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The map label for this gene is 221633348

Identifier: 221633348

GI number: 221633348

Start: 1355724

End: 1357919

Strand: Reverse

Name: 221633348

Synonym: trd_1367

Alternate gene names: NA

Gene position: 1357919-1355724 (Counterclockwise)

Preceding gene: 221633354

Following gene: 221633346

Centisome position: 67.79

GC content: 66.35

Gene sequence:

>2196_bases
ATGACTGAGCATCGCTTGCGTTGGCTGAGCCGCGGACAAGCGCGCAGCCACTCGGAAGGACCAGGCGTCGGGGGTAGCGC
GGTCCCGTTTTGGGTCGAGTGGTTGCTCGATCTGGGAGTGCGTGCTGGCCCCGAGCAGCTGGACTGGACCGAGGTGGCGA
GGATTAGCTGCCAGGTACTGTCAGCGCAGATCGTCCGGATCTGGCGCATGACGGCGCGGAGCGAGCTGGTACTGCAGGCA
CAGGCGGGCGATGGTCAGGAAGCGCCTTCTTCCCCGCGGCCGATACCGACCGGATTCGACCGGCTCGCTCCTGGGATGCT
GGCTGTCGGTCCGCTGGATGGTCCGCTTGCAGAGAGTTTCTTGACCGCAGAGGAGAGGGTGGCCTTGCGGCGGTCTGGTG
TGCAGCACGTTCTGGTCGCACCGCTTCATGCCGGGGGAACGACGGTGGGGCGGCTCGACGTGGCACGCACCAGGCCAGAG
CCGTTTTCGGCCGAGGATCGCTCACGGGCCGTCGTCCTGGCTGAGCTTGTCGGCTTGTTGGTGGGGAGAGTCGCGACGGT
GGGCGAGCCGCTGCCTTCCGACCAGGCAGCGGAGCTGGTCCACCAGGCGCTGGCGTTACCAGGGAGCGCGCGCGAGGTAC
TGGCGCGGATTGTGGAGGCGCTGCGCTGGCGCGTTCGAGCGAGCGCAGTTCTGTTCCTCCGCTGGCTGCCTGAGGAACGC
GTCGAACTTCTCACGACGTCGACCGCCCCTGAACTGATGCCCGATCCGACCGCGTTGACTTCCTCCCGCGTCCTCATGCT
CGTGCGGAATGTGTTGGAGCAAGGCCGGCCACAGCGGTGGCGGGCCGGCTCCGGCAGCGAACTGATTTTCCCTGTCGTCA
TGGCCGAGACTCTCGCCTTTCCACTGCCGGTCATCGGTACCGCTGCACGCGGCGTTCTCGTTCTGGCTTGGCGAGATCGC
GATGAAGGGGGCGAAGAGCGTGTCCAGGTTCTCGTCCCTGAACTCGCCCCTCGCTTGCTTACGCTCGTCGGATTCGTCGA
GCGGGAGGAGCGAGCGATCGCTGACCGGGCCAGTATCGAGCGTCGCGAGCTTCTCCTCGATGCTTTGTTGCGTACCAGTG
GACCGACCGTCATCGCTGAGGCGCTCTGGCGCCGTGCGCAGAGCGTCTCCGGGGTCGTCGCGGCAGGTGTTCTTTTGGAG
GGGGACGAGCGTTTCGTCTGGTTCTGGGTTGTCCAGGAGGAACCGCGCGTGCTCGTCGAGACGGATCGGGAACGCTCCCC
GGCCCAACTGGCTCTGTCCCAGCGCCCGGTAGCCGTGTTCGGCCCAGATCGTTGGGCGACGTGGCAAGCGGTGGTACCGC
TCGAACTGGAGCAGGCCTGGGTCGTGACTGCCCCGCTGGGGACAGTGCGTGGTAGCCTGGTCATCGTGACGCATGAGGAA
CAGGCCACAGCGGAAGCGGAACGGCTCGTCACCGACCTGGTTTCCCTCTTGGAGGCGCGGGCGGATGGCCTCGTTACTCG
TCTGGATCGTGATCTCGCGGAGATGCGTCGTCAACGCGCCTTGGGCGACGCGTTGGTCCAGCATGCGGAGGAATGGCGGA
CGCTCGTCGATGCCATCCATACGACGGTCCTGCAAGGACTCGCCTCGTCGCTGTACCGGATCGAGTTGACGACGCGGCGT
GTCGACCAGCAGCCGGTGGAGCAGACGCTCCTCGAACTGGAACAGGTGCGCGATATCCTAGCTAGCCACATCGCAGCACT
GCGGGATGCCATTTTTCGCCAGCGCCCCGCTTCGCTGGAGCATCTCGGGCTCGCGGCTGCCCTGCGGGACTATGCCGCAC
AATTGCAGCGCGCGCATGCCCTGGACGTGGACTTCTTGGGGGAGTTGTGGCAGCGTCCTGACCGGCACGTCGAGGAATCG
CTCTTCGGACTGGTTCGGCTTTTGGTGGAGCGGACACGGCTGCCGCTCGGTGTGCGCAAGCTGGTGATCCGGCTCCGACA
GCGGACGGATGGCACGATCGTGCTCGTCGTCGCTGACGATGCTCATTGGGCTGGGCGCGCTGCCTGGGAGGAGTTACCCG
GTGCTGCACTGGCCAGCGAGTGGATTCGATTGCTCGGCGGCACGCTGCACGTGGCGGGACTGCCGGACGGTGGGACAGCC
ATCGCGTGCACGGTGCCGCTCAGGCGGGCGTTGTGA

Upstream 100 bases:

>100_bases
CCTCCCGGGCAGATCGGTACCGATGATACTCGCTCGGCGTTGGGACACTGTCGATCGTTTCGGTGAGTGCAGTGGATGAA
CTGCACGCGAAGGGCCCGGC

Downstream 100 bases:

>100_bases
GCACCATCGGGAAGATCAGGACGTTCCGGTGATGACAACTGAGCGAGACTTGGAGTTGAATGGAGCAAGAAGCGAGCAGA
GCCGGACCAGTGATGGGCAG

Product: GAF domain-containing protein

Products: NA

Alternate protein names: Signal Transduction Histidine Kinase

Number of amino acids: Translated: 731; Mature: 730

Protein sequence:

>731_residues
MTEHRLRWLSRGQARSHSEGPGVGGSAVPFWVEWLLDLGVRAGPEQLDWTEVARISCQVLSAQIVRIWRMTARSELVLQA
QAGDGQEAPSSPRPIPTGFDRLAPGMLAVGPLDGPLAESFLTAEERVALRRSGVQHVLVAPLHAGGTTVGRLDVARTRPE
PFSAEDRSRAVVLAELVGLLVGRVATVGEPLPSDQAAELVHQALALPGSAREVLARIVEALRWRVRASAVLFLRWLPEER
VELLTTSTAPELMPDPTALTSSRVLMLVRNVLEQGRPQRWRAGSGSELIFPVVMAETLAFPLPVIGTAARGVLVLAWRDR
DEGGEERVQVLVPELAPRLLTLVGFVEREERAIADRASIERRELLLDALLRTSGPTVIAEALWRRAQSVSGVVAAGVLLE
GDERFVWFWVVQEEPRVLVETDRERSPAQLALSQRPVAVFGPDRWATWQAVVPLELEQAWVVTAPLGTVRGSLVIVTHEE
QATAEAERLVTDLVSLLEARADGLVTRLDRDLAEMRRQRALGDALVQHAEEWRTLVDAIHTTVLQGLASSLYRIELTTRR
VDQQPVEQTLLELEQVRDILASHIAALRDAIFRQRPASLEHLGLAAALRDYAAQLQRAHALDVDFLGELWQRPDRHVEES
LFGLVRLLVERTRLPLGVRKLVIRLRQRTDGTIVLVVADDAHWAGRAAWEELPGAALASEWIRLLGGTLHVAGLPDGGTA
IACTVPLRRAL

Sequences:

>Translated_731_residues
MTEHRLRWLSRGQARSHSEGPGVGGSAVPFWVEWLLDLGVRAGPEQLDWTEVARISCQVLSAQIVRIWRMTARSELVLQA
QAGDGQEAPSSPRPIPTGFDRLAPGMLAVGPLDGPLAESFLTAEERVALRRSGVQHVLVAPLHAGGTTVGRLDVARTRPE
PFSAEDRSRAVVLAELVGLLVGRVATVGEPLPSDQAAELVHQALALPGSAREVLARIVEALRWRVRASAVLFLRWLPEER
VELLTTSTAPELMPDPTALTSSRVLMLVRNVLEQGRPQRWRAGSGSELIFPVVMAETLAFPLPVIGTAARGVLVLAWRDR
DEGGEERVQVLVPELAPRLLTLVGFVEREERAIADRASIERRELLLDALLRTSGPTVIAEALWRRAQSVSGVVAAGVLLE
GDERFVWFWVVQEEPRVLVETDRERSPAQLALSQRPVAVFGPDRWATWQAVVPLELEQAWVVTAPLGTVRGSLVIVTHEE
QATAEAERLVTDLVSLLEARADGLVTRLDRDLAEMRRQRALGDALVQHAEEWRTLVDAIHTTVLQGLASSLYRIELTTRR
VDQQPVEQTLLELEQVRDILASHIAALRDAIFRQRPASLEHLGLAAALRDYAAQLQRAHALDVDFLGELWQRPDRHVEES
LFGLVRLLVERTRLPLGVRKLVIRLRQRTDGTIVLVVADDAHWAGRAAWEELPGAALASEWIRLLGGTLHVAGLPDGGTA
IACTVPLRRAL
>Mature_730_residues
TEHRLRWLSRGQARSHSEGPGVGGSAVPFWVEWLLDLGVRAGPEQLDWTEVARISCQVLSAQIVRIWRMTARSELVLQAQ
AGDGQEAPSSPRPIPTGFDRLAPGMLAVGPLDGPLAESFLTAEERVALRRSGVQHVLVAPLHAGGTTVGRLDVARTRPEP
FSAEDRSRAVVLAELVGLLVGRVATVGEPLPSDQAAELVHQALALPGSAREVLARIVEALRWRVRASAVLFLRWLPEERV
ELLTTSTAPELMPDPTALTSSRVLMLVRNVLEQGRPQRWRAGSGSELIFPVVMAETLAFPLPVIGTAARGVLVLAWRDRD
EGGEERVQVLVPELAPRLLTLVGFVEREERAIADRASIERRELLLDALLRTSGPTVIAEALWRRAQSVSGVVAAGVLLEG
DERFVWFWVVQEEPRVLVETDRERSPAQLALSQRPVAVFGPDRWATWQAVVPLELEQAWVVTAPLGTVRGSLVIVTHEEQ
ATAEAERLVTDLVSLLEARADGLVTRLDRDLAEMRRQRALGDALVQHAEEWRTLVDAIHTTVLQGLASSLYRIELTTRRV
DQQPVEQTLLELEQVRDILASHIAALRDAIFRQRPASLEHLGLAAALRDYAAQLQRAHALDVDFLGELWQRPDRHVEESL
FGLVRLLVERTRLPLGVRKLVIRLRQRTDGTIVLVVADDAHWAGRAAWEELPGAALASEWIRLLGGTLHVAGLPDGGTAI
ACTVPLRRAL

Specific function: Unknown

COG id: COG4585

COG function: function code T; Signal transduction histidine kinase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 80513; Mature: 80381

Theoretical pI: Translated: 5.96; Mature: 5.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTEHRLRWLSRGQARSHSEGPGVGGSAVPFWVEWLLDLGVRAGPEQLDWTEVARISCQVL
CCCHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHH
SAQIVRIWRMTARSELVLQAQAGDGQEAPSSPRPIPTGFDRLAPGMLAVGPLDGPLAESF
HHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCCCCHHHHCCCCEEECCCCCHHHHHH
LTAEERVALRRSGVQHVLVAPLHAGGTTVGRLDVARTRPEPFSAEDRSRAVVLAELVGLL
HHHHHHHHHHHCCCCEEEEEEECCCCCCEEEEEHHCCCCCCCCCCCHHHHHHHHHHHHHH
VGRVATVGEPLPSDQAAELVHQALALPGSAREVLARIVEALRWRVRASAVLFLRWLPEER
HHHHHHCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
VELLTTSTAPELMPDPTALTSSRVLMLVRNVLEQGRPQRWRAGSGSELIFPVVMAETLAF
HHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHC
PLPVIGTAARGVLVLAWRDRDEGGEERVQVLVPELAPRLLTLVGFVEREERAIADRASIE
CCCHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RRELLLDALLRTSGPTVIAEALWRRAQSVSGVVAAGVLLEGDERFVWFWVVQEEPRVLVE
HHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHCEEEECCCEEEEEEEEECCCCEEEE
TDRERSPAQLALSQRPVAVFGPDRWATWQAVVPLELEQAWVVTAPLGTVRGSLVIVTHEE
CCCCCCCHHHHHCCCCEEEECCCCCCCEEEEEEEECCCCEEEECCHHHHCCCEEEEECCH
QATAEAERLVTDLVSLLEARADGLVTRLDRDLAEMRRQRALGDALVQHAEEWRTLVDAIH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TTVLQGLASSLYRIELTTRRVDQQPVEQTLLELEQVRDILASHIAALRDAIFRQRPASLE
HHHHHHHHHHHEEEEEHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
HLGLAAALRDYAAQLQRAHALDVDFLGELWQRPDRHVEESLFGLVRLLVERTRLPLGVRK
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHH
LVIRLRQRTDGTIVLVVADDAHWAGRAAWEELPGAALASEWIRLLGGTLHVAGLPDGGTA
HHHHHHHCCCCEEEEEEECCCCCCCHHHHHHCCCHHHHHHHHHHHCCCEEEEECCCCCCE
IACTVPLRRAL
EEEECCHHHCC
>Mature Secondary Structure 
TEHRLRWLSRGQARSHSEGPGVGGSAVPFWVEWLLDLGVRAGPEQLDWTEVARISCQVL
CCHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHH
SAQIVRIWRMTARSELVLQAQAGDGQEAPSSPRPIPTGFDRLAPGMLAVGPLDGPLAESF
HHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCCCCHHHHCCCCEEECCCCCHHHHHH
LTAEERVALRRSGVQHVLVAPLHAGGTTVGRLDVARTRPEPFSAEDRSRAVVLAELVGLL
HHHHHHHHHHHCCCCEEEEEEECCCCCCEEEEEHHCCCCCCCCCCCHHHHHHHHHHHHHH
VGRVATVGEPLPSDQAAELVHQALALPGSAREVLARIVEALRWRVRASAVLFLRWLPEER
HHHHHHCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
VELLTTSTAPELMPDPTALTSSRVLMLVRNVLEQGRPQRWRAGSGSELIFPVVMAETLAF
HHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHC
PLPVIGTAARGVLVLAWRDRDEGGEERVQVLVPELAPRLLTLVGFVEREERAIADRASIE
CCCHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RRELLLDALLRTSGPTVIAEALWRRAQSVSGVVAAGVLLEGDERFVWFWVVQEEPRVLVE
HHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHCEEEECCCEEEEEEEEECCCCEEEE
TDRERSPAQLALSQRPVAVFGPDRWATWQAVVPLELEQAWVVTAPLGTVRGSLVIVTHEE
CCCCCCCHHHHHCCCCEEEECCCCCCCEEEEEEEECCCCEEEECCHHHHCCCEEEEECCH
QATAEAERLVTDLVSLLEARADGLVTRLDRDLAEMRRQRALGDALVQHAEEWRTLVDAIH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TTVLQGLASSLYRIELTTRRVDQQPVEQTLLELEQVRDILASHIAALRDAIFRQRPASLE
HHHHHHHHHHHEEEEEHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
HLGLAAALRDYAAQLQRAHALDVDFLGELWQRPDRHVEESLFGLVRLLVERTRLPLGVRK
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHH
LVIRLRQRTDGTIVLVVADDAHWAGRAAWEELPGAALASEWIRLLGGTLHVAGLPDGGTA
HHHHHHHCCCCEEEEEEECCCCCCCHHHHHHCCCHHHHHHHHHHHCCCEEEEECCCCCCE
IACTVPLRRAL
EEEECCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA