The gene/protein map for NC_008600 is currently unavailable.
Definition Thermomicrobium roseum DSM 5159 chromosome, complete genome.
Accession NC_011959
Length 2,003,006

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The map label for this gene is yjjG [C]

Identifier: 221633637

GI number: 221633637

Start: 1660263

End: 1661018

Strand: Reverse

Name: yjjG [C]

Synonym: trd_1663

Alternate gene names: 221633637

Gene position: 1661018-1660263 (Counterclockwise)

Preceding gene: 221633639

Following gene: 221633636

Centisome position: 82.93

GC content: 66.8

Gene sequence:

>756_bases
ATGCCGATCCGGCTGGTCCTGTTCGATCTCGACGATACCCTGTGCGATCACCGGGGCTCGTTCCGTCTCCGGGTAGAGAC
GGCGCTGGCTGCTCTTCCCGACGAGGTACTGTCCCTGGAACGCGACGTGATCGTGGCGCTGGCGCTGGCCCAGCCGAGCC
ACACCTGGGAGGGAGTGCAGCGGGCACTGGAGATGGCCGGATGCACCGATCCCGCGTGGCTGGAGCGCGCGTCGGCGGTG
TATGCGCGCGACCGGTTCTTGGGGCTTTCGCTCTTTCCGGACAGCGTGACGGCTGTCAGGGCGATCCAGCGTCGCGCTTT
GACCGGACTCGTGACGAACGGACCGAGCGCGATTCAGCGGGCCAAGCTGGCCCGGCTGGGAATCGAGCGGTTGTTCCCGA
TCGTCGTCGTCTCCGAGGAGATCGGTGTGGCCAAGCCGGACCCGGCGATCTTCCAGTATGCGCTCCGGCTGGCGGGTGTG
CGTCCGGAAGAGGCGCTGTACGTGGGCGATCATCCGGTCAACGACGTGGCTGGAGCACAGCGTGCTGGGCTCACCAGTGT
CTGGTGCAACCGGTACGGCCAAGCCTGGCAGGGGGATGTGGAGCCGCACTTCGGGGTGGCTTCGCTGTGGGAGCTCTATC
GGGAATTGGAGGAATGGGCGAGCAGCGGGAGAGCGCTTTTCCCCGGGGGTATACTCGGTGAGAAACGGGGAGCGGCGCGT
TCGCGAGGAGGCGACGATGACCGTAGCGACGGGTGA

Upstream 100 bases:

>100_bases
ACTCCACCGTCCTCGTAGAGAGGATAACCGCTCACCCGTAGCCTGCTCGCTGGTCGATCCTGCTCTGACCGCGTAGGCTT
GGGTGGGGTAGATGAGCAGC

Downstream 100 bases:

>100_bases
GAAGCGAATCGTCCTCGCGGAAGTCATGGGTTACTGTTGGGGTGTGCGCCGAGCGTTGGAGATCATCCAGCAGGCTGCCC
AAGCTGGCCCGATCGCGACG

Product: hydrolase, HAD superfamily

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 251; Mature: 250

Protein sequence:

>251_residues
MPIRLVLFDLDDTLCDHRGSFRLRVETALAALPDEVLSLERDVIVALALAQPSHTWEGVQRALEMAGCTDPAWLERASAV
YARDRFLGLSLFPDSVTAVRAIQRRALTGLVTNGPSAIQRAKLARLGIERLFPIVVVSEEIGVAKPDPAIFQYALRLAGV
RPEEALYVGDHPVNDVAGAQRAGLTSVWCNRYGQAWQGDVEPHFGVASLWELYRELEEWASSGRALFPGGILGEKRGAAR
SRGGDDDRSDG

Sequences:

>Translated_251_residues
MPIRLVLFDLDDTLCDHRGSFRLRVETALAALPDEVLSLERDVIVALALAQPSHTWEGVQRALEMAGCTDPAWLERASAV
YARDRFLGLSLFPDSVTAVRAIQRRALTGLVTNGPSAIQRAKLARLGIERLFPIVVVSEEIGVAKPDPAIFQYALRLAGV
RPEEALYVGDHPVNDVAGAQRAGLTSVWCNRYGQAWQGDVEPHFGVASLWELYRELEEWASSGRALFPGGILGEKRGAAR
SRGGDDDRSDG
>Mature_250_residues
PIRLVLFDLDDTLCDHRGSFRLRVETALAALPDEVLSLERDVIVALALAQPSHTWEGVQRALEMAGCTDPAWLERASAVY
ARDRFLGLSLFPDSVTAVRAIQRRALTGLVTNGPSAIQRAKLARLGIERLFPIVVVSEEIGVAKPDPAIFQYALRLAGVR
PEEALYVGDHPVNDVAGAQRAGLTSVWCNRYGQAWQGDVEPHFGVASLWELYRELEEWASSGRALFPGGILGEKRGAARS
RGGDDDRSDG

Specific function: Unknown

COG id: COG1011

COG function: function code R; Predicted hydrolase (HAD superfamily)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the HAD-like hydrolase superfamily [H]

Homologues:

Organism=Homo sapiens, GI23308749, Length=230, Percent_Identity=27.8260869565217, Blast_Score=79, Evalue=6e-15,
Organism=Escherichia coli, GI1790833, Length=127, Percent_Identity=40.1574803149606, Blast_Score=90, Evalue=1e-19,
Organism=Escherichia coli, GI1789787, Length=215, Percent_Identity=31.1627906976744, Blast_Score=65, Evalue=6e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005834
- InterPro:   IPR023214
- InterPro:   IPR011950
- InterPro:   IPR006439
- InterPro:   IPR006402
- InterPro:   IPR005833 [H]

Pfam domain/function: PF00702 Hydrolase [H]

EC number: NA

Molecular weight: Translated: 27429; Mature: 27298

Theoretical pI: Translated: 5.18; Mature: 5.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPIRLVLFDLDDTLCDHRGSFRLRVETALAALPDEVLSLERDVIVALALAQPSHTWEGVQ
CCEEEEEECCCHHHHCCCCCEEEEHHHHHHHCCHHHHHHHHHHHEEEEECCCCHHHHHHH
RALEMAGCTDPAWLERASAVYARDRFLGLSLFPDSVTAVRAIQRRALTGLVTNGPSAIQR
HHHHHHCCCCHHHHHHHHHHHHHHHHEEEEECCCHHHHHHHHHHHHHHHHHCCCHHHHHH
AKLARLGIERLFPIVVVSEEIGVAKPDPAIFQYALRLAGVRPEEALYVGDHPVNDVAGAQ
HHHHHHHHHHHHHEEEEECCCCCCCCCHHHHHHHHHHCCCCCCCEEEECCCCCHHHCCHH
RAGLTSVWCNRYGQAWQGDVEPHFGVASLWELYRELEEWASSGRALFPGGILGEKRGAAR
HCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCCC
SRGGDDDRSDG
CCCCCCCCCCC
>Mature Secondary Structure 
PIRLVLFDLDDTLCDHRGSFRLRVETALAALPDEVLSLERDVIVALALAQPSHTWEGVQ
CEEEEEECCCHHHHCCCCCEEEEHHHHHHHCCHHHHHHHHHHHEEEEECCCCHHHHHHH
RALEMAGCTDPAWLERASAVYARDRFLGLSLFPDSVTAVRAIQRRALTGLVTNGPSAIQR
HHHHHHCCCCHHHHHHHHHHHHHHHHEEEEECCCHHHHHHHHHHHHHHHHHCCCHHHHHH
AKLARLGIERLFPIVVVSEEIGVAKPDPAIFQYALRLAGVRPEEALYVGDHPVNDVAGAQ
HHHHHHHHHHHHHEEEEECCCCCCCCCHHHHHHHHHHCCCCCCCEEEECCCCCHHHCCHH
RAGLTSVWCNRYGQAWQGDVEPHFGVASLWELYRELEEWASSGRALFPGGILGEKRGAAR
HCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCCC
SRGGDDDRSDG
CCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11930014 [H]