Definition Thermomicrobium roseum DSM 5159 chromosome, complete genome.
Accession NC_011959
Length 2,003,006

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The map label for this gene is 221633488

Identifier: 221633488

GI number: 221633488

Start: 1490279

End: 1491241

Strand: Reverse

Name: 221633488

Synonym: trd_1510

Alternate gene names: NA

Gene position: 1491241-1490279 (Counterclockwise)

Preceding gene: 221633489

Following gene: 221633487

Centisome position: 74.45

GC content: 67.08

Gene sequence:

>963_bases
TTGCAACTGGTCAGTTTCGCGCTGGTGGTTCTCTCGGTCCGTGCGATCGTGCGGGCCTGGCGTGCCCGACACCAACTCTT
TGCTGAGCCGGTGACCGCTCAACAACTGGCGGTGCTCGTGGAATTAGCGCTTTTCGTGCTCGTACCGATCAGTGTCCTCG
CGCACGAACTCGGACACGCGGTCGCGGTGTGGCTTTCCGGTGGACGCGTGATCGGCTTCGGGTACCTCCTATTTCTCGGC
TGGGTCGAGTACACAGGCGTGACGAACCCGATCGCGCAGTTCTGGATCGCCTCGAGCGGCAATCTCGTGAGTTTGTTCCT
CGCACTCGTCGCCATCGGGGCTGGCCTCTTCGCTCCGCTGCGCCGGCCGGTCGCCGCGCTGCTCTTGCCGGCCGGAGGCA
TGATCCTGGCGACCACGCTGGTGTTCTACCCTGCACTCGATCTCGCGAGCGGTTTGCGGGGTGACTGGACGCAGCTTTAC
AGTGGGCCGAGATCGGCCGCTCTCGTGCTCGGGGTACTGCATGGGGCGCTCCTACTCACTGGTTTCGCAGTATGGCGGAG
TCGGTGGCTCCGCTGGCGCGTCTCGGCGCGGATCGGTCGGCCGTGGCGGCTGGACGAGCACGACCGGCGACTGCTCGCCT
GGCGGCAACTGGCTGAGACCGCGGAGGAACTCGGGAAGCATGACGCGTCGCTGGCGGTCTCCGTTCAGGAGAACGGAGGG
AGGCCCGAACTGCACCTTTCCTGGCGAGGAGCGAAGGGCCAGCGCTCGTTGCGGGCACGCATCGGTGAGCGGCCGGATGT
GTTGGAGGTCGAAGCGCTGGCGGGGCAGCCGCCCGCGTTACGGGCAAGTTGGCGGGCACTCGTTCCGCCTGAAGCGCTCT
TCGCCGGCCCGTCGCCTTTCCCCGCTCTCTTGCACCGCTTGCGCGCCGCGGCGGATGCGCTCGAGCCGGTGGGGGAGGAA
TGA

Upstream 100 bases:

>100_bases
GTCTCTGGGCGTACTCCGCGCCTCGTGACGGAGTAGACTGGAGAGAGCAGGACCAGGCGATCCTGCTGGACCGGACCGTT
TCATGTGGAGTTTCCCGGCT

Downstream 100 bases:

>100_bases
CATGCGACGGTGGTGGCGGCGCGATCGTGACCAGGATGAACGACCAGCCGTAGACCGACCGACCAACCAGCCCGAGCGGC
CGGTCCGGGAGGCAGAGCGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 320; Mature: 320

Protein sequence:

>320_residues
MQLVSFALVVLSVRAIVRAWRARHQLFAEPVTAQQLAVLVELALFVLVPISVLAHELGHAVAVWLSGGRVIGFGYLLFLG
WVEYTGVTNPIAQFWIASSGNLVSLFLALVAIGAGLFAPLRRPVAALLLPAGGMILATTLVFYPALDLASGLRGDWTQLY
SGPRSAALVLGVLHGALLLTGFAVWRSRWLRWRVSARIGRPWRLDEHDRRLLAWRQLAETAEELGKHDASLAVSVQENGG
RPELHLSWRGAKGQRSLRARIGERPDVLEVEALAGQPPALRASWRALVPPEALFAGPSPFPALLHRLRAAADALEPVGEE

Sequences:

>Translated_320_residues
MQLVSFALVVLSVRAIVRAWRARHQLFAEPVTAQQLAVLVELALFVLVPISVLAHELGHAVAVWLSGGRVIGFGYLLFLG
WVEYTGVTNPIAQFWIASSGNLVSLFLALVAIGAGLFAPLRRPVAALLLPAGGMILATTLVFYPALDLASGLRGDWTQLY
SGPRSAALVLGVLHGALLLTGFAVWRSRWLRWRVSARIGRPWRLDEHDRRLLAWRQLAETAEELGKHDASLAVSVQENGG
RPELHLSWRGAKGQRSLRARIGERPDVLEVEALAGQPPALRASWRALVPPEALFAGPSPFPALLHRLRAAADALEPVGEE
>Mature_320_residues
MQLVSFALVVLSVRAIVRAWRARHQLFAEPVTAQQLAVLVELALFVLVPISVLAHELGHAVAVWLSGGRVIGFGYLLFLG
WVEYTGVTNPIAQFWIASSGNLVSLFLALVAIGAGLFAPLRRPVAALLLPAGGMILATTLVFYPALDLASGLRGDWTQLY
SGPRSAALVLGVLHGALLLTGFAVWRSRWLRWRVSARIGRPWRLDEHDRRLLAWRQLAETAEELGKHDASLAVSVQENGG
RPELHLSWRGAKGQRSLRARIGERPDVLEVEALAGQPPALRASWRALVPPEALFAGPSPFPALLHRLRAAADALEPVGEE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34817; Mature: 34817

Theoretical pI: Translated: 11.08; Mature: 11.08

Prosite motif: PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
0.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
0.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQLVSFALVVLSVRAIVRAWRARHQLFAEPVTAQQLAVLVELALFVLVPISVLAHELGHA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VAVWLSGGRVIGFGYLLFLGWVEYTGVTNPIAQFWIASSGNLVSLFLALVAIGAGLFAPL
EEEEECCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
RRPVAALLLPAGGMILATTLVFYPALDLASGLRGDWTQLYSGPRSAALVLGVLHGALLLT
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHH
GFAVWRSRWLRWRVSARIGRPWRLDEHDRRLLAWRQLAETAEELGKHDASLAVSVQENGG
HHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCC
RPELHLSWRGAKGQRSLRARIGERPDVLEVEALAGQPPALRASWRALVPPEALFAGPSPF
CCEEEEEECCCCCHHHHHHHCCCCCCCEEEHHHCCCCCCHHHCCHHCCCCHHHHCCCCCH
PALLHRLRAAADALEPVGEE
HHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MQLVSFALVVLSVRAIVRAWRARHQLFAEPVTAQQLAVLVELALFVLVPISVLAHELGHA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VAVWLSGGRVIGFGYLLFLGWVEYTGVTNPIAQFWIASSGNLVSLFLALVAIGAGLFAPL
EEEEECCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
RRPVAALLLPAGGMILATTLVFYPALDLASGLRGDWTQLYSGPRSAALVLGVLHGALLLT
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHH
GFAVWRSRWLRWRVSARIGRPWRLDEHDRRLLAWRQLAETAEELGKHDASLAVSVQENGG
HHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCC
RPELHLSWRGAKGQRSLRARIGERPDVLEVEALAGQPPALRASWRALVPPEALFAGPSPF
CCEEEEEECCCCCHHHHHHHCCCCCCCEEEHHHCCCCCCHHHCCHHCCCCHHHHCCCCCH
PALLHRLRAAADALEPVGEE
HHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA