Definition Thermomicrobium roseum DSM 5159 chromosome, complete genome.
Accession NC_011959
Length 2,003,006

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The map label for this gene is 221633438

Identifier: 221633438

GI number: 221633438

Start: 1448190

End: 1448786

Strand: Reverse

Name: 221633438

Synonym: trd_1460

Alternate gene names: NA

Gene position: 1448786-1448190 (Counterclockwise)

Preceding gene: 221633439

Following gene: 221633437

Centisome position: 72.33

GC content: 63.15

Gene sequence:

>597_bases
ATGGTCCTGCCGAACCAGATCGATCGTGTCGCAGTCTTTTTCGATATGTCCAACCTCTATTTCGTCGCACGCGATCTCGG
GGTACGGATCGATTATGCCCGGCTCCTGGAGTTTCTCGTCGCGGGGCGACGGCTGGTCTGTGCCTACGCGTACGTGACCC
TGGCTGGCGAGGAGTCGAGCGCGGTGCCGTTCCTCACCTGGCTGCGCCGCAACGGGTTCCGGGTGGTCACTCGGACACTG
CGGCGTGGGAGTGACGGAGCGCTGCGCGGAGACCTCGATTTGGAGATGGCGGTGGACGTCTTGCTGCAAACACCGCACGT
CGATGTGATCGTCCTGGTGACTGGCGATGGTGAGTACTGCTACCTGGTGGAGACGGTGCAGCGCCTGGGCCGACGAGTGG
AGATCGCTTCTGCCCCACGCAACACGGCGGTGGAATTGATGGAACTCGCTGACTACTACGTCGATCTCGAGGTGAATCTG
CGCCATTTCAGTCAGCCGCGCCCACCGGCCGCGGGCCGCGTGCGCCCCGAACCGGAGCATGGCGAAGAAGAGGTCTGGCA
GGAGCAGGAGCTGGCTGATGACGATCTCGATCGCTGA

Upstream 100 bases:

>100_bases
CCATGCCCCCGGGCTGGTGACGATGGTCGATCTCCCCATCATCACTGTTCGTTCGTGATTCGCGTGCTCGCTGGATTGAC
GGTACGAGGGGGTCGCTTCG

Downstream 100 bases:

>100_bases
CGTCCTGCCCAGGCGCGAGGCGCTCCTCACCGAACTCCGCACTCTGGTCGAGCTGGAGTCCCCCAGCACCGACAAGATAG
CGGTCGATCGTCTCGTCGCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 198; Mature: 198

Protein sequence:

>198_residues
MVLPNQIDRVAVFFDMSNLYFVARDLGVRIDYARLLEFLVAGRRLVCAYAYVTLAGEESSAVPFLTWLRRNGFRVVTRTL
RRGSDGALRGDLDLEMAVDVLLQTPHVDVIVLVTGDGEYCYLVETVQRLGRRVEIASAPRNTAVELMELADYYVDLEVNL
RHFSQPRPPAAGRVRPEPEHGEEEVWQEQELADDDLDR

Sequences:

>Translated_198_residues
MVLPNQIDRVAVFFDMSNLYFVARDLGVRIDYARLLEFLVAGRRLVCAYAYVTLAGEESSAVPFLTWLRRNGFRVVTRTL
RRGSDGALRGDLDLEMAVDVLLQTPHVDVIVLVTGDGEYCYLVETVQRLGRRVEIASAPRNTAVELMELADYYVDLEVNL
RHFSQPRPPAAGRVRPEPEHGEEEVWQEQELADDDLDR
>Mature_198_residues
MVLPNQIDRVAVFFDMSNLYFVARDLGVRIDYARLLEFLVAGRRLVCAYAYVTLAGEESSAVPFLTWLRRNGFRVVTRTL
RRGSDGALRGDLDLEMAVDVLLQTPHVDVIVLVTGDGEYCYLVETVQRLGRRVEIASAPRNTAVELMELADYYVDLEVNL
RHFSQPRPPAAGRVRPEPEHGEEEVWQEQELADDDLDR

Specific function: Unknown

COG id: COG1432

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22539; Mature: 22539

Theoretical pI: Translated: 4.51; Mature: 4.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVLPNQIDRVAVFFDMSNLYFVARDLGVRIDYARLLEFLVAGRRLVCAYAYVTLAGEESS
CCCCCCCCEEEEEEECCCCEEEEECCCCEECHHHHHHHHHCCCHHEEEEEEEEEECCCCC
AVPFLTWLRRNGFRVVTRTLRRGSDGALRGDLDLEMAVDVLLQTPHVDVIVLVTGDGEYC
CCHHHHHHHCCCHHHHHHHHHCCCCCCEECCCCHHHHHHHHHCCCCCCEEEEEECCCCEE
YLVETVQRLGRRVEIASAPRNTAVELMELADYYVDLEVNLRHFSQPRPPAAGRVRPEPEH
EHHHHHHHHCCEEEECCCCCHHHHHHHHHHHHEEEEEEEHHHCCCCCCCCCCCCCCCCCC
GEEEVWQEQELADDDLDR
CHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MVLPNQIDRVAVFFDMSNLYFVARDLGVRIDYARLLEFLVAGRRLVCAYAYVTLAGEESS
CCCCCCCCEEEEEEECCCCEEEEECCCCEECHHHHHHHHHCCCHHEEEEEEEEEECCCCC
AVPFLTWLRRNGFRVVTRTLRRGSDGALRGDLDLEMAVDVLLQTPHVDVIVLVTGDGEYC
CCHHHHHHHCCCHHHHHHHHHCCCCCCEECCCCHHHHHHHHHCCCCCCEEEEEECCCCEE
YLVETVQRLGRRVEIASAPRNTAVELMELADYYVDLEVNLRHFSQPRPPAAGRVRPEPEH
EHHHHHHHHCCEEEECCCCCHHHHHHHHHHHHEEEEEEEHHHCCCCCCCCCCCCCCCCCC
GEEEVWQEQELADDDLDR
CHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA