Definition Thermomicrobium roseum DSM 5159 chromosome, complete genome.
Accession NC_011959
Length 2,003,006

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The map label for this gene is 221633910

Identifier: 221633910

GI number: 221633910

Start: 1953996

End: 1954814

Strand: Reverse

Name: 221633910

Synonym: trd_1937

Alternate gene names: NA

Gene position: 1954814-1953996 (Counterclockwise)

Preceding gene: 221633911

Following gene: 221633909

Centisome position: 97.59

GC content: 66.06

Gene sequence:

>819_bases
ATGCCGCTCACGCTCAAGCGCACGACGCTCTTCATCGTGATCCTCCTCCTGGCCAGCACGGTGCTCGTGGTTCTCGACCG
CCAGCAGCGACTGGGCGGGATCACCGCTCCGCTGACCGGCCTGGTCACGGATGTCCAGCGCGGCATCGCACCAGTCTTCG
CGTCCCTTCCTGTTCCCGCCACAAGCTCCGAGCGCGAACTCCGTGCGGAAGTCGAGCGCTTGCGCGCGGAGCGAAACGCG
CTCCTCGCCGAGGTCGCCCGCCTGCGACAAGCGCAGCAGGAACTCGACCAGCTGCGCGCCCAGTTGCGTTTTCAGCAAGA
GCATCCTGGACTCCAGCTCGTCCCGGCACGCATCATCGGATTCGATCCGGAACGACCACAACGGGTCTTCGTCATCGATC
GAGGCAGCGAGGCAGGAATCCGCATCGGTATGGCAGTGCTGGATCCCAACGTCCTCGTGGGCATCGTGACACGGGTCGAG
CCTGACCGCTCCCAGGTGACCGCGGTGACCGACCCCTCCATCCAGCTCGGCGCGCAACTCTCGGAATCGGGCGCCGAAGG
GATCGTCTATGGCCAGGGCTGGCGAGGAAGCGGTTTGCTGATTCTCCGGCACCTTCCTCCGGACACGCCGTATCGAAACG
GCGAACTCGTCGTCACGTCGGGACGCACCGCCGGCATTCCGCCAGGTCTCGTCATCGGTGTGGTGATCGGCGGCTCGCGC
CAGGTCGCTGACGACGAGCTGCGCTTGACCGTCCGACCGCTCGTCGATATCCCATCGCTCCGCACAGCCAGCGTGCTGGT
GAGCAGTGCGACCCAGTAG

Upstream 100 bases:

>100_bases
CGTCGCGGAAGCGCTCCACCTCTACCAGCGCGCTCTGCAAGGGACGCAACAACGACGCGTACCGGCTGCTTCGAGCTCGA
CGACCTGACACGGATGAGGC

Downstream 100 bases:

>100_bases
ACTGGAGGCATGAACGTTTCGACGCTGCTCGCCATCGCAGCCGGTCGGCTGACAGTTCAGGCAACTCGCCGCCTGCGGCT
CGGCGGTGGCACGGCGCTTC

Product: rod shape-determining protein

Products: NA

Alternate protein names: Cell Shape-Determining Protein MreC; Rod Shape-Determining MreC Transmembrane Protein; Rod Shape-Determining Protein

Number of amino acids: Translated: 272; Mature: 271

Protein sequence:

>272_residues
MPLTLKRTTLFIVILLLASTVLVVLDRQQRLGGITAPLTGLVTDVQRGIAPVFASLPVPATSSERELRAEVERLRAERNA
LLAEVARLRQAQQELDQLRAQLRFQQEHPGLQLVPARIIGFDPERPQRVFVIDRGSEAGIRIGMAVLDPNVLVGIVTRVE
PDRSQVTAVTDPSIQLGAQLSESGAEGIVYGQGWRGSGLLILRHLPPDTPYRNGELVVTSGRTAGIPPGLVIGVVIGGSR
QVADDELRLTVRPLVDIPSLRTASVLVSSATQ

Sequences:

>Translated_272_residues
MPLTLKRTTLFIVILLLASTVLVVLDRQQRLGGITAPLTGLVTDVQRGIAPVFASLPVPATSSERELRAEVERLRAERNA
LLAEVARLRQAQQELDQLRAQLRFQQEHPGLQLVPARIIGFDPERPQRVFVIDRGSEAGIRIGMAVLDPNVLVGIVTRVE
PDRSQVTAVTDPSIQLGAQLSESGAEGIVYGQGWRGSGLLILRHLPPDTPYRNGELVVTSGRTAGIPPGLVIGVVIGGSR
QVADDELRLTVRPLVDIPSLRTASVLVSSATQ
>Mature_271_residues
PLTLKRTTLFIVILLLASTVLVVLDRQQRLGGITAPLTGLVTDVQRGIAPVFASLPVPATSSERELRAEVERLRAERNAL
LAEVARLRQAQQELDQLRAQLRFQQEHPGLQLVPARIIGFDPERPQRVFVIDRGSEAGIRIGMAVLDPNVLVGIVTRVEP
DRSQVTAVTDPSIQLGAQLSESGAEGIVYGQGWRGSGLLILRHLPPDTPYRNGELVVTSGRTAGIPPGLVIGVVIGGSRQ
VADDELRLTVRPLVDIPSLRTASVLVSSATQ

Specific function: Unknown

COG id: COG1792

COG function: function code M; Cell shape-determining protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29346; Mature: 29214

Theoretical pI: Translated: 9.96; Mature: 9.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
0.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
0.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPLTLKRTTLFIVILLLASTVLVVLDRQQRLGGITAPLTGLVTDVQRGIAPVFASLPVPA
CCCEEHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCC
TSSERELRAEVERLRAERNALLAEVARLRQAQQELDQLRAQLRFQQEHPGLQLVPARIIG
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCEEEC
FDPERPQRVFVIDRGSEAGIRIGMAVLDPNVLVGIVTRVEPDRSQVTAVTDPSIQLGAQL
CCCCCCCEEEEEECCCCCCEEEEEEEECCCEEEEEEEECCCCCCCEEEEECCCHHCCCCH
SESGAEGIVYGQGWRGSGLLILRHLPPDTPYRNGELVVTSGRTAGIPPGLVIGVVIGGSR
HCCCCCEEEEECCCCCCCEEEEEECCCCCCCCCCEEEEECCCCCCCCCCEEEEEEECCCC
QVADDELRLTVRPLVDIPSLRTASVLVSSATQ
CCCCCCEEEEEEECCCCCCCHHHHHHHHCCCC
>Mature Secondary Structure 
PLTLKRTTLFIVILLLASTVLVVLDRQQRLGGITAPLTGLVTDVQRGIAPVFASLPVPA
CCEEHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCC
TSSERELRAEVERLRAERNALLAEVARLRQAQQELDQLRAQLRFQQEHPGLQLVPARIIG
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCEEEC
FDPERPQRVFVIDRGSEAGIRIGMAVLDPNVLVGIVTRVEPDRSQVTAVTDPSIQLGAQL
CCCCCCCEEEEEECCCCCCEEEEEEEECCCEEEEEEEECCCCCCCEEEEECCCHHCCCCH
SESGAEGIVYGQGWRGSGLLILRHLPPDTPYRNGELVVTSGRTAGIPPGLVIGVVIGGSR
HCCCCCEEEEECCCCCCCEEEEEECCCCCCCCCCEEEEECCCCCCCCCCEEEEEEECCCC
QVADDELRLTVRPLVDIPSLRTASVLVSSATQ
CCCCCCEEEEEEECCCCCCCHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA