCCTCGTCTGGTTCACCCG TTCCTCGGCGGGAACGGTGCCGGTTCTCCTCTGCTACGCCGTCATCGTCGGCTCCATTCTCGTGAGCTATGTCCGCGCGC GTGCTGAAGGTGCTGGTCTCCAGTTGACGCAGGGCTTTTTCGCCCGACCGGAACGCATCATCGTGCTGGCGCTCGGACTC TTAGCCGAGCGACCGATCTGGGCGCTCTGGCTCCTGGCCGTGGCGACCAACCTGACGGTGCTCCAGCGGCTCTGGCTGGT CCGACGCGCCTCTGGAGCATGA
Upstream 100 bases:
>100_bases ACTCTTGCGCGGTGTTCGCGAGACGACAACCGAACCACCGATCGATTGGTGGACCTCGCTCCGTCTCGCCTTGAAGGCAT GGTCAGGGAGGTAAGCTGCA
Downstream 100 bases:
>100_bases GTCTCATGCGCCGGATCATGCTGCTCCTTCTGCTTCTTGGGATCCTGACCGGCTGCCTGCCAGTCGGTCGTTCCCCTGCT GGCCCGACCAGCGAGATGAC
Product: CDP-diacylglycerol--glycerol-3-phosphate 3 -phosphatidyltransferase PgsA
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 193; Mature: 193
Protein sequence:
>193_residues MLSSLVADRVRLRLQRVGELVGRTGLTPNQLTMIGLFLNGLVGWVAAEGAFRWAGGLLLLAGIFDMLDGAVARATGRVTR FGGILDSVLDRYAEALVIGGLLVWFTRSSAGTVPVLLCYAVIVGSILVSYVRARAEGAGLQLTQGFFARPERIIVLALGL LAERPIWALWLLAVATNLTVLQRLWLVRRASGA
Sequences:
>Translated_193_residues MLSSLVADRVRLRLQRVGELVGRTGLTPNQLTMIGLFLNGLVGWVAAEGAFRWAGGLLLLAGIFDMLDGAVARATGRVTR FGGILDSVLDRYAEALVIGGLLVWFTRSSAGTVPVLLCYAVIVGSILVSYVRARAEGAGLQLTQGFFARPERIIVLALGL LAERPIWALWLLAVATNLTVLQRLWLVRRASGA >Mature_193_residues MLSSLVADRVRLRLQRVGELVGRTGLTPNQLTMIGLFLNGLVGWVAAEGAFRWAGGLLLLAGIFDMLDGAVARATGRVTR FGGILDSVLDRYAEALVIGGLLVWFTRSSAGTVPVLLCYAVIVGSILVSYVRARAEGAGLQLTQGFFARPERIIVLALGL LAERPIWALWLLAVATNLTVLQRLWLVRRASGA
Specific function: Unknown
COG id: COG0558
COG function: function code I; Phosphatidylglycerophosphate synthase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CDP-alcohol phosphatidyltransferase class-I family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000462 [H]
Pfam domain/function: PF01066 CDP-OH_P_transf [H]
EC number: NA
Molecular weight: Translated: 20741; Mature: 20741
Theoretical pI: Translated: 11.78; Mature: 11.78
Prosite motif: PS00379 CDP_ALCOHOL_P_TRANSF
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLSSLVADRVRLRLQRVGELVGRTGLTPNQLTMIGLFLNGLVGWVAAEGAFRWAGGLLLL CCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH AGIFDMLDGAVARATGRVTRFGGILDSVLDRYAEALVIGGLLVWFTRSSAGTVPVLLCYA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH VIVGSILVSYVRARAEGAGLQLTQGFFARPERIIVLALGLLAERPIWALWLLAVATNLTV HHHHHHHHHHHHHHHCCCCCEEHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH LQRLWLVRRASGA HHHHHHHHHCCCC >Mature Secondary Structure MLSSLVADRVRLRLQRVGELVGRTGLTPNQLTMIGLFLNGLVGWVAAEGAFRWAGGLLLL CCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH AGIFDMLDGAVARATGRVTRFGGILDSVLDRYAEALVIGGLLVWFTRSSAGTVPVLLCYA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH VIVGSILVSYVRARAEGAGLQLTQGFFARPERIIVLALGLLAERPIWALWLLAVATNLTV HHHHHHHHHHHHHHHCCCCCEEHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH LQRLWLVRRASGA HHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9679194 [H]