| Definition | Thermomicrobium roseum DSM 5159 chromosome, complete genome. |
|---|---|
| Accession | NC_011959 |
| Length | 2,003,006 |
Click here to switch to the map view.
The map label for this gene is 221633565
Identifier: 221633565
GI number: 221633565
Start: 1579259
End: 1579462
Strand: Reverse
Name: 221633565
Synonym: trd_1589
Alternate gene names: NA
Gene position: 1579462-1579259 (Counterclockwise)
Preceding gene: 221633567
Following gene: 221633564
Centisome position: 78.85
GC content: 77.45
Gene sequence:
>204_bases GTGCAGCCGGCCGGGCGAGGCGCCGGTGGCCCCGAGAGGGTAGACCGGCACATCGCCGGTGCGGCGCGTGTCCGCCACCG GTCGGCGCACCCGCCCCCGCCATGTAGGGGTCAGGCGCTGCCTGACCCGCCGGCCCGGCAGGGCCGGCCGACCATCCCGT CGCCGTTCGTGCGGTGTGCCATTGCAGTCACCGCGTGCCGGTGA
Upstream 100 bases:
>100_bases GGCTGCCCACCGCGCGGTTCCCCCCGCCACCAGTGTAGACGACGGCGCGGGTGGCCGGCGCACCCAACCGCGTCGTCGCG ATCAGCGCAGGGCGCCCGGC
Downstream 100 bases:
>100_bases GTGCCGCGGGTTGCCGCGCCCATGGCGCGCACGGGCGAGGCAGCGCCTCGCCCCTACACGGGTGGGGCAATGCATCTCCG GTCGGGCACAAGGGCGCCAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 67; Mature: 67
Protein sequence:
>67_residues MQPAGRGAGGPERVDRHIAGAARVRHRSAHPPPPCRGQALPDPPARQGRPTIPSPFVRCAIAVTACR
Sequences:
>Translated_67_residues MQPAGRGAGGPERVDRHIAGAARVRHRSAHPPPPCRGQALPDPPARQGRPTIPSPFVRCAIAVTACR >Mature_67_residues MQPAGRGAGGPERVDRHIAGAARVRHRSAHPPPPCRGQALPDPPARQGRPTIPSPFVRCAIAVTACR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7051; Mature: 7051
Theoretical pI: Translated: 12.26; Mature: 12.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 4.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQPAGRGAGGPERVDRHIAGAARVRHRSAHPPPPCRGQALPDPPARQGRPTIPSPFVRCA CCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH IAVTACR HHHHCCC >Mature Secondary Structure MQPAGRGAGGPERVDRHIAGAARVRHRSAHPPPPCRGQALPDPPARQGRPTIPSPFVRCA CCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH IAVTACR HHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA