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The map label for this gene is ftsY [H]

Identifier: 221633792

GI number: 221633792

Start: 1828083

End: 1829045

Strand: Reverse

Name: ftsY [H]

Synonym: trd_1819

Alternate gene names: 221633792

Gene position: 1829045-1828083 (Counterclockwise)

Preceding gene: 221633795

Following gene: 221633791

Centisome position: 91.32

GC content: 63.55

Gene sequence:

>963_bases
GTGATCTTCAGTCGTTTTTTCCGCCGGCGGACCCCGCCCAGCCCACAACTGGAATCGGGCTTGAAGCGTAGCCGGCAGGG
AATCTTTCGCCAGATCGTTCAGCTTTTCGAGCGGTCGCAAATCGACCGCGAGCTCTTCGATGACTTGGAAGCGTTGCTCA
TTCAGGCCGACCTGGGTGTGGCGACCACCGAAGCCTTGCTGGAACGACTCCAGGAGCGCGTGCGACGTGGCGAGGTCCGC
GACCCGGTCGAGGCACGCGAGGCGCTGCGTGAGGAGATGGTCGCTCTGCTCGAGGCAGCGATGCGCAACCGCCGGGTCAA
GATCTACCAGCGCGGGGTTCCGTTCGTCTCTCTGGTCGTCGGCGTCAATGGGACCGGAAAGACAACGACGATCGCCAAGT
TGGCCCGGTATCACCTGGATCAGGGGCGGACGGTCCTGCTCGTCGCGGCCGATACCTTCCGCGCAGCCGCGATCGATCAA
CTCAAGGCGTGGGGCGAACGGCTCGGTGTGCCGGTCATCGCACACGCACCCGGCGCGGATCCAGGTGCCGTCGTGTTCGA
TGGCATGCAGGCAGCTCACAATCGGGGCATCGATGTCTTGCTGATCGATACTGCTGGCCGACTGCACACGAAGTCGAATC
TGATGGCGGAACTGGCCAAGATCCGACGCGTCATCCAGCGACATGTGCCGGACGCCCCGCATGAGGTGCTGCTCGTCATC
GACGCGACGACTGGGCAAAATGGCCTCAACCAGGCCCGGGTCTTCACGGAAGCAGCTGGCGTGACGGACATCGCGCTGAC
CAAGCTGGATGGGACGGCCAAAGGCGGGATCGCCTTCGCCATCGCGCGCGAACTCGGCATCCCGATCGCCTACGTAGGGA
CTGGTGAGAAGCCAACGGACTTTGCCGAATTCGATCCGGAAGCCTACGTCGACGCCCTGTTCTTCGGGGACGAGGAGGAC
TGA

Upstream 100 bases:

>100_bases
AAAGAGCCAGCGCGGCACGACTGCTATACTTAGCGATGGCGCCGCGGCAGTCGCTGCGGCGCCACACTCCAGGGAAGTAT
CCCGGAACGAGGAGACGAGC

Downstream 100 bases:

>100_bases
CCATGTTCGAGGCGCTGACGGACCGCTTGACCCAGGTCTTCCAACGCATCGGTCGCAAGGGGCGCCTCACCGAAGAGGAC
GTCGACGAGGCACTACGTGA

Product: signal recognition particle-docking protein FtsY

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 320; Mature: 320

Protein sequence:

>320_residues
MIFSRFFRRRTPPSPQLESGLKRSRQGIFRQIVQLFERSQIDRELFDDLEALLIQADLGVATTEALLERLQERVRRGEVR
DPVEAREALREEMVALLEAAMRNRRVKIYQRGVPFVSLVVGVNGTGKTTTIAKLARYHLDQGRTVLLVAADTFRAAAIDQ
LKAWGERLGVPVIAHAPGADPGAVVFDGMQAAHNRGIDVLLIDTAGRLHTKSNLMAELAKIRRVIQRHVPDAPHEVLLVI
DATTGQNGLNQARVFTEAAGVTDIALTKLDGTAKGGIAFAIARELGIPIAYVGTGEKPTDFAEFDPEAYVDALFFGDEED

Sequences:

>Translated_320_residues
MIFSRFFRRRTPPSPQLESGLKRSRQGIFRQIVQLFERSQIDRELFDDLEALLIQADLGVATTEALLERLQERVRRGEVR
DPVEAREALREEMVALLEAAMRNRRVKIYQRGVPFVSLVVGVNGTGKTTTIAKLARYHLDQGRTVLLVAADTFRAAAIDQ
LKAWGERLGVPVIAHAPGADPGAVVFDGMQAAHNRGIDVLLIDTAGRLHTKSNLMAELAKIRRVIQRHVPDAPHEVLLVI
DATTGQNGLNQARVFTEAAGVTDIALTKLDGTAKGGIAFAIARELGIPIAYVGTGEKPTDFAEFDPEAYVDALFFGDEED
>Mature_320_residues
MIFSRFFRRRTPPSPQLESGLKRSRQGIFRQIVQLFERSQIDRELFDDLEALLIQADLGVATTEALLERLQERVRRGEVR
DPVEAREALREEMVALLEAAMRNRRVKIYQRGVPFVSLVVGVNGTGKTTTIAKLARYHLDQGRTVLLVAADTFRAAAIDQ
LKAWGERLGVPVIAHAPGADPGAVVFDGMQAAHNRGIDVLLIDTAGRLHTKSNLMAELAKIRRVIQRHVPDAPHEVLLVI
DATTGQNGLNQARVFTEAAGVTDIALTKLDGTAKGGIAFAIARELGIPIAYVGTGEKPTDFAEFDPEAYVDALFFGDEED

Specific function: Required for normal cell growth and morphogenesis; translocation of at least 1 protein is impaired in its absence [H]

COG id: COG0552

COG function: function code U; Signal recognition particle GTPase

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GTP-binding SRP family [H]

Homologues:

Organism=Homo sapiens, GI4507215, Length=274, Percent_Identity=31.021897810219, Blast_Score=139, Evalue=3e-33,
Organism=Homo sapiens, GI226371618, Length=237, Percent_Identity=33.3333333333333, Blast_Score=134, Evalue=1e-31,
Organism=Homo sapiens, GI23308697, Length=338, Percent_Identity=29.2899408284024, Blast_Score=120, Evalue=1e-27,
Organism=Homo sapiens, GI295424842, Length=338, Percent_Identity=29.2899408284024, Blast_Score=120, Evalue=1e-27,
Organism=Homo sapiens, GI89061728, Length=141, Percent_Identity=31.9148936170213, Blast_Score=81, Evalue=1e-15,
Organism=Escherichia coli, GI1789874, Length=298, Percent_Identity=48.6577181208054, Blast_Score=263, Evalue=1e-71,
Organism=Escherichia coli, GI1788963, Length=260, Percent_Identity=34.6153846153846, Blast_Score=143, Evalue=2e-35,
Organism=Caenorhabditis elegans, GI17539958, Length=283, Percent_Identity=28.9752650176678, Blast_Score=134, Evalue=5e-32,
Organism=Caenorhabditis elegans, GI193206261, Length=274, Percent_Identity=31.021897810219, Blast_Score=107, Evalue=9e-24,
Organism=Saccharomyces cerevisiae, GI6325345, Length=204, Percent_Identity=36.7647058823529, Blast_Score=142, Evalue=1e-34,
Organism=Drosophila melanogaster, GI17647949, Length=284, Percent_Identity=30.2816901408451, Blast_Score=131, Evalue=6e-31,
Organism=Drosophila melanogaster, GI24641198, Length=262, Percent_Identity=29.7709923664122, Blast_Score=107, Evalue=7e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004390
- InterPro:   IPR003593
- InterPro:   IPR000897
- InterPro:   IPR013822 [H]

Pfam domain/function: PF00448 SRP54; PF02881 SRP54_N [H]

EC number: NA

Molecular weight: Translated: 35213; Mature: 35213

Theoretical pI: Translated: 6.54; Mature: 6.54

Prosite motif: PS00300 SRP54

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIFSRFFRRRTPPSPQLESGLKRSRQGIFRQIVQLFERSQIDRELFDDLEALLIQADLGV
CCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
ATTEALLERLQERVRRGEVRDPVEAREALREEMVALLEAAMRNRRVKIYQRGVPFVSLVV
HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCEEEEEE
GVNGTGKTTTIAKLARYHLDQGRTVLLVAADTFRAAAIDQLKAWGERLGVPVIAHAPGAD
ECCCCCCHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHCCCCEEEECCCCC
PGAVVFDGMQAAHNRGIDVLLIDTAGRLHTKSNLMAELAKIRRVIQRHVPDAPHEVLLVI
CCCEEECCHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEE
DATTGQNGLNQARVFTEAAGVTDIALTKLDGTAKGGIAFAIARELGIPIAYVGTGEKPTD
ECCCCCCCCHHHHHHHHHCCCHHHEEEECCCCCCCCHHHHHHHHHCCCEEEECCCCCCCC
FAEFDPEAYVDALFFGDEED
HHHCCHHHHHHHHCCCCCCC
>Mature Secondary Structure
MIFSRFFRRRTPPSPQLESGLKRSRQGIFRQIVQLFERSQIDRELFDDLEALLIQADLGV
CCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
ATTEALLERLQERVRRGEVRDPVEAREALREEMVALLEAAMRNRRVKIYQRGVPFVSLVV
HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCEEEEEE
GVNGTGKTTTIAKLARYHLDQGRTVLLVAADTFRAAAIDQLKAWGERLGVPVIAHAPGAD
ECCCCCCHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHCCCCEEEECCCCC
PGAVVFDGMQAAHNRGIDVLLIDTAGRLHTKSNLMAELAKIRRVIQRHVPDAPHEVLLVI
CCCEEECCHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEE
DATTGQNGLNQARVFTEAAGVTDIALTKLDGTAKGGIAFAIARELGIPIAYVGTGEKPTD
ECCCCCCCCHHHHHHHHHCCCHHHEEEECCCCCCCCHHHHHHHHHCCCEEEECCCCCCCC
FAEFDPEAYVDALFFGDEED
HHHCCHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7584053; 9384377; 8654983 [H]