Definition Thermomicrobium roseum DSM 5159 chromosome, complete genome.
Accession NC_011959
Length 2,003,006

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The map label for this gene is 221633855

Identifier: 221633855

GI number: 221633855

Start: 1892039

End: 1892650

Strand: Reverse

Name: 221633855

Synonym: trd_1882

Alternate gene names: NA

Gene position: 1892650-1892039 (Counterclockwise)

Preceding gene: 221633856

Following gene: 221633854

Centisome position: 94.49

GC content: 68.63

Gene sequence:

>612_bases
ATGCCCAGGATCCTGCGCCGTCCCCGTTCTCCAACCGAACGCCACCAGCGAGCCGCCGAGTGGGCCCGCTGGTTCACTGG
CGACAGCAGCATCGCCGCTTATCGGCGAGAACTCGCGCAGCTGACTGGACTCGGTGCCGATCTCGCCTGGGAACTCGTCA
GCGATCTGGCACCGCTCCTGCTCGAGCGCGTTCCGGCGAAACTGGGTGCCCAAGTCCTCTTGGCCACCGTCACGCTCGCA
GCAGCACAGCCCAAGCCGCGAGAGGCCGGCTGGGCGCTGCTGGCGACCGTCACCGAAGAACTCACCCCAGCGCATGCCCG
TACCGTGCTCGAAACACTGGCCTTGGGCTGGCAGGCGAGCTCCACCGCGCTCACGAGCACGCAGCGCCGTCAGGCGATCG
AGCGTGAACTCCGACGCGTGATCCGTCGACTCGCTGCCAGTGGCGCCGCTGGCCTCGATGCGCTCGTTGCGGTCGTCGCT
GTCCTGGGCATCTCGGAGGGAGACGACAGCGCTATACTGGAGAGCATCGAGGGGCCTCACCGGGAGCAGGGCCAGGAGGG
AGCGGCCCAGCCACCGCAGCCCGGGACAGGGAAGGCGGAGGACGAACGATGA

Upstream 100 bases:

>100_bases
GGCCTGGTCTGCAGCCTCGCGCTCCTCTTCGCAACGAGGGCAGTGCGCCGTGCCGCTCTGACGCCGAGCACGACCATGCT
TTCTGCTGGCTGACCGACGG

Downstream 100 bases:

>100_bases
GCGCGCAGGTTTGGCTCGGTCTCGTGTTCCTCGTGCTCATCGTGATCTGGATCATCGAACTCGTCTGGATCGCTCGTTCG
GCGGAAAGCTGGGGACACGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 203; Mature: 202

Protein sequence:

>203_residues
MPRILRRPRSPTERHQRAAEWARWFTGDSSIAAYRRELAQLTGLGADLAWELVSDLAPLLLERVPAKLGAQVLLATVTLA
AAQPKPREAGWALLATVTEELTPAHARTVLETLALGWQASSTALTSTQRRQAIERELRRVIRRLAASGAAGLDALVAVVA
VLGISEGDDSAILESIEGPHREQGQEGAAQPPQPGTGKAEDER

Sequences:

>Translated_203_residues
MPRILRRPRSPTERHQRAAEWARWFTGDSSIAAYRRELAQLTGLGADLAWELVSDLAPLLLERVPAKLGAQVLLATVTLA
AAQPKPREAGWALLATVTEELTPAHARTVLETLALGWQASSTALTSTQRRQAIERELRRVIRRLAASGAAGLDALVAVVA
VLGISEGDDSAILESIEGPHREQGQEGAAQPPQPGTGKAEDER
>Mature_202_residues
PRILRRPRSPTERHQRAAEWARWFTGDSSIAAYRRELAQLTGLGADLAWELVSDLAPLLLERVPAKLGAQVLLATVTLAA
AQPKPREAGWALLATVTEELTPAHARTVLETLALGWQASSTALTSTQRRQAIERELRRVIRRLAASGAAGLDALVAVVAV
LGISEGDDSAILESIEGPHREQGQEGAAQPPQPGTGKAEDER

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21826; Mature: 21695

Theoretical pI: Translated: 6.82; Mature: 6.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
0.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPRILRRPRSPTERHQRAAEWARWFTGDSSIAAYRRELAQLTGLGADLAWELVSDLAPLL
CCCHHCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
LERVPAKLGAQVLLATVTLAAAQPKPREAGWALLATVTEELTPAHARTVLETLALGWQAS
HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCC
STALTSTQRRQAIERELRRVIRRLAASGAAGLDALVAVVAVLGISEGDDSAILESIEGPH
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHCCCC
REQGQEGAAQPPQPGTGKAEDER
HHCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
PRILRRPRSPTERHQRAAEWARWFTGDSSIAAYRRELAQLTGLGADLAWELVSDLAPLL
CCHHCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
LERVPAKLGAQVLLATVTLAAAQPKPREAGWALLATVTEELTPAHARTVLETLALGWQAS
HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCC
STALTSTQRRQAIERELRRVIRRLAASGAAGLDALVAVVAVLGISEGDDSAILESIEGPH
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHCCCC
REQGQEGAAQPPQPGTGKAEDER
HHCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA