The gene/protein map for NC_011959 is currently unavailable.
Definition Thermomicrobium roseum DSM 5159 chromosome, complete genome.
Accession NC_011959
Length 2,003,006

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The map label for this gene is 221633693

Identifier: 221633693

GI number: 221633693

Start: 1725593

End: 1727245

Strand: Reverse

Name: 221633693

Synonym: trd_1720

Alternate gene names: NA

Gene position: 1727245-1725593 (Counterclockwise)

Preceding gene: 221633694

Following gene: 221633692

Centisome position: 86.23

GC content: 65.52

Gene sequence:

>1653_bases
ATGCACAGTGCTGTGGCGATCTCCTGCAACCAGGGGATGACGCGGATCGTGCTGGCCGACCGCGTCGAGGGTGAGCCACG
ACTGCTCGGAACGGTGGCGGTTCCTGGCCGGGACGTCGAGACCGGATTGGCGTTCGCCGAAGAGCGCTTCGGTCGCCGAT
TGCTCGCCGAGGAGCGCCCGATCCGTCCGCGTGGCCTGCTGGGAGACGGCGCCGACGCCTGGATCGCGGTCGGTAGTCCG
GCGAGCGTTCCGCTCCTCGCAGTGCTGGCCATCGCACTGGACCCGTTGCTGACAGACCTCGCCAAGCGTGCTGCCGAAGC
AGCCATGGTCGAGACCCACTGGATCGACGCCACGCAAGTAGCAAGCCTGACGGCGCTGGTGCAACAGCTCGTGGAACTGC
GTCCTCGCTTTCTCCTGCTGACGGGGGGATCCGATGAGTCTGCCTGGCAGTCGGCCATGGTGGCAGTGAGCAACGCGCTC
GGCGACGCATTTGACCTCGAAGTCGGTATCGTCATCGCGCCGGAAGCGATCCAGCAGCTCGTGGCGAAGACGATCGGCGA
TCAGGTCGAACTCATGGGTGTCGATCCGACCACCTCCCAGCCAGCTGAGGTCGTCCGCGCGGTGACGAGCGAGTTTCGCT
CCCGGGTGGCAACGCTGCTGTCAGCGGAGTTGAAAGCACTGGAACTGGATCGCTTCGTCGATCGTGCCACGGCATTGGAG
CGTGCGCTTGCCTTTCTCGTCCGGCGTGCTGATCAGCGTGTCGCTCTCGTCGATCTCGAGCAGGGGATGCTCGGTATCTG
GGCGCGTTCCGAGGGGATGTTGACGCTCTATCGAGCTGGGCGTGACCTCGAGCAGGGGGCGCTCGGACTGGCAGCACTCG
GTCCCGAGACGATCGCGCGCTGGCTTCCTTTTCCGATGACCGAAGAAGACATCCTCGACTGGCTCGCCAATCGCGTCATG
ACGGCGTCTCCTTTCCTTTTCGAGTGGCGTGACCAACTCATCGCGACTGCGGCGGTGCGAGCGCTCGTGCAGGATCTGGC
GAGCGCAGGGCCACCGAGCGGAATGCGCGAGGATCTCACGCTCGTCGTACTCGGACCACGTCTGGCTTGGCTTCCTGCGG
AACTCGCATTGCTGTGCGCGCTCGATGGGTTCGCGCCACTTCCGGCTGGCGGGCTCGTCAGTGTCGCGCTCGACGAGGCG
GATCTCCTGGCGACGTGCGGTGCGCTCGCTGAAATCGATCCGGGATACGCGGCGACACTCCTGGAGCGGGATGCGCTCTT
CCCGTTGGCTCATGTCATCGTTGTGGCTGGTGATGCCATGGAGGGAGCGATCGCCGTCCGCGGCGAGGTTCGTGCGGGTG
ATCTGGTGCACCGCTTCGCGGTGCCCTGGGGGAGTTTGCACGTCCTACCGTTTCCTTCTGGCCGTTCAGCGGAACTTCTC
GTGGAGCCGGAAGCAGGTATTCGTATCGGGTGTCTCGAGCCAGGGGTCGCGATCGAGTTCGCTGGCGAGGCAGCGCTCGG
TTGGACGCGTCTCGGAATCGTGATCGACGCGCGAGGACGCCCCTTGCGGTTACCGGACGATCCGCCAGTTCGCGCTCGGC
GGATCCGTTCCTGGCTGGCTGACCTCGGTGTGGCGGAGGGGGTGATGCGGTGA

Upstream 100 bases:

>100_bases
AATCGCTCTGTTCCTGGCACTGGCAGTCTTGATCGGTGTGGTCTTGTACATCTTGTGGCAGAGCCGGTAGCGCGCCCGGG
AGGTAGTGAGGAGAGCGCGC

Downstream 100 bases:

>100_bases
GCGCTCTCGGGCGCCTGCCCTTGGTCGCGCAAGATGTGGAGTGCCTCGTGCGACATCGCTTGGCTGCACCGGAACTGCGC
GTCGCTGTTGGGCAACTGGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 550; Mature: 550

Protein sequence:

>550_residues
MHSAVAISCNQGMTRIVLADRVEGEPRLLGTVAVPGRDVETGLAFAEERFGRRLLAEERPIRPRGLLGDGADAWIAVGSP
ASVPLLAVLAIALDPLLTDLAKRAAEAAMVETHWIDATQVASLTALVQQLVELRPRFLLLTGGSDESAWQSAMVAVSNAL
GDAFDLEVGIVIAPEAIQQLVAKTIGDQVELMGVDPTTSQPAEVVRAVTSEFRSRVATLLSAELKALELDRFVDRATALE
RALAFLVRRADQRVALVDLEQGMLGIWARSEGMLTLYRAGRDLEQGALGLAALGPETIARWLPFPMTEEDILDWLANRVM
TASPFLFEWRDQLIATAAVRALVQDLASAGPPSGMREDLTLVVLGPRLAWLPAELALLCALDGFAPLPAGGLVSVALDEA
DLLATCGALAEIDPGYAATLLERDALFPLAHVIVVAGDAMEGAIAVRGEVRAGDLVHRFAVPWGSLHVLPFPSGRSAELL
VEPEAGIRIGCLEPGVAIEFAGEAALGWTRLGIVIDARGRPLRLPDDPPVRARRIRSWLADLGVAEGVMR

Sequences:

>Translated_550_residues
MHSAVAISCNQGMTRIVLADRVEGEPRLLGTVAVPGRDVETGLAFAEERFGRRLLAEERPIRPRGLLGDGADAWIAVGSP
ASVPLLAVLAIALDPLLTDLAKRAAEAAMVETHWIDATQVASLTALVQQLVELRPRFLLLTGGSDESAWQSAMVAVSNAL
GDAFDLEVGIVIAPEAIQQLVAKTIGDQVELMGVDPTTSQPAEVVRAVTSEFRSRVATLLSAELKALELDRFVDRATALE
RALAFLVRRADQRVALVDLEQGMLGIWARSEGMLTLYRAGRDLEQGALGLAALGPETIARWLPFPMTEEDILDWLANRVM
TASPFLFEWRDQLIATAAVRALVQDLASAGPPSGMREDLTLVVLGPRLAWLPAELALLCALDGFAPLPAGGLVSVALDEA
DLLATCGALAEIDPGYAATLLERDALFPLAHVIVVAGDAMEGAIAVRGEVRAGDLVHRFAVPWGSLHVLPFPSGRSAELL
VEPEAGIRIGCLEPGVAIEFAGEAALGWTRLGIVIDARGRPLRLPDDPPVRARRIRSWLADLGVAEGVMR
>Mature_550_residues
MHSAVAISCNQGMTRIVLADRVEGEPRLLGTVAVPGRDVETGLAFAEERFGRRLLAEERPIRPRGLLGDGADAWIAVGSP
ASVPLLAVLAIALDPLLTDLAKRAAEAAMVETHWIDATQVASLTALVQQLVELRPRFLLLTGGSDESAWQSAMVAVSNAL
GDAFDLEVGIVIAPEAIQQLVAKTIGDQVELMGVDPTTSQPAEVVRAVTSEFRSRVATLLSAELKALELDRFVDRATALE
RALAFLVRRADQRVALVDLEQGMLGIWARSEGMLTLYRAGRDLEQGALGLAALGPETIARWLPFPMTEEDILDWLANRVM
TASPFLFEWRDQLIATAAVRALVQDLASAGPPSGMREDLTLVVLGPRLAWLPAELALLCALDGFAPLPAGGLVSVALDEA
DLLATCGALAEIDPGYAATLLERDALFPLAHVIVVAGDAMEGAIAVRGEVRAGDLVHRFAVPWGSLHVLPFPSGRSAELL
VEPEAGIRIGCLEPGVAIEFAGEAALGWTRLGIVIDARGRPLRLPDDPPVRARRIRSWLADLGVAEGVMR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 58654; Mature: 58654

Theoretical pI: Translated: 4.47; Mature: 4.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHSAVAISCNQGMTRIVLADRVEGEPRLLGTVAVPGRDVETGLAFAEERFGRRLLAEERP
CCCEEEEECCCCCEEEEEEECCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCC
IRPRGLLGDGADAWIAVGSPASVPLLAVLAIALDPLLTDLAKRAAEAAMVETHWIDATQV
CCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
ASLTALVQQLVELRPRFLLLTGGSDESAWQSAMVAVSNALGDAFDLEVGIVIAPEAIQQL
HHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHCCCCEEEEEEEEECHHHHHHH
VAKTIGDQVELMGVDPTTSQPAEVVRAVTSEFRSRVATLLSAELKALELDRFVDRATALE
HHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RALAFLVRRADQRVALVDLEQGMLGIWARSEGMLTLYRAGRDLEQGALGLAALGPETIAR
HHHHHHHHHCCCCEEEEEECCCCEEEEECCCCCEEEEECCCCHHHCCCEEECCCHHHHHH
WLPFPMTEEDILDWLANRVMTASPFLFEWRDQLIATAAVRALVQDLASAGPPSGMREDLT
HCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEE
LVVLGPRLAWLPAELALLCALDGFAPLPAGGLVSVALDEADLLATCGALAEIDPGYAATL
EEEECCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCHHHHHHHHHHHHCCCCHHHHH
LERDALFPLAHVIVVAGDAMEGAIAVRGEVRAGDLVHRFAVPWGSLHVLPFPSGRSAELL
HHHHHHHHHHHHHHEECCCCCCCEEEECCCCCCHHHHHHHCCCCCEEEEECCCCCCCEEE
VEPEAGIRIGCLEPGVAIEFAGEAALGWTRLGIVIDARGRPLRLPDDPPVRARRIRSWLA
ECCCCCEEEEECCCCCEEEECCCCCCCEEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHH
DLGVAEGVMR
HHHHHHHCCC
>Mature Secondary Structure
MHSAVAISCNQGMTRIVLADRVEGEPRLLGTVAVPGRDVETGLAFAEERFGRRLLAEERP
CCCEEEEECCCCCEEEEEEECCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCC
IRPRGLLGDGADAWIAVGSPASVPLLAVLAIALDPLLTDLAKRAAEAAMVETHWIDATQV
CCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
ASLTALVQQLVELRPRFLLLTGGSDESAWQSAMVAVSNALGDAFDLEVGIVIAPEAIQQL
HHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHCCCCEEEEEEEEECHHHHHHH
VAKTIGDQVELMGVDPTTSQPAEVVRAVTSEFRSRVATLLSAELKALELDRFVDRATALE
HHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RALAFLVRRADQRVALVDLEQGMLGIWARSEGMLTLYRAGRDLEQGALGLAALGPETIAR
HHHHHHHHHCCCCEEEEEECCCCEEEEECCCCCEEEEECCCCHHHCCCEEECCCHHHHHH
WLPFPMTEEDILDWLANRVMTASPFLFEWRDQLIATAAVRALVQDLASAGPPSGMREDLT
HCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEE
LVVLGPRLAWLPAELALLCALDGFAPLPAGGLVSVALDEADLLATCGALAEIDPGYAATL
EEEECCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCHHHHHHHHHHHHCCCCHHHHH
LERDALFPLAHVIVVAGDAMEGAIAVRGEVRAGDLVHRFAVPWGSLHVLPFPSGRSAELL
HHHHHHHHHHHHHHEECCCCCCCEEEECCCCCCHHHHHHHCCCCCEEEEECCCCCCCEEE
VEPEAGIRIGCLEPGVAIEFAGEAALGWTRLGIVIDARGRPLRLPDDPPVRARRIRSWLA
ECCCCCEEEEECCCCCEEEECCCCCCCEEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHH
DLGVAEGVMR
HHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA