| Definition | Thermomicrobium roseum DSM 5159 chromosome, complete genome. |
|---|---|
| Accession | NC_011959 |
| Length | 2,003,006 |
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The map label for this gene is 221633888
Identifier: 221633888
GI number: 221633888
Start: 1924657
End: 1925214
Strand: Reverse
Name: 221633888
Synonym: trd_1915
Alternate gene names: NA
Gene position: 1925214-1924657 (Counterclockwise)
Preceding gene: 221633889
Following gene: 221633887
Centisome position: 96.12
GC content: 68.46
Gene sequence:
>558_bases ATGAGCGAGGCACTGAAACCGGTACACGCGGAACTGGTGCCGGCTCCACCGGGAAGCGGGCGCTTGCCGTTCGCGCTGCC GGATCCCGGAACCGAGCCGCTCCTGCCTGCACCCCGCACGCTCCGCCTCGAAGCGCTTCAGCATATCGCCATCCGCGTGG CCGATCTGCCAGCAGCGGAGCGGTTCTACCGCGAGTTCTTCGGCATGGAAGTCGTCTGGCGCGTGCGGCGAGCGGGTCAG GGCTGGGAGTATCTGCCAGCCGACTTCGACTGGGGCACTGCTCTGCGGACCGGCATCGTGCCGGAGTATGTCCTGCTCCG CAACGGGCCACTCCAGCTCTTGCTCCAGTTCGCTGGTCGCGGCACGGTCTTCGTCGAGCCCCGGCTCGTGCATCTGAGCC TGCGCGTCGCCCCCGAAACGCTCCTGGAACTCCGCGCCGAAGTGCTGGTCCGAGGGTACGCCGTCGCCGAGAGCGGGGAA CACTCGTTCGTCTTCCGCGACCCGTTCGGTCTCACCTGGCACGTGACCGATCTGCCGGCCAGCGAGCCGCCGCACTGA
Upstream 100 bases:
>100_bases AGGCCAGAGGGACGCTCTACGAGGTGCAACTCGGCCTGCTCGGAACGCAGGCGCTCGCGACGCTGGGGTGGTACCGCTAG CTGCTGGGGAGGATCGCCGC
Downstream 100 bases:
>100_bases GCCGGTGCACGAAGGAGCCGCCCATGCTCCACCCCTATCAGGAACTGATCGATCTCCTCGCCGAGACACCGCGCCGGTTG ACCGCCCTGCTCGAGCAGGC
Product: glyoxalase family protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 185; Mature: 184
Protein sequence:
>185_residues MSEALKPVHAELVPAPPGSGRLPFALPDPGTEPLLPAPRTLRLEALQHIAIRVADLPAAERFYREFFGMEVVWRVRRAGQ GWEYLPADFDWGTALRTGIVPEYVLLRNGPLQLLLQFAGRGTVFVEPRLVHLSLRVAPETLLELRAEVLVRGYAVAESGE HSFVFRDPFGLTWHVTDLPASEPPH
Sequences:
>Translated_185_residues MSEALKPVHAELVPAPPGSGRLPFALPDPGTEPLLPAPRTLRLEALQHIAIRVADLPAAERFYREFFGMEVVWRVRRAGQ GWEYLPADFDWGTALRTGIVPEYVLLRNGPLQLLLQFAGRGTVFVEPRLVHLSLRVAPETLLELRAEVLVRGYAVAESGE HSFVFRDPFGLTWHVTDLPASEPPH >Mature_184_residues SEALKPVHAELVPAPPGSGRLPFALPDPGTEPLLPAPRTLRLEALQHIAIRVADLPAAERFYREFFGMEVVWRVRRAGQG WEYLPADFDWGTALRTGIVPEYVLLRNGPLQLLLQFAGRGTVFVEPRLVHLSLRVAPETLLELRAEVLVRGYAVAESGEH SFVFRDPFGLTWHVTDLPASEPPH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20642; Mature: 20511
Theoretical pI: Translated: 6.24; Mature: 6.24
Prosite motif: PS00934 GLYOXALASE_I_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 0.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEALKPVHAELVPAPPGSGRLPFALPDPGTEPLLPAPRTLRLEALQHIAIRVADLPAAE CCCCCCCCHHEEECCCCCCCCCCEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHH RFYREFFGMEVVWRVRRAGQGWEYLPADFDWGTALRTGIVPEYVLLRNGPLQLLLQFAGR HHHHHHHCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHCCCCCEEEECCCHHHHHHHHHCC GTVFVEPRLVHLSLRVAPETLLELRAEVLVRGYAVAESGEHSFVFRDPFGLTWHVTDLPA CEEEECCEEEEEEEEECHHHHHHHHHHHHHHHHEEECCCCCEEEEECCCCCEEEEECCCC SEPPH CCCCC >Mature Secondary Structure SEALKPVHAELVPAPPGSGRLPFALPDPGTEPLLPAPRTLRLEALQHIAIRVADLPAAE CCCCCCCHHEEECCCCCCCCCCEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHH RFYREFFGMEVVWRVRRAGQGWEYLPADFDWGTALRTGIVPEYVLLRNGPLQLLLQFAGR HHHHHHHCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHCCCCCEEEECCCHHHHHHHHHCC GTVFVEPRLVHLSLRVAPETLLELRAEVLVRGYAVAESGEHSFVFRDPFGLTWHVTDLPA CEEEECCEEEEEEEEECHHHHHHHHHHHHHHHHEEECCCCCEEEEECCCCCEEEEECCCC SEPPH CCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA