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The map label for this gene is 221633489

Identifier: 221633489

GI number: 221633489

Start: 1491306

End: 1491971

Strand: Reverse

Name: 221633489

Synonym: trd_1511

Alternate gene names: NA

Gene position: 1491971-1491306 (Counterclockwise)

Preceding gene: 221633490

Following gene: 221633488

Centisome position: 74.49

GC content: 66.22

Gene sequence:

>666_bases
ATGGACGGTGTCGGAACCATTGTCGACACAAGCGAGATCCAATTGGATCCGGCACGAGCCTTACCGCGTGACTGGTTCGC
GCGTCCGGCGGTCGAGGTCGCTCGCGATCTCCTCGGCGCAATCCTGGTGAGCATGGTCGGCGGCGAGTTGGTCGCTGGAG
TGCTCGTCGAGGTCGAGGCCTATGGCGGGCCGGAGGACCCTGCTTCGCACGCGGCCCGCTACCGGAACGGACCGGCTCGG
GTCATGTGGGGACCACCGGGCCATGCCTACGTCTATCGGGCCTATGGCGTTTACCCATGCTGCAACATCGTCACCGATCC
GGACGGTACAGCCGGAGCTGTCTTGCTCCGTGCCGCCATGCCGCTGGCTGGCCACGCGATCATGCGGCAACGCCGGGAGC
GATCGCGTCACGCCGGATACCGATTGGCTGAGCACCGGCTGGCGAGCGGGCCGGGAGCGCTCGCTCAGGCGTTCGGGATT
ATGCTCGATCATCACGGGTTGCCGATCGATCGACCGCCGTTCTGGATTCAGTCTGGCTCATCGCCGCAGCGTGTCGCGAG
CACGCCACGCATCGGGATCTCGCGCGGTCAGGAGTTCCTGTGGCGGTTCGTGATTCCCGGACATCCGGCAGTCTCTGGGC
GTACTCCGCGCCTCGTGACGGAGTAG

Upstream 100 bases:

>100_bases
TCGGTGCTGAGCAGTCGGGCGAGAGCACAGCCAGAAGACCACGGCTCGCCGCGAGGGTAGCGAACATCTTGGCCGGAGGG
GAAGCACGCACGAGTGACTG

Downstream 100 bases:

>100_bases
ACTGGAGAGAGCAGGACCAGGCGATCCTGCTGGACCGGACCGTTTCATGTGGAGTTTCCCGGCTTTGCAACTGGTCAGTT
TCGCGCTGGTGGTTCTCTCG

Product: putative 3-methyladenine DNA glycosylase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 221; Mature: 221

Protein sequence:

>221_residues
MDGVGTIVDTSEIQLDPARALPRDWFARPAVEVARDLLGAILVSMVGGELVAGVLVEVEAYGGPEDPASHAARYRNGPAR
VMWGPPGHAYVYRAYGVYPCCNIVTDPDGTAGAVLLRAAMPLAGHAIMRQRRERSRHAGYRLAEHRLASGPGALAQAFGI
MLDHHGLPIDRPPFWIQSGSSPQRVASTPRIGISRGQEFLWRFVIPGHPAVSGRTPRLVTE

Sequences:

>Translated_221_residues
MDGVGTIVDTSEIQLDPARALPRDWFARPAVEVARDLLGAILVSMVGGELVAGVLVEVEAYGGPEDPASHAARYRNGPAR
VMWGPPGHAYVYRAYGVYPCCNIVTDPDGTAGAVLLRAAMPLAGHAIMRQRRERSRHAGYRLAEHRLASGPGALAQAFGI
MLDHHGLPIDRPPFWIQSGSSPQRVASTPRIGISRGQEFLWRFVIPGHPAVSGRTPRLVTE
>Mature_221_residues
MDGVGTIVDTSEIQLDPARALPRDWFARPAVEVARDLLGAILVSMVGGELVAGVLVEVEAYGGPEDPASHAARYRNGPAR
VMWGPPGHAYVYRAYGVYPCCNIVTDPDGTAGAVLLRAAMPLAGHAIMRQRRERSRHAGYRLAEHRLASGPGALAQAFGI
MLDHHGLPIDRPPFWIQSGSSPQRVASTPRIGISRGQEFLWRFVIPGHPAVSGRTPRLVTE

Specific function: Unknown

COG id: COG2094

COG function: function code L; 3-methyladenine DNA glycosylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the DNA glycosylase MPG family [H]

Homologues:

Organism=Homo sapiens, GI62632769, Length=162, Percent_Identity=41.9753086419753, Blast_Score=97, Evalue=1e-20,
Organism=Homo sapiens, GI62632771, Length=162, Percent_Identity=41.9753086419753, Blast_Score=97, Evalue=2e-20,
Organism=Homo sapiens, GI62632765, Length=162, Percent_Identity=41.9753086419753, Blast_Score=97, Evalue=2e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011034
- InterPro:   IPR003180 [H]

Pfam domain/function: PF02245 Pur_DNA_glyco [H]

EC number: 3.2.2.-

Molecular weight: Translated: 23840; Mature: 23840

Theoretical pI: Translated: 9.11; Mature: 9.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDGVGTIVDTSEIQLDPARALPRDWFARPAVEVARDLLGAILVSMVGGELVAGVLVEVEA
CCCCCCEEECCCEEECHHHHCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEC
YGGPEDPASHAARYRNGPARVMWGPPGHAYVYRAYGVYPCCNIVTDPDGTAGAVLLRAAM
CCCCCCHHHHHHHHCCCCCEEEECCCCCEEEEEECCCCCCCCEEECCCCCHHHHHHHHHC
PLAGHAIMRQRRERSRHAGYRLAEHRLASGPGALAQAFGIMLDHHGLPIDRPPFWIQSGS
CHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCEEECCC
SPQRVASTPRIGISRGQEFLWRFVIPGHPAVSGRTPRLVTE
CCHHHHCCCCCCHHCCHHEEEEEECCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MDGVGTIVDTSEIQLDPARALPRDWFARPAVEVARDLLGAILVSMVGGELVAGVLVEVEA
CCCCCCEEECCCEEECHHHHCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEC
YGGPEDPASHAARYRNGPARVMWGPPGHAYVYRAYGVYPCCNIVTDPDGTAGAVLLRAAM
CCCCCCHHHHHHHHCCCCCEEEECCCCCEEEEEECCCCCCCCEEECCCCCHHHHHHHHHC
PLAGHAIMRQRRERSRHAGYRLAEHRLASGPGALAQAFGIMLDHHGLPIDRPPFWIQSGS
CHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCEEECCC
SPQRVASTPRIGISRGQEFLWRFVIPGHPAVSGRTPRLVTE
CCHHHHCCCCCCHHCCHHEEEEEECCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA