| Definition | Thermomicrobium roseum DSM 5159 chromosome, complete genome. |
|---|---|
| Accession | NC_011959 |
| Length | 2,003,006 |
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The map label for this gene is 221633807
Identifier: 221633807
GI number: 221633807
Start: 1844019
End: 1844393
Strand: Reverse
Name: 221633807
Synonym: trd_1834
Alternate gene names: NA
Gene position: 1844393-1844019 (Counterclockwise)
Preceding gene: 221633808
Following gene: 221633806
Centisome position: 92.08
GC content: 66.4
Gene sequence:
>375_bases ATGACTGCCTTACCATTCATCGTCCTGATCGAGCCGGACTGGCCGGCACGCTCCTATTTCCGCGCGGAACTCGAGGAACT CGGCTACGCCGTGAGCGCGCACGAGCGCGCCGCTGACGCAGCACACTTTCTCGCTGGCTGGGGATTGCGCCCCGACCTGA TCGTGGTGGACCTCGCGAGTGATGGTGAGCAGCTCGCCGAACTCCAGCGCCTGCTCGAAGACTTCCCTGACACGCGACTC CTCGTCCTGGCGAGCCCCCTGCGCGCCCTGCCGGAATGGCTGCGCCAGCGCGCGAACCGGATCCTCTCCCGCCCCTTCGC AGTCAGCGACGTGGTGCGCGTCGTCAGCGAACTCGCCCCGTTAATCGACCGTTAA
Upstream 100 bases:
>100_bases TGTCCGGATGGCAGAGCGGTCGCTCGTCCTACCTCGAGCGGCCGCTCTCGTCCGTTCACGAGACAGTTGCGTACTGTCTC GCGAGAGCAGGAGCGAGGCG
Downstream 100 bases:
>100_bases TCTCCCGCTGATCCTCCGTTAATCGCAGCCCGGTACACTGCCCACAGTGAAGGGAAGACGGATGGTCACGGTGAGCAGTC GATCGACCACGCGACCAGAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 124; Mature: 123
Protein sequence:
>124_residues MTALPFIVLIEPDWPARSYFRAELEELGYAVSAHERAADAAHFLAGWGLRPDLIVVDLASDGEQLAELQRLLEDFPDTRL LVLASPLRALPEWLRQRANRILSRPFAVSDVVRVVSELAPLIDR
Sequences:
>Translated_124_residues MTALPFIVLIEPDWPARSYFRAELEELGYAVSAHERAADAAHFLAGWGLRPDLIVVDLASDGEQLAELQRLLEDFPDTRL LVLASPLRALPEWLRQRANRILSRPFAVSDVVRVVSELAPLIDR >Mature_123_residues TALPFIVLIEPDWPARSYFRAELEELGYAVSAHERAADAAHFLAGWGLRPDLIVVDLASDGEQLAELQRLLEDFPDTRLL VLASPLRALPEWLRQRANRILSRPFAVSDVVRVVSELAPLIDR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13956; Mature: 13825
Theoretical pI: Translated: 4.60; Mature: 4.60
Prosite motif: PS50110 RESPONSE_REGULATORY
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 0.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTALPFIVLIEPDWPARSYFRAELEELGYAVSAHERAADAAHFLAGWGLRPDLIVVDLAS CCCCCEEEEECCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCEEEEECCC DGEQLAELQRLLEDFPDTRLLVLASPLRALPEWLRQRANRILSRPFAVSDVVRVVSELAP CCHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH LIDR HHCC >Mature Secondary Structure TALPFIVLIEPDWPARSYFRAELEELGYAVSAHERAADAAHFLAGWGLRPDLIVVDLAS CCCCEEEEECCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCEEEEECCC DGEQLAELQRLLEDFPDTRLLVLASPLRALPEWLRQRANRILSRPFAVSDVVRVVSELAP CCHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH LIDR HHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA