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The map label for this gene is yajR [C]

Identifier: 221633856

GI number: 221633856

Start: 1892658

End: 1893857

Strand: Reverse

Name: yajR [C]

Synonym: trd_1883

Alternate gene names: 221633856

Gene position: 1893857-1892658 (Counterclockwise)

Preceding gene: 221633858

Following gene: 221633855

Centisome position: 94.55

GC content: 65.08

Gene sequence:

>1200_bases
ATGGGAGACGACGTCGTCATGGAAACGGCGGCCACCCGAGCAACGGCGTGGCGGCTCTTTGCCGGATCACTCTTCAACGA
GGGAGCGATCGGCTTCTTCTTTACGCTCTGGCCTCTCTACATCGCGTCGCTCGGCGCGTCACCAGCCGAAATCGGGTTGG
TCATCGGTGCGTCCGGCGTCTTGCGCCTGCTTTTCCTGCTCCCCTCCAGCTGGCTCGTCGATCGGTTTTCGCTGCGGCTT
CTGGTGGCTGGGATGCGCGCCGTCGCCGCGCTCGGCTTCATCCTCTGCGCACTCGTCCGCGAATGGTGGCAACTCTTCCC
GGGACTGATCGCCATCAATGCTGGTGTCATCGCCTTTCCAGCGCTGAGCACGCTCATCGCTGGTCTCGGCCGAGCGAGCG
AGGAGCGCACCCGCTATTTCACGATGATCTACACCGTCGCTCCTTCGATCGCCACGATCCTGACTCCGGCCGCCGCTGGC
TGGTTGGCGGAGCGCTGGGGACTGCGTGCAACGCTCGTCGCTGCCAGTCTCGCCACGGCTGCTGCCGCGGCCACCTTCGC
GACCGTGCGTGTCCCCGAGCACGCGACTGCCTCGACAGCCGGTGGATCGTATCGAGAACTCCTGTATCGCCGCTCGATCC
TTCTTTCAGCCGGGCTCATGGTGGCGACGATCGGCGGCATGATGCTCGGTTGGGTCCTCGCGCCGAACTACCTTCAGGAG
GTCCATGGGGTCAGTCTCGAACGGATCGGCTGGCTCGGCTCGATCGCTGCCTGCGGGAGCACGCTCTTGAGCATCGGTGT
CCATCGCAACCGCTGGCTGCAAGACCCGTTCAATACGCTCCTGGTGGCGACGGGAGCGGTGGCAGCAGGCTTTGCGCTCA
TCCTGCTCGGGCGCGATTTCGGCGTCTTTGTCGTCGCCTACCTCCTGCGTGGAGGGTTTCTGGTCGCTTGGTCGGCATTT
TATTCGGTCTTCGGAATCATCACACCGGAGCACTTGCGCTCGCGCGTGTTCGCGCTGGCTGAGATCCTCGGCGGCCTCGG
CACGACGGTCGCCCCGTTCCTCGCTGGGTTCCTCTACGAACTCGATCCACGCTTGCCGCTCGCGGCCGGCCTGGTCTGCA
GCCTCGCGCTCCTCTTCGCAACGAGGGCAGTGCGCCGTGCCGCTCTGACGCCGAGCACGACCATGCTTTCTGCTGGCTGA

Upstream 100 bases:

>100_bases
GCCGGCGTGCTCCGATCCGGCAGCGGACACCGCTGCGAGGCGGCGCTTGCTCGCGCCTGACCACGTCTCCGTATACTACC
GCGGATAGGCTGGGGGCGGG

Downstream 100 bases:

>100_bases
CCGACGGATGCCCAGGATCCTGCGCCGTCCCCGTTCTCCAACCGAACGCCACCAGCGAGCCGCCGAGTGGGCCCGCTGGT
TCACTGGCGACAGCAGCATC

Product: putative multidrug-efflux transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 399; Mature: 398

Protein sequence:

>399_residues
MGDDVVMETAATRATAWRLFAGSLFNEGAIGFFFTLWPLYIASLGASPAEIGLVIGASGVLRLLFLLPSSWLVDRFSLRL
LVAGMRAVAALGFILCALVREWWQLFPGLIAINAGVIAFPALSTLIAGLGRASEERTRYFTMIYTVAPSIATILTPAAAG
WLAERWGLRATLVAASLATAAAAATFATVRVPEHATASTAGGSYRELLYRRSILLSAGLMVATIGGMMLGWVLAPNYLQE
VHGVSLERIGWLGSIAACGSTLLSIGVHRNRWLQDPFNTLLVATGAVAAGFALILLGRDFGVFVVAYLLRGGFLVAWSAF
YSVFGIITPEHLRSRVFALAEILGGLGTTVAPFLAGFLYELDPRLPLAAGLVCSLALLFATRAVRRAALTPSTTMLSAG

Sequences:

>Translated_399_residues
MGDDVVMETAATRATAWRLFAGSLFNEGAIGFFFTLWPLYIASLGASPAEIGLVIGASGVLRLLFLLPSSWLVDRFSLRL
LVAGMRAVAALGFILCALVREWWQLFPGLIAINAGVIAFPALSTLIAGLGRASEERTRYFTMIYTVAPSIATILTPAAAG
WLAERWGLRATLVAASLATAAAAATFATVRVPEHATASTAGGSYRELLYRRSILLSAGLMVATIGGMMLGWVLAPNYLQE
VHGVSLERIGWLGSIAACGSTLLSIGVHRNRWLQDPFNTLLVATGAVAAGFALILLGRDFGVFVVAYLLRGGFLVAWSAF
YSVFGIITPEHLRSRVFALAEILGGLGTTVAPFLAGFLYELDPRLPLAAGLVCSLALLFATRAVRRAALTPSTTMLSAG
>Mature_398_residues
GDDVVMETAATRATAWRLFAGSLFNEGAIGFFFTLWPLYIASLGASPAEIGLVIGASGVLRLLFLLPSSWLVDRFSLRLL
VAGMRAVAALGFILCALVREWWQLFPGLIAINAGVIAFPALSTLIAGLGRASEERTRYFTMIYTVAPSIATILTPAAAGW
LAERWGLRATLVAASLATAAAAATFATVRVPEHATASTAGGSYRELLYRRSILLSAGLMVATIGGMMLGWVLAPNYLQEV
HGVSLERIGWLGSIAACGSTLLSIGVHRNRWLQDPFNTLLVATGAVAAGFALILLGRDFGVFVVAYLLRGGFLVAWSAFY
SVFGIITPEHLRSRVFALAEILGGLGTTVAPFLAGFLYELDPRLPLAAGLVCSLALLFATRAVRRAALTPSTTMLSAG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42257; Mature: 42126

Theoretical pI: Translated: 9.83; Mature: 9.83

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGDDVVMETAATRATAWRLFAGSLFNEGAIGFFFTLWPLYIASLGASPAEIGLVIGASGV
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHEEEECHHHH
LRLLFLLPSSWLVDRFSLRLLVAGMRAVAALGFILCALVREWWQLFPGLIAINAGVIAFP
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCHHHHH
ALSTLIAGLGRASEERTRYFTMIYTVAPSIATILTPAAAGWLAERWGLRATLVAASLATA
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
AAAATFATVRVPEHATASTAGGSYRELLYRRSILLSAGLMVATIGGMMLGWVLAPNYLQE
HHHHHHHEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHH
VHGVSLERIGWLGSIAACGSTLLSIGVHRNRWLQDPFNTLLVATGAVAAGFALILLGRDF
HHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCH
GVFVVAYLLRGGFLVAWSAFYSVFGIITPEHLRSRVFALAEILGGLGTTVAPFLAGFLYE
HHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
LDPRLPLAAGLVCSLALLFATRAVRRAALTPSTTMLSAG
CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure 
GDDVVMETAATRATAWRLFAGSLFNEGAIGFFFTLWPLYIASLGASPAEIGLVIGASGV
CCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHEEEECHHHH
LRLLFLLPSSWLVDRFSLRLLVAGMRAVAALGFILCALVREWWQLFPGLIAINAGVIAFP
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCHHHHH
ALSTLIAGLGRASEERTRYFTMIYTVAPSIATILTPAAAGWLAERWGLRATLVAASLATA
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
AAAATFATVRVPEHATASTAGGSYRELLYRRSILLSAGLMVATIGGMMLGWVLAPNYLQE
HHHHHHHEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHH
VHGVSLERIGWLGSIAACGSTLLSIGVHRNRWLQDPFNTLLVATGAVAAGFALILLGRDF
HHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCH
GVFVVAYLLRGGFLVAWSAFYSVFGIITPEHLRSRVFALAEILGGLGTTVAPFLAGFLYE
HHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
LDPRLPLAAGLVCSLALLFATRAVRRAALTPSTTMLSAG
CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA