Definition Thermomicrobium roseum DSM 5159 chromosome, complete genome.
Accession NC_011959
Length 2,003,006

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The map label for this gene is 221633887

Identifier: 221633887

GI number: 221633887

Start: 1924166

End: 1924633

Strand: Reverse

Name: 221633887

Synonym: trd_1913

Alternate gene names: NA

Gene position: 1924633-1924166 (Counterclockwise)

Preceding gene: 221633888

Following gene: 221633885

Centisome position: 96.09

GC content: 65.6

Gene sequence:

>468_bases
ATGCTCCACCCCTATCAGGAACTGATCGATCTCCTCGCCGAGACACCGCGCCGGTTGACCGCCCTGCTCGAGCAGGCCGG
TTCCGATGGAGAAGGCCAGCGTGCGCAGCTGGCGCGTGTCGTGGCGCATCTGGCCGCAGTGGAATCCCTGATGCGGGAGC
GGATCCTGCGCATGGTCGCGCAGGACACCCCCTACTTCCGGGCTGTCGATCTGAGTGCGCTGGCGGAAACGACGACCTCG
CTGCGCGAGGCGCTCGACAAACTAGGACACGAGCGCGGAGACACCTTGACCACGCTCATGACGCTCTCCCTCAAGGACTG
GGAGCGACCGGCTATCCACGAGCGGCTCGGCCAGGTCACGGTCGAAGACCTGGTCGAGCAACTGGTCGAACACGACCGGC
TCCATCTCGAGCAGGTCGAACGACTCCTCGCCGGTCAGGAGGTGAGTTGGCCACCCGAGCCGAGTTGA

Upstream 100 bases:

>100_bases
ACTCGTTCGTCTTCCGCGACCCGTTCGGTCTCACCTGGCACGTGACCGATCTGCCGGCCAGCGAGCCGCCGCACTGAGCC
GGTGCACGAAGGAGCCGCCC

Downstream 100 bases:

>100_bases
CGGCCGGGCGCCGCTGCCTCGACGAGCGCTAGCACCTCATCCAGCCGGTCACCGGCCGTGATCGCGCGGACGACCGTCTC
GTCCAGAACCGTCTCCCAGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 155; Mature: 155

Protein sequence:

>155_residues
MLHPYQELIDLLAETPRRLTALLEQAGSDGEGQRAQLARVVAHLAAVESLMRERILRMVAQDTPYFRAVDLSALAETTTS
LREALDKLGHERGDTLTTLMTLSLKDWERPAIHERLGQVTVEDLVEQLVEHDRLHLEQVERLLAGQEVSWPPEPS

Sequences:

>Translated_155_residues
MLHPYQELIDLLAETPRRLTALLEQAGSDGEGQRAQLARVVAHLAAVESLMRERILRMVAQDTPYFRAVDLSALAETTTS
LREALDKLGHERGDTLTTLMTLSLKDWERPAIHERLGQVTVEDLVEQLVEHDRLHLEQVERLLAGQEVSWPPEPS
>Mature_155_residues
MLHPYQELIDLLAETPRRLTALLEQAGSDGEGQRAQLARVVAHLAAVESLMRERILRMVAQDTPYFRAVDLSALAETTTS
LREALDKLGHERGDTLTTLMTLSLKDWERPAIHERLGQVTVEDLVEQLVEHDRLHLEQVERLLAGQEVSWPPEPS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17520; Mature: 17520

Theoretical pI: Translated: 4.68; Mature: 4.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLHPYQELIDLLAETPRRLTALLEQAGSDGEGQRAQLARVVAHLAAVESLMRERILRMVA
CCCHHHHHHHHHHHCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QDTPYFRAVDLSALAETTTSLREALDKLGHERGDTLTTLMTLSLKDWERPAIHERLGQVT
HCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHCCH
VEDLVEQLVEHDRLHLEQVERLLAGQEVSWPPEPS
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MLHPYQELIDLLAETPRRLTALLEQAGSDGEGQRAQLARVVAHLAAVESLMRERILRMVA
CCCHHHHHHHHHHHCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QDTPYFRAVDLSALAETTTSLREALDKLGHERGDTLTTLMTLSLKDWERPAIHERLGQVT
HCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHCCH
VEDLVEQLVEHDRLHLEQVERLLAGQEVSWPPEPS
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA