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The map label for this gene is 221633909

Identifier: 221633909

GI number: 221633909

Start: 1952607

End: 1953986

Strand: Reverse

Name: 221633909

Synonym: trd_1936

Alternate gene names: NA

Gene position: 1953986-1952607 (Counterclockwise)

Preceding gene: 221633910

Following gene: 221633908

Centisome position: 97.55

GC content: 67.17

Gene sequence:

>1380_bases
ATGAACGTTTCGACGCTGCTCGCCATCGCAGCCGGTCGGCTGACAGTTCAGGCAACTCGCCGCCTGCGGCTCGGCGGTGG
CACGGCGCTTCCGGGATTGCTCGCACTCCGCATCGCGCCGGATTTCCTGACTACGGCAGGTCGCGCGCTTCCGCAGGGGG
CAGTCCTCATCGCGGGAACCAACGGCAAGACGACGACTGCGCGGCTCCTGGCTGGAACACTCGAATCGGCCGGCTTGACG
ATCGTGCACAACCGGTCGGGGAGCAACCTGCCGCGTGGCATCGCTGCCACGTTGCTGGAAACGATCGACTGGTCAGGCAC
GGTCCACCGTGACCTAGGCATCTTCGAGGTCGACGAGTTCGCCCTTCCGGAGATCGCCCAGGCGCTGCGTCCTCGCCTGC
TCGTCCTGCTCAACCTGTTCCGCGACCAACTCGACCGGTACGGTGAACTGGAAACGATCGTCCGCGTCTGGGAACGCGCC
CTGGACTCGCTTCCACTGGAGACGCTCCTCGTGGTCGATGCTGATGACCCGATCCTCGCTGCGCTGACCGAGCGGTTCGC
GGATCGCCGCTGGACGTTCGGGCTCGCTGACCCCCGCATCGCCCTGCCTGCCCTGCCGCATGCTGCCGACTGGCGCTCTT
GCCCGCGGTGCGGTGCTCCGCTCGCGTACGAGCAGGTTTTTCTCGGCCATCTCGGTGCCTACCGCTGTACGGCTTGTCCG
TTCGCTCGTCCCCCACTGACTGTTGCGGGTCGCTGTGTGCGAACGGAGCACGGGCTACTCGCGGTCGAAGCGGTGTCCGA
CGAGCGGGAACTCGTCCTCCAGAGCCAGCTCACTGGCGTGTACAACGCCTACAACGTGCTGGCGGCGGCCACGGCGAGTC
TGGCTTTGGGGCTCGCACCCGAGCAACTCGCCGCGGGGCTCGCGGGAGTGACGGCAGCTTTTGGCCGACAAGAGCGCGTC
GAACTCGCGGGACGAACCGTCACCCTGCTGCTCGTCAAGAATCCGACCGGCTTCAACGAGGCGATCCGCCTGATCGCCGG
TGCTGCCCAGCCGCAGCCGGTCCTCATCCTGATCAACGATCTGGACGCGGATGGGCGAGACGTTTCCTGGCTCTGGGACG
TCGATCTCGAACCTTTGCAGGCACTCAGCGCACCAGTCAGTACCGGAGGCATCCGCAGCGCAGAGATGGCGCTCCGGCTC
GCCTACGCTGGGATCGCGCCAGCACACCAGTTCGCTGGCGTCGCGACCGCGCTGGATCGCTGGGTGGAAACGCTTCCACC
CGGCAGTGGCGGCTGGGTCCTGGCGACCTACACCGCGCTGCTGGAACTCCGGCGGGAACTCGCCCGACGGGGGCTGGCTC
GCGAGTTCTGGCGCCAGTGA

Upstream 100 bases:

>100_bases
TGACGACGAGCTGCGCTTGACCGTCCGACCGCTCGTCGATATCCCATCGCTCCGCACAGCCAGCGTGCTGGTGAGCAGTG
CGACCCAGTAGACTGGAGGC

Downstream 100 bases:

>100_bases
GGGAGCGACCGATGCACCTGACGATCGGCTGGCTCTACGCACGGACCATGAACATCTACGGTGATCGCGGGAACATCGTC
ACGCTCGTGGAACGCTGCCG

Product: hypothetical protein

Products: NA

Alternate protein names: Mur Ligase Family Protein; UDP-N-Acetylmuramyl Tripeptide Synthetase; Mur Ligase; Ligase; Mur Ligase Middle Domain Protein; Conserved Domain Protein; UDP-N-Acetylmuramyl Tripeptide Synthase-Like Protein; UDP-N-Acetylmuramoylalanine-D-Glutamate Ligase; UDP-N-Acetylmuramyl Tripeptide Synthetase MurC; Peptide Ligase; UDP-N-Acetylmuramyl Tripeptide Synthetase Like; UDP-N-Acetylmuramoyl-L-Alanyl-D-Glutamate-Lysine Ligase; Udp-N-Acetylmuramyl Tripeptide Synthetase; Cell Wall Biosynthesis Protein Mur Ligase Family; Mur Ligase Middle Domain-Containing Protein; UDP-N-Acetylmuramyl Peptide Synthetase

Number of amino acids: Translated: 459; Mature: 459

Protein sequence:

>459_residues
MNVSTLLAIAAGRLTVQATRRLRLGGGTALPGLLALRIAPDFLTTAGRALPQGAVLIAGTNGKTTTARLLAGTLESAGLT
IVHNRSGSNLPRGIAATLLETIDWSGTVHRDLGIFEVDEFALPEIAQALRPRLLVLLNLFRDQLDRYGELETIVRVWERA
LDSLPLETLLVVDADDPILAALTERFADRRWTFGLADPRIALPALPHAADWRSCPRCGAPLAYEQVFLGHLGAYRCTACP
FARPPLTVAGRCVRTEHGLLAVEAVSDERELVLQSQLTGVYNAYNVLAAATASLALGLAPEQLAAGLAGVTAAFGRQERV
ELAGRTVTLLLVKNPTGFNEAIRLIAGAAQPQPVLILINDLDADGRDVSWLWDVDLEPLQALSAPVSTGGIRSAEMALRL
AYAGIAPAHQFAGVATALDRWVETLPPGSGGWVLATYTALLELRRELARRGLAREFWRQ

Sequences:

>Translated_459_residues
MNVSTLLAIAAGRLTVQATRRLRLGGGTALPGLLALRIAPDFLTTAGRALPQGAVLIAGTNGKTTTARLLAGTLESAGLT
IVHNRSGSNLPRGIAATLLETIDWSGTVHRDLGIFEVDEFALPEIAQALRPRLLVLLNLFRDQLDRYGELETIVRVWERA
LDSLPLETLLVVDADDPILAALTERFADRRWTFGLADPRIALPALPHAADWRSCPRCGAPLAYEQVFLGHLGAYRCTACP
FARPPLTVAGRCVRTEHGLLAVEAVSDERELVLQSQLTGVYNAYNVLAAATASLALGLAPEQLAAGLAGVTAAFGRQERV
ELAGRTVTLLLVKNPTGFNEAIRLIAGAAQPQPVLILINDLDADGRDVSWLWDVDLEPLQALSAPVSTGGIRSAEMALRL
AYAGIAPAHQFAGVATALDRWVETLPPGSGGWVLATYTALLELRRELARRGLAREFWRQ
>Mature_459_residues
MNVSTLLAIAAGRLTVQATRRLRLGGGTALPGLLALRIAPDFLTTAGRALPQGAVLIAGTNGKTTTARLLAGTLESAGLT
IVHNRSGSNLPRGIAATLLETIDWSGTVHRDLGIFEVDEFALPEIAQALRPRLLVLLNLFRDQLDRYGELETIVRVWERA
LDSLPLETLLVVDADDPILAALTERFADRRWTFGLADPRIALPALPHAADWRSCPRCGAPLAYEQVFLGHLGAYRCTACP
FARPPLTVAGRCVRTEHGLLAVEAVSDERELVLQSQLTGVYNAYNVLAAATASLALGLAPEQLAAGLAGVTAAFGRQERV
ELAGRTVTLLLVKNPTGFNEAIRLIAGAAQPQPVLILINDLDADGRDVSWLWDVDLEPLQALSAPVSTGGIRSAEMALRL
AYAGIAPAHQFAGVATALDRWVETLPPGSGGWVLATYTALLELRRELARRGLAREFWRQ

Specific function: Unknown

COG id: COG0769

COG function: function code M; UDP-N-acetylmuramyl tripeptide synthase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 49212; Mature: 49212

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNVSTLLAIAAGRLTVQATRRLRLGGGTALPGLLALRIAPDFLTTAGRALPQGAVLIAGT
CCHHHHHHHHHCCEEEEEHHEEECCCCCCCHHHHHHHHCCHHHHHHCCCCCCCCEEEECC
NGKTTTARLLAGTLESAGLTIVHNRSGSNLPRGIAATLLETIDWSGTVHRDLGIFEVDEF
CCCCHHHHHHHHHHHHCCEEEEECCCCCCCCHHHHHHHHHHHCCCCEEECCCCCEEECHH
ALPEIAQALRPRLLVLLNLFRDQLDRYGELETIVRVWERALDSLPLETLLVVDADDPILA
HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCEEEEEEECCCHHHH
ALTERFADRRWTFGLADPRIALPALPHAADWRSCPRCGAPLAYEQVFLGHLGAYRCTACP
HHHHHHHCCCEEECCCCCCEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHCCCCC
FARPPLTVAGRCVRTEHGLLAVEAVSDERELVLQSQLTGVYNAYNVLAAATASLALGLAP
CCCCCHHHCCEEEECCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
EQLAAGLAGVTAAFGRQERVELAGRTVTLLLVKNPTGFNEAIRLIAGAAQPQPVLILIND
HHHHHHHHHHHHHHCCHHHHHHCCCEEEEEEEECCCCHHHHHHHHHCCCCCCCEEEEEEC
LDADGRDVSWLWDVDLEPLQALSAPVSTGGIRSAEMALRLAYAGIAPAHQFAGVATALDR
CCCCCCCEEEEECCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHH
WVETLPPGSGGWVLATYTALLELRRELARRGLAREFWRQ
HHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHCC
>Mature Secondary Structure
MNVSTLLAIAAGRLTVQATRRLRLGGGTALPGLLALRIAPDFLTTAGRALPQGAVLIAGT
CCHHHHHHHHHCCEEEEEHHEEECCCCCCCHHHHHHHHCCHHHHHHCCCCCCCCEEEECC
NGKTTTARLLAGTLESAGLTIVHNRSGSNLPRGIAATLLETIDWSGTVHRDLGIFEVDEF
CCCCHHHHHHHHHHHHCCEEEEECCCCCCCCHHHHHHHHHHHCCCCEEECCCCCEEECHH
ALPEIAQALRPRLLVLLNLFRDQLDRYGELETIVRVWERALDSLPLETLLVVDADDPILA
HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCEEEEEEECCCHHHH
ALTERFADRRWTFGLADPRIALPALPHAADWRSCPRCGAPLAYEQVFLGHLGAYRCTACP
HHHHHHHCCCEEECCCCCCEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHCCCCC
FARPPLTVAGRCVRTEHGLLAVEAVSDERELVLQSQLTGVYNAYNVLAAATASLALGLAP
CCCCCHHHCCEEEECCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
EQLAAGLAGVTAAFGRQERVELAGRTVTLLLVKNPTGFNEAIRLIAGAAQPQPVLILIND
HHHHHHHHHHHHHHCCHHHHHHCCCEEEEEEEECCCCHHHHHHHHHCCCCCCCEEEEEEC
LDADGRDVSWLWDVDLEPLQALSAPVSTGGIRSAEMALRLAYAGIAPAHQFAGVATALDR
CCCCCCCEEEEECCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHH
WVETLPPGSGGWVLATYTALLELRRELARRGLAREFWRQ
HHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA